RNA–Protein interactions for RNA: ENST00000550872.1

CHMP1A-209, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-209ENST00000550872 FAM110AQ9BQ89 295 aa12.08□□□□□ -0.48
CHMP1A-209ENST00000550872 MAP6D1Q9H9H5 199 aa12.08□□□□□ -0.48
CHMP1A-209ENST00000550872 KCNIP2Q9NS61 270 aa12.08□□□□□ -0.48
CHMP1A-209ENST00000550872 RNF24Q9Y225 148 aa12.08□□□□□ -0.48
CHMP1A-209ENST00000550872 hCG_2014768A0A024R1R8 64 aa12.07□□□□□ -0.48
CHMP1A-209ENST00000550872 RNF222A6NCQ9 220 aa12.07□□□□□ -0.48
CHMP1A-209ENST00000550872 DEFB131AP59861 70 aa12.07□□□□□ -0.48
CHMP1A-209ENST00000550872 FAM24BQ8N5W8 94 aa12.07□□□□□ -0.48
CHMP1A-209ENST00000550872 ASCL2Q99929 193 aa12.07□□□□□ -0.48
CHMP1A-209ENST00000550872 RSG1Q9BU20 258 aa12.07□□□□□ -0.48
CHMP1A-209ENST00000550872 ARPC5O15511 151 aa12.06□□□□□ -0.48
CHMP1A-209ENST00000550872 ZNF688P0C7X2 276 aa12.06□□□□□ -0.48
CHMP1A-209ENST00000550872 RPL7P18124 248 aaKnown RBP12.06□□□□□ -0.48
CHMP1A-209ENST00000550872 APRG1Q8IVJ8 170 aa12.06□□□□□ -0.48
CHMP1A-209ENST00000550872 CITED4Q96RK1 184 aa12.06□□□□□ -0.48
CHMP1A-209ENST00000550872 PARD6GQ9BYG4 376 aaPredicted RBP12.06□□□□□ -0.48
CHMP1A-209ENST00000550872 ATF4P18848 351 aaPredicted RBP12.05□□□□□ -0.48
CHMP1A-209ENST00000550872 ZNF266Q14584 549 aa12.05□□□□□ -0.48
CHMP1A-209ENST00000550872 GCSAMLQ5JQS6 135 aa12.05□□□□□ -0.48
CHMP1A-209ENST00000550872 GATAD1Q8WUU5 269 aa12.05□□□□□ -0.48
CHMP1A-209ENST00000550872 MFFQ9GZY8 342 aa12.05□□□□□ -0.48
CHMP1A-209ENST00000550872 RBMY1BA6NDE4 496 aaKnown RBP12.04□□□□□ -0.48
CHMP1A-209ENST00000550872 RBMY1EA6NEQ0 496 aaKnown RBP12.04□□□□□ -0.48
CHMP1A-209ENST00000550872 RBMY1DP0C7P1 496 aaKnown RBP12.04□□□□□ -0.48
CHMP1A-209ENST00000550872 ID1P41134 155 aa12.04□□□□□ -0.48
CHMP1A-209ENST00000550872 MEOX2P50222 304 aa12.04□□□□□ -0.48
CHMP1A-209ENST00000550872 SNRPD3P62318 126 aaKnown RBP12.04□□□□□ -0.48
CHMP1A-209ENST00000550872 ZNF124Q15973 351 aa12.04□□□□□ -0.48
CHMP1A-209ENST00000550872 PSMG4Q5JS54 123 aa12.04□□□□□ -0.48
CHMP1A-209ENST00000550872 FFAR4Q5NUL3 377 aa12.04□□□□□ -0.48
CHMP1A-209ENST00000550872 MORN5Q5VZ52 161 aa12.04□□□□□ -0.48
CHMP1A-209ENST00000550872 SBSPONQ8IVN8 264 aa12.04□□□□□ -0.48
CHMP1A-209ENST00000550872 ST6GAL2Q96JF0 529 aa12.04□□□□□ -0.48
CHMP1A-209ENST00000550872 SEPSECSQ9HD40 501 aaKnown RBP12.04□□□□□ -0.48
CHMP1A-209ENST00000550872 TRAV5A0A0B4J249 113 aa12.03□□□□□ -0.48
CHMP1A-209ENST00000550872 LINC00322Q6ZN03 302 aaPredicted RBP12.03□□□□□ -0.48
CHMP1A-209ENST00000550872 BPIFA4PQ86YQ2 179 aa12.03□□□□□ -0.48
CHMP1A-209ENST00000550872 HSD17B11Q8NBQ5 300 aa12.03□□□□□ -0.48
CHMP1A-209ENST00000550872 OR11H4Q8NGC9 324 aa12.03□□□□□ -0.48
CHMP1A-209ENST00000550872 RFNGQ9Y644 331 aa12.03□□□□□ -0.48
CHMP1A-209ENST00000550872 LOC102724200A0A096LPH7 203 aaPredicted RBP12.02□□□□□ -0.49
CHMP1A-209ENST00000550872 BORCS7-ASMTA0A0B4J1R7 106 aa12.02□□□□□ -0.49
CHMP1A-209ENST00000550872 HAGHQ16775 308 aa12.02□□□□□ -0.49
CHMP1A-209ENST00000550872 FAM78BQ5VT40 261 aa12.02□□□□□ -0.49
CHMP1A-209ENST00000550872 SAMD13Q5VXD3 122 aa12.02□□□□□ -0.49
CHMP1A-209ENST00000550872 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.02□□□□□ -0.49
CHMP1A-209ENST00000550872 C16orf92Q96LL3 132 aa12.02□□□□□ -0.49
CHMP1A-209ENST00000550872 C17orf77Q96MU5 243 aa12.02□□□□□ -0.49
CHMP1A-209ENST00000550872 LINC00052Q96N35 136 aa12.02□□□□□ -0.49
CHMP1A-209ENST00000550872 TIMM9Q9Y5J7 89 aa12.02□□□□□ -0.49
CHMP1A-209ENST00000550872 HMSDA8MTL9 139 aa12.01□□□□□ -0.49
CHMP1A-209ENST00000550872 ISLRO14498 428 aa12.01□□□□□ -0.49
CHMP1A-209ENST00000550872 SOCS3O14543 225 aa12.01□□□□□ -0.49
CHMP1A-209ENST00000550872 MRPS12O15235 138 aaKnown RBP12.01□□□□□ -0.49
CHMP1A-209ENST00000550872 RPL35AP18077 110 aaKnown RBP12.01□□□□□ -0.49
CHMP1A-209ENST00000550872 PSMB3P49720 205 aa12.01□□□□□ -0.49
CHMP1A-209ENST00000550872 RPL7L1Q6DKI1 246 aaKnown RBP12.01□□□□□ -0.49
CHMP1A-209ENST00000550872 LRRC20Q8TCA0 184 aa12.01□□□□□ -0.49
CHMP1A-209ENST00000550872 AGRNO00468 2067 aa12□□□□□ -0.49
CHMP1A-209ENST00000550872 A0A087X0K7 114 aa12□□□□□ -0.49
CHMP1A-209ENST00000550872 KNCNA6PVL3 124 aa12□□□□□ -0.49
CHMP1A-209ENST00000550872 TAAR5O14804 337 aa12□□□□□ -0.49
CHMP1A-209ENST00000550872 SNRPCP09234 159 aaKnown RBP12□□□□□ -0.49
CHMP1A-209ENST00000550872 NHLRC4P0CG21 123 aaPredicted RBP12□□□□□ -0.49
CHMP1A-209ENST00000550872 ATP6V0CP27449 155 aa12□□□□□ -0.49
CHMP1A-209ENST00000550872 SPATA31B1PQ5VZV4 182 aa12□□□□□ -0.49
CHMP1A-209ENST00000550872 TCTE3Q8IZS6 198 aa12□□□□□ -0.49
CHMP1A-209ENST00000550872 A0A1B0GVG6 124 aa11.99□□□□□ -0.49
CHMP1A-209ENST00000550872 ZNF345Q14585 488 aa11.99□□□□□ -0.49
CHMP1A-209ENST00000550872 ACOT6Q3I5F7 207 aaPredicted RBP11.99□□□□□ -0.49
CHMP1A-209ENST00000550872 ACTL10Q5JWF8 245 aa11.99□□□□□ -0.49
CHMP1A-209ENST00000550872 MIR17HGQ75NE6 70 aa11.99□□□□□ -0.49
CHMP1A-209ENST00000550872 AKAP14Q86UN6 197 aa11.99□□□□□ -0.49
CHMP1A-209ENST00000550872 STHQ8IWL8 128 aa11.99□□□□□ -0.49
CHMP1A-209ENST00000550872 KCNRGQ8N5I3 272 aa11.99□□□□□ -0.49
CHMP1A-209ENST00000550872 MRPL32Q9BYC8 188 aaKnown RBP11.99□□□□□ -0.49
CHMP1A-209ENST00000550872 FUT9Q9Y231 359 aa11.99□□□□□ -0.49
CHMP1A-209ENST00000550872 A0A0D9SG52 128 aa11.98□□□□□ -0.49
CHMP1A-209ENST00000550872 H3BTX0 84 aa11.98□□□□□ -0.49
CHMP1A-209ENST00000550872 JTBO76095 146 aa11.98□□□□□ -0.49
CHMP1A-209ENST00000550872 M6PRP20645 277 aa11.98□□□□□ -0.49
CHMP1A-209ENST00000550872 RHOBP62745 196 aa11.98□□□□□ -0.49
CHMP1A-209ENST00000550872 IGFL4Q6B9Z1 124 aa11.98□□□□□ -0.49
CHMP1A-209ENST00000550872 GNPNAT1Q96EK6 184 aaPredicted RBP11.98□□□□□ -0.49
CHMP1A-209ENST00000550872 ARPC5LQ9BPX5 153 aa11.98□□□□□ -0.49
CHMP1A-209ENST00000550872 PSMG3Q9BT73 122 aaPredicted RBP11.98□□□□□ -0.49
CHMP1A-209ENST00000550872 SLC25A2Q9BXI2 301 aa11.98□□□□□ -0.49
CHMP1A-209ENST00000550872 TMEM14CQ9P0S9 112 aa11.98□□□□□ -0.49
CHMP1A-209ENST00000550872 TRAV8-2A0A0B4J237 113 aa11.97□□□□□ -0.49
CHMP1A-209ENST00000550872 H3BQ15 152 aa11.97□□□□□ -0.49
CHMP1A-209ENST00000550872 CXCL2P19875 107 aa11.97□□□□□ -0.49
CHMP1A-209ENST00000550872 APOC4P55056 127 aa11.97□□□□□ -0.49
CHMP1A-209ENST00000550872 RAB2AP61019 212 aa11.97□□□□□ -0.49
CHMP1A-209ENST00000550872 LCN15Q6UWW0 184 aa11.97□□□□□ -0.49
CHMP1A-209ENST00000550872 OR2G3Q8NGZ4 309 aa11.97□□□□□ -0.49
CHMP1A-209ENST00000550872 C20orf173Q96LM9 149 aa11.97□□□□□ -0.49
CHMP1A-209ENST00000550872 SH3BGRL3Q9H299 93 aa11.97□□□□□ -0.49
CHMP1A-209ENST00000550872 HRH4Q9H3N8 390 aa11.97□□□□□ -0.49
CHMP1A-209ENST00000550872 ZMAT4Q9H898 229 aa11.97□□□□□ -0.49
CHMP1A-209ENST00000550872 CYTL1Q9NRR1 136 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms