RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 SLC39A9Q9NUM3 307 aa9.97□□□□□ -0.81
NUP188-211ENST00000550219 BOLA1Q9Y3E2 137 aa9.97□□□□□ -0.81
NUP188-211ENST00000550219 PXMP4Q9Y6I8 212 aa9.97□□□□□ -0.81
NUP188-211ENST00000550219 DNAH1Q9P2D7 4330 aa9.96□□□□□ -0.81
NUP188-211ENST00000550219 CXorf65A6NEN9 183 aa9.96□□□□□ -0.82
NUP188-211ENST00000550219 YIF1AO95070 293 aa9.96□□□□□ -0.82
NUP188-211ENST00000550219 IL4P05112 153 aa9.96□□□□□ -0.82
NUP188-211ENST00000550219 C8orf88P0DMB2 117 aa9.96□□□□□ -0.82
NUP188-211ENST00000550219 USF2Q15853 346 aaPredicted RBP9.96□□□□□ -0.82
NUP188-211ENST00000550219 DEFB135Q30KP9 77 aa9.96□□□□□ -0.82
NUP188-211ENST00000550219 LYSTQ99698 3801 aa9.96□□□□□ -0.82
NUP188-211ENST00000550219 SPAG8Q99932 426 aaPredicted RBP9.96□□□□□ -0.82
NUP188-211ENST00000550219 DAZ1Q9NQZ3 744 aaKnown RBP9.96□□□□□ -0.82
NUP188-211ENST00000550219 RFNGQ9Y644 331 aa9.96□□□□□ -0.82
NUP188-211ENST00000550219 U3KQE9 123 aa9.96□□□□□ -0.82
NUP188-211ENST00000550219 A0A0J9YWU9 116 aa9.95□□□□□ -0.82
NUP188-211ENST00000550219 SPP1P10451 314 aa9.95□□□□□ -0.82
NUP188-211ENST00000550219 TPT1P13693 172 aaKnown RBP9.95□□□□□ -0.82
NUP188-211ENST00000550219 RPL35AP18077 110 aaKnown RBP9.95□□□□□ -0.82
NUP188-211ENST00000550219 CRYBB3P26998 211 aa9.95□□□□□ -0.82
NUP188-211ENST00000550219 APOC4P55056 127 aa9.95□□□□□ -0.82
NUP188-211ENST00000550219 LYZP61626 148 aa9.95□□□□□ -0.82
NUP188-211ENST00000550219 SERF2P84101 59 aa9.95□□□□□ -0.82
NUP188-211ENST00000550219 PATE2Q6UY27 113 aa9.95□□□□□ -0.82
NUP188-211ENST00000550219 Q6ZRG5 221 aa9.95□□□□□ -0.82
NUP188-211ENST00000550219 BAP18Q8IXM2 172 aa9.95□□□□□ -0.82
NUP188-211ENST00000550219 SH3BGRL3Q9H299 93 aa9.95□□□□□ -0.82
NUP188-211ENST00000550219 ELOA3CA0A087WX78 387 aaPredicted RBP9.94□□□□□ -0.82
NUP188-211ENST00000550219 TSPAN4O14817 238 aa9.94□□□□□ -0.82
NUP188-211ENST00000550219 HYPMO75409 117 aa9.94□□□□□ -0.82
NUP188-211ENST00000550219 SEC11BP0C7V7 166 aa9.94□□□□□ -0.82
NUP188-211ENST00000550219 TMEM37Q8WXS4 190 aa9.94□□□□□ -0.82
NUP188-211ENST00000550219 ST8SIA2Q92186 375 aa9.94□□□□□ -0.82
NUP188-211ENST00000550219 METTL26Q96S19 204 aa9.94□□□□□ -0.82
NUP188-211ENST00000550219 SLC25A32Q9H2D1 315 aa9.94□□□□□ -0.82
NUP188-211ENST00000550219 DNAJC4Q9NNZ3 241 aa9.94□□□□□ -0.82
NUP188-211ENST00000550219 IGKV3-7A0A075B6H7 116 aa9.93□□□□□ -0.82
NUP188-211ENST00000550219 IGHV3-49A0A0A0MS15 119 aa9.93□□□□□ -0.82
NUP188-211ENST00000550219 IGHV7-4-1A0A0J9YVY3 117 aa9.93□□□□□ -0.82
NUP188-211ENST00000550219 OR4C46A6NHA9 309 aa9.93□□□□□ -0.82
NUP188-211ENST00000550219 SPRY2O43597 315 aa9.93□□□□□ -0.82
NUP188-211ENST00000550219 ORM2P19652 201 aa9.93□□□□□ -0.82
NUP188-211ENST00000550219 NPPCP23582 126 aa9.93□□□□□ -0.82
NUP188-211ENST00000550219 TFPI2P48307 235 aa9.93□□□□□ -0.82
NUP188-211ENST00000550219 ODF3L2Q3SX64 289 aa9.93□□□□□ -0.82
NUP188-211ENST00000550219 FFAR4Q5NUL3 377 aa9.93□□□□□ -0.82
NUP188-211ENST00000550219 OR1L4Q8NGR5 311 aa9.93□□□□□ -0.82
NUP188-211ENST00000550219 OR1B1Q8NGR6 318 aa9.93□□□□□ -0.82
NUP188-211ENST00000550219 GATAD1Q8WUU5 269 aa9.93□□□□□ -0.82
NUP188-211ENST00000550219 PBDC1Q9BVG4 233 aa9.93□□□□□ -0.82
NUP188-211ENST00000550219 VSIRQ9H7M9 311 aa9.93□□□□□ -0.82
NUP188-211ENST00000550219 PLA2G2EQ9NZK7 142 aa9.93□□□□□ -0.82
NUP188-211ENST00000550219 SMPXQ9UHP9 88 aa9.93□□□□□ -0.82
NUP188-211ENST00000550219 RABAC1Q9UI14 185 aa9.93□□□□□ -0.82
NUP188-211ENST00000550219 ALMS1Q8TCU4 4167 aa9.93□□□□□ -0.82
NUP188-211ENST00000550219 LY6G6CO95867 125 aa9.92□□□□□ -0.82
NUP188-211ENST00000550219 OR5G3P0C626 314 aa9.92□□□□□ -0.82
NUP188-211ENST00000550219 M6PRP20645 277 aa9.92□□□□□ -0.82
NUP188-211ENST00000550219 ACOT6Q3I5F7 207 aaPredicted RBP9.92□□□□□ -0.82
NUP188-211ENST00000550219 GCSAMLQ5JQS6 135 aa9.92□□□□□ -0.82
NUP188-211ENST00000550219 PFDN5Q99471 154 aa9.92□□□□□ -0.82
NUP188-211ENST00000550219 SHANK2-AS3Q9BTD1 123 aa9.92□□□□□ -0.82
NUP188-211ENST00000550219 SLC25A39Q9BZJ4 359 aaPredicted RBP9.92□□□□□ -0.82
NUP188-211ENST00000550219 DOK5Q9P104 306 aa9.92□□□□□ -0.82
NUP188-211ENST00000550219 HIGD1AQ9Y241 93 aa9.92□□□□□ -0.82
NUP188-211ENST00000550219 EPPK1P58107 5090 aaKnown RBP9.91□□□□□ -0.82
NUP188-211ENST00000550219 IGHV3OR16-13A0A075B7E8 117 aa9.91□□□□□ -0.82
NUP188-211ENST00000550219 IGHV3-74A0A0B4J1X5 117 aa9.91□□□□□ -0.82
NUP188-211ENST00000550219 H3BRN7 92 aa9.91□□□□□ -0.82
NUP188-211ENST00000550219 CHEK1O14757 476 aa9.91□□□□□ -0.82
NUP188-211ENST00000550219 BUB3O43684 328 aa9.91□□□□□ -0.82
NUP188-211ENST00000550219 COX7A2P2O60397 106 aa9.91□□□□□ -0.82
NUP188-211ENST00000550219 MBP02144 154 aa9.91□□□□□ -0.82
NUP188-211ENST00000550219 APOHP02749 345 aaPredicted RBP9.91□□□□□ -0.82
NUP188-211ENST00000550219 BMI1P35226 326 aa9.91□□□□□ -0.82
NUP188-211ENST00000550219 C10orf113Q5VZT2 155 aa9.91□□□□□ -0.82
NUP188-211ENST00000550219 Q6ZWC4 215 aa9.91□□□□□ -0.82
NUP188-211ENST00000550219 S100A7AQ86SG5 101 aa9.91□□□□□ -0.82
NUP188-211ENST00000550219 APRG1Q8IVJ8 170 aa9.91□□□□□ -0.82
NUP188-211ENST00000550219 LINC00476Q8WZB0 136 aa9.91□□□□□ -0.82
NUP188-211ENST00000550219 PHYHIPLQ96FC7 376 aa9.91□□□□□ -0.82
NUP188-211ENST00000550219 PFDN2Q9UHV9 154 aa9.91□□□□□ -0.82
NUP188-211ENST00000550219 A0A1W2PS18 150 aa9.9□□□□□ -0.82
NUP188-211ENST00000550219 NUPR2A6NF83 97 aa9.9□□□□□ -0.82
NUP188-211ENST00000550219 ZNF98A6NK75 572 aa9.9□□□□□ -0.82
NUP188-211ENST00000550219 S100A7P31151 101 aa9.9□□□□□ -0.82
NUP188-211ENST00000550219 RAB2AP61019 212 aa9.9□□□□□ -0.82
NUP188-211ENST00000550219 ZNF124Q15973 351 aa9.9□□□□□ -0.82
NUP188-211ENST00000550219 TMEM41BQ5BJD5 291 aa9.9□□□□□ -0.82
NUP188-211ENST00000550219 C1orf194Q5T5A4 169 aa9.9□□□□□ -0.82
NUP188-211ENST00000550219 EIF5AL1Q6IS14 154 aaKnown RBP9.9□□□□□ -0.82
NUP188-211ENST00000550219 C16orf54Q6UWD8 224 aa9.9□□□□□ -0.82
NUP188-211ENST00000550219 LINC00305Q7Z4B0 112 aa9.9□□□□□ -0.82
NUP188-211ENST00000550219 RPP25LQ8N5L8 163 aaKnown RBP9.9□□□□□ -0.82
NUP188-211ENST00000550219 TMED6Q8WW62 240 aa9.9□□□□□ -0.82
NUP188-211ENST00000550219 RNF2Q99496 336 aa9.9□□□□□ -0.82
NUP188-211ENST00000550219 RHPN1-AS1Q9BWJ2 59 aa9.9□□□□□ -0.82
NUP188-211ENST00000550219 MRPL32Q9BYC8 188 aaKnown RBP9.9□□□□□ -0.82
NUP188-211ENST00000550219 SEPSECSQ9HD40 501 aaKnown RBP9.9□□□□□ -0.82
NUP188-211ENST00000550219 RPRMQ9NS64 109 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms