RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 SLC45A2Q9UMX9 530 aa10.81□□□□□ -0.68
RAB5C-205ENST00000550013 TRAV12-2A0A075B6T6 113 aa10.8□□□□□ -0.68
RAB5C-205ENST00000550013 PLAC8L1A1L4L8 177 aa10.8□□□□□ -0.68
RAB5C-205ENST00000550013 F5H768 121 aa10.8□□□□□ -0.68
RAB5C-205ENST00000550013 DUSP14O95147 198 aaKnown RBP10.8□□□□□ -0.68
RAB5C-205ENST00000550013 CFDP00746 253 aaPredicted RBP10.8□□□□□ -0.68
RAB5C-205ENST00000550013 TMED4Q7Z7H5 227 aa10.8□□□□□ -0.68
RAB5C-205ENST00000550013 C6orf223Q8N319 242 aa10.8□□□□□ -0.68
RAB5C-205ENST00000550013 BPIFCQ8NFQ6 507 aa10.8□□□□□ -0.68
RAB5C-205ENST00000550013 OR4D5Q8NGN0 318 aa10.8□□□□□ -0.68
RAB5C-205ENST00000550013 OR1B1Q8NGR6 318 aa10.8□□□□□ -0.68
RAB5C-205ENST00000550013 SLC25A39Q9BZJ4 359 aaPredicted RBP10.8□□□□□ -0.68
RAB5C-205ENST00000550013 RABL2AQ9UBK7 228 aaPredicted RBP10.8□□□□□ -0.68
RAB5C-205ENST00000550013 RABL2BQ9UNT1 228 aa10.8□□□□□ -0.68
RAB5C-205ENST00000550013 DUXBA0A1W2PPF3 345 aa10.79□□□□□ -0.68
RAB5C-205ENST00000550013 WRBO00258 174 aa10.79□□□□□ -0.68
RAB5C-205ENST00000550013 CDK2AP2O75956 126 aa10.79□□□□□ -0.68
RAB5C-205ENST00000550013 TSPOP30536 169 aa10.79□□□□□ -0.68
RAB5C-205ENST00000550013 FGL1Q08830 312 aa10.79□□□□□ -0.68
RAB5C-205ENST00000550013 GPR141Q7Z602 305 aa10.79□□□□□ -0.68
RAB5C-205ENST00000550013 MAPKAPK5-AS1Q8N8E1 139 aa10.79□□□□□ -0.68
RAB5C-205ENST00000550013 TMEM147Q9BVK8 224 aa10.79□□□□□ -0.68
RAB5C-205ENST00000550013 DNAH5Q8TE73 4624 aa10.78□□□□□ -0.68
RAB5C-205ENST00000550013 BOLA2-SMG1P6H3BVE0 249 aa10.78□□□□□ -0.68
RAB5C-205ENST00000550013 MED6O75586 246 aa10.78□□□□□ -0.68
RAB5C-205ENST00000550013 PRB4P10163 310 aaPredicted RBP10.78□□□□□ -0.68
RAB5C-205ENST00000550013 ZNF738Q8NE65 137 aa10.78□□□□□ -0.68
RAB5C-205ENST00000550013 DYNC2LI1Q8TCX1 351 aa10.78□□□□□ -0.68
RAB5C-205ENST00000550013 GPR82Q96P67 336 aa10.78□□□□□ -0.68
RAB5C-205ENST00000550013 CCDC59Q9P031 241 aaKnown RBP10.78□□□□□ -0.68
RAB5C-205ENST00000550013 RSL24D1Q9UHA3 163 aaKnown RBP10.78□□□□□ -0.68
RAB5C-205ENST00000550013 LINC00588Q9Y4M8 146 aa10.78□□□□□ -0.68
RAB5C-205ENST00000550013 H3BP45 60 aa10.77□□□□□ -0.69
RAB5C-205ENST00000550013 H3BRN7 92 aa10.77□□□□□ -0.69
RAB5C-205ENST00000550013 SYNGR2O43760 224 aa10.77□□□□□ -0.69
RAB5C-205ENST00000550013 ATP5G1P05496 136 aa10.77□□□□□ -0.69
RAB5C-205ENST00000550013 SLC25A6P12236 298 aa10.77□□□□□ -0.69
RAB5C-205ENST00000550013 VAMP1P23763 118 aa10.77□□□□□ -0.69
RAB5C-205ENST00000550013 ATP5G3P48201 142 aa10.77□□□□□ -0.69
RAB5C-205ENST00000550013 B2MP61769 119 aa10.77□□□□□ -0.69
RAB5C-205ENST00000550013 AKR1C1Q04828 323 aa10.77□□□□□ -0.69
RAB5C-205ENST00000550013 SPANXN5Q5MJ07 72 aa10.77□□□□□ -0.69
RAB5C-205ENST00000550013 ACOT7LQ6ZUV0 252 aa10.77□□□□□ -0.69
RAB5C-205ENST00000550013 RNF141Q8WVD5 230 aa10.77□□□□□ -0.69
RAB5C-205ENST00000550013 CIB3Q96Q77 187 aaPredicted RBP10.77□□□□□ -0.69
RAB5C-205ENST00000550013 SOSTQ9BQB4 213 aa10.77□□□□□ -0.69
RAB5C-205ENST00000550013 CCL18P55774 89 aa10.76□□□□□ -0.69
RAB5C-205ENST00000550013 RPP30P78346 268 aaKnown RBP10.76□□□□□ -0.69
RAB5C-205ENST00000550013 HIST1H1AQ02539 215 aaPredicted RBP10.76□□□□□ -0.69
RAB5C-205ENST00000550013 TMEM128Q5BJH2 165 aa10.76□□□□□ -0.69
RAB5C-205ENST00000550013 LRTM2Q8N967 370 aa10.76□□□□□ -0.69
RAB5C-205ENST00000550013 LINC01587Q99440 93 aa10.76□□□□□ -0.69
RAB5C-205ENST00000550013 SHANK2-AS3Q9BTD1 123 aa10.76□□□□□ -0.69
RAB5C-205ENST00000550013 MRPS26Q9BYN8 205 aaKnown RBP10.76□□□□□ -0.69
RAB5C-205ENST00000550013 PIGBOS1A0A0B4J2F0 54 aa10.75□□□□□ -0.69
RAB5C-205ENST00000550013 FABP12A6NFH5 140 aa10.75□□□□□ -0.69
RAB5C-205ENST00000550013 CBY3A6NI87 242 aa10.75□□□□□ -0.69
RAB5C-205ENST00000550013 HOXB5P09067 269 aa10.75□□□□□ -0.69
RAB5C-205ENST00000550013 HTN1P15515 57 aa10.75□□□□□ -0.69
RAB5C-205ENST00000550013 TNFSF8P32971 234 aa10.75□□□□□ -0.69
RAB5C-205ENST00000550013 RHOBP62745 196 aa10.75□□□□□ -0.69
RAB5C-205ENST00000550013 OR8A1Q8NGG7 326 aa10.75□□□□□ -0.69
RAB5C-205ENST00000550013 HIGD1AQ9Y241 93 aa10.75□□□□□ -0.69
RAB5C-205ENST00000550013 SMCO3A2RU48 225 aa10.74□□□□□ -0.69
RAB5C-205ENST00000550013 CXCL3P19876 107 aa10.74□□□□□ -0.69
RAB5C-205ENST00000550013 S100A7P31151 101 aa10.74□□□□□ -0.69
RAB5C-205ENST00000550013 TAS2R60P59551 318 aa10.74□□□□□ -0.69
RAB5C-205ENST00000550013 PPP1R1AQ13522 171 aa10.74□□□□□ -0.69
RAB5C-205ENST00000550013 CYP2G1PQ6ZSU1 146 aa10.74□□□□□ -0.69
RAB5C-205ENST00000550013 TMEM144Q7Z5S9 345 aa10.74□□□□□ -0.69
RAB5C-205ENST00000550013 TMEM256Q8N2U0 113 aa10.74□□□□□ -0.69
RAB5C-205ENST00000550013 UHRF2Q96PU4 802 aa10.74□□□□□ -0.69
RAB5C-205ENST00000550013 STRAPQ9Y3F4 350 aaKnown RBP10.74□□□□□ -0.69
RAB5C-205ENST00000550013 HYPMO75409 117 aa10.73□□□□□ -0.69
RAB5C-205ENST00000550013 SFT2D2O95562 160 aa10.73□□□□□ -0.69
RAB5C-205ENST00000550013 IL5P05113 134 aa10.73□□□□□ -0.69
RAB5C-205ENST00000550013 RPL7P18124 248 aaKnown RBP10.73□□□□□ -0.69
RAB5C-205ENST00000550013 FAUP35544 74 aaKnown RBP10.73□□□□□ -0.69
RAB5C-205ENST00000550013 RAP2BP61225 183 aa10.73□□□□□ -0.69
RAB5C-205ENST00000550013 CLINT1Q14677 625 aa10.73□□□□□ -0.69
RAB5C-205ENST00000550013 PSG3Q16557 428 aa10.73□□□□□ -0.69
RAB5C-205ENST00000550013 SSX7Q7RTT5 188 aa10.73□□□□□ -0.69
RAB5C-205ENST00000550013 SPATA12Q7Z6I5 190 aa10.73□□□□□ -0.69
RAB5C-205ENST00000550013 RAB2BQ8WUD1 216 aa10.73□□□□□ -0.69
RAB5C-205ENST00000550013 TRIM63Q969Q1 353 aa10.73□□□□□ -0.69
RAB5C-205ENST00000550013 C16orf74Q96GX8 76 aa10.73□□□□□ -0.69
RAB5C-205ENST00000550013 KRTAP1-5Q9BYS1 174 aa10.73□□□□□ -0.69
RAB5C-205ENST00000550013 SLIRPQ9GZT3 109 aaKnown RBP10.73□□□□□ -0.69
RAB5C-205ENST00000550013 NOP10Q9NPE3 64 aaKnown RBP10.73□□□□□ -0.69
RAB5C-205ENST00000550013 PPP1R14DQ9NXH3 145 aa10.73□□□□□ -0.69
RAB5C-205ENST00000550013 TIMM8BQ9Y5J9 83 aaPredicted RBP10.73□□□□□ -0.69
RAB5C-205ENST00000550013 A0A087X0K7 114 aa10.72□□□□□ -0.69
RAB5C-205ENST00000550013 OR5G3P0C626 314 aa10.72□□□□□ -0.69
RAB5C-205ENST00000550013 LINC00869P0C866 280 aa10.72□□□□□ -0.69
RAB5C-205ENST00000550013 CCNKO75909 580 aa10.71□□□□□ -0.69
RAB5C-205ENST00000550013 PLP1P60201 277 aa10.71□□□□□ -0.69
RAB5C-205ENST00000550013 KIR3DS1Q14943 382 aa10.71□□□□□ -0.69
RAB5C-205ENST00000550013 Q8N1X5 172 aa10.71□□□□□ -0.69
RAB5C-205ENST00000550013 TOMM5Q8N4H5 51 aa10.71□□□□□ -0.69
RAB5C-205ENST00000550013 LRRC20Q8TCA0 184 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms