RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 C6orf223Q8N319 242 aa9.56□□□□□ -0.88
TROAP-211ENST00000549891 OR11H7Q8NGC8 314 aa9.56□□□□□ -0.88
TROAP-211ENST00000549891 HSPG2P98160 4391 aa9.55□□□□□ -0.88
TROAP-211ENST00000549891 F5H768 121 aa9.55□□□□□ -0.88
TROAP-211ENST00000549891 NUDT3O95989 172 aa9.55□□□□□ -0.88
TROAP-211ENST00000549891 ATP5G1P05496 136 aa9.55□□□□□ -0.88
TROAP-211ENST00000549891 ORM2P19652 201 aa9.55□□□□□ -0.88
TROAP-211ENST00000549891 FAUP35544 74 aaKnown RBP9.55□□□□□ -0.88
TROAP-211ENST00000549891 ATP5G3P48201 142 aa9.55□□□□□ -0.88
TROAP-211ENST00000549891 TNP2Q05952 138 aa9.55□□□□□ -0.88
TROAP-211ENST00000549891 TMEM128Q5BJH2 165 aa9.55□□□□□ -0.88
TROAP-211ENST00000549891 TMEM256Q8N2U0 113 aa9.55□□□□□ -0.88
TROAP-211ENST00000549891 CRXO43186 299 aaPredicted RBP9.54□□□□□ -0.88
TROAP-211ENST00000549891 SMIM18P0DKX4 95 aa9.54□□□□□ -0.88
TROAP-211ENST00000549891 AKR1C1Q04828 323 aa9.54□□□□□ -0.88
TROAP-211ENST00000549891 SPCS2Q15005 226 aa9.54□□□□□ -0.88
TROAP-211ENST00000549891 TMED4Q7Z7H5 227 aa9.54□□□□□ -0.88
TROAP-211ENST00000549891 LRTM2Q8N967 370 aa9.54□□□□□ -0.88
TROAP-211ENST00000549891 ZNF738Q8NE65 137 aa9.54□□□□□ -0.88
TROAP-211ENST00000549891 ZNRF2Q8NHG8 242 aa9.54□□□□□ -0.88
TROAP-211ENST00000549891 KRTAP4-5Q9BYR2 181 aa9.54□□□□□ -0.88
TROAP-211ENST00000549891 PPP1R14DQ9NXH3 145 aa9.54□□□□□ -0.88
TROAP-211ENST00000549891 CCDC59Q9P031 241 aaKnown RBP9.54□□□□□ -0.88
TROAP-211ENST00000549891 CBY3A6NI87 242 aa9.53□□□□□ -0.88
TROAP-211ENST00000549891 BOLA2-SMG1P6H3BVE0 249 aa9.53□□□□□ -0.88
TROAP-211ENST00000549891 SYNGR2O43760 224 aa9.53□□□□□ -0.88
TROAP-211ENST00000549891 RPL7P18124 248 aaKnown RBP9.53□□□□□ -0.88
TROAP-211ENST00000549891 RAP2BP61225 183 aa9.53□□□□□ -0.88
TROAP-211ENST00000549891 FGL1Q08830 312 aa9.53□□□□□ -0.88
TROAP-211ENST00000549891 CLINT1Q14677 625 aa9.53□□□□□ -0.88
TROAP-211ENST00000549891 S100A7AQ86SG5 101 aa9.53□□□□□ -0.88
TROAP-211ENST00000549891 BAP18Q8IXM2 172 aa9.53□□□□□ -0.88
TROAP-211ENST00000549891 C16orf74Q96GX8 76 aa9.53□□□□□ -0.88
TROAP-211ENST00000549891 C17orf77Q96MU5 243 aa9.53□□□□□ -0.88
TROAP-211ENST00000549891 LINC01587Q99440 93 aa9.53□□□□□ -0.88
TROAP-211ENST00000549891 MRPS26Q9BYN8 205 aaKnown RBP9.53□□□□□ -0.88
TROAP-211ENST00000549891 FABP12A6NFH5 140 aa9.52□□□□□ -0.89
TROAP-211ENST00000549891 PRSS46E5RG02 174 aa9.52□□□□□ -0.89
TROAP-211ENST00000549891 WRBO00258 174 aa9.52□□□□□ -0.89
TROAP-211ENST00000549891 PRM2P04554 102 aa9.52□□□□□ -0.89
TROAP-211ENST00000549891 VAMP1P23763 118 aa9.52□□□□□ -0.89
TROAP-211ENST00000549891 GATA2P23769 480 aaPredicted RBP9.52□□□□□ -0.89
TROAP-211ENST00000549891 TAS2R60P59551 318 aa9.52□□□□□ -0.89
TROAP-211ENST00000549891 AP3S2P59780 193 aa9.52□□□□□ -0.89
TROAP-211ENST00000549891 RHOBP62745 196 aa9.52□□□□□ -0.89
TROAP-211ENST00000549891 SPANXN5Q5MJ07 72 aa9.52□□□□□ -0.89
TROAP-211ENST00000549891 RNF182Q8N6D2 247 aa9.52□□□□□ -0.89
TROAP-211ENST00000549891 MAPKAPK5-AS1Q8N8E1 139 aa9.52□□□□□ -0.89
TROAP-211ENST00000549891 RAB2BQ8WUD1 216 aa9.52□□□□□ -0.89
TROAP-211ENST00000549891 RNF24Q9Y225 148 aa9.52□□□□□ -0.89
TROAP-211ENST00000549891 STRAPQ9Y3F4 350 aaKnown RBP9.52□□□□□ -0.89
TROAP-211ENST00000549891 TIMM8BQ9Y5J9 83 aaPredicted RBP9.52□□□□□ -0.89
TROAP-211ENST00000549891 TRAV12-2A0A075B6T6 113 aa9.51□□□□□ -0.89
TROAP-211ENST00000549891 TRAV8-2A0A0B4J237 113 aa9.51□□□□□ -0.89
TROAP-211ENST00000549891 PLAC8L1A1L4L8 177 aa9.51□□□□□ -0.89
TROAP-211ENST00000549891 H3BRN7 92 aa9.51□□□□□ -0.89
TROAP-211ENST00000549891 IL5P05113 134 aa9.51□□□□□ -0.89
TROAP-211ENST00000549891 AZU1P20160 251 aa9.51□□□□□ -0.89
TROAP-211ENST00000549891 HIST1H1AQ02539 215 aaPredicted RBP9.51□□□□□ -0.89
TROAP-211ENST00000549891 IGFL4Q6B9Z1 124 aa9.51□□□□□ -0.89
TROAP-211ENST00000549891 TMEM144Q7Z5S9 345 aa9.51□□□□□ -0.89
TROAP-211ENST00000549891 LRRC20Q8TCA0 184 aa9.51□□□□□ -0.89
TROAP-211ENST00000549891 DYNC2LI1Q8TCX1 351 aa9.51□□□□□ -0.89
TROAP-211ENST00000549891 SLC25A39Q9BZJ4 359 aaPredicted RBP9.51□□□□□ -0.89
TROAP-211ENST00000549891 HIGD1AQ9Y241 93 aa9.51□□□□□ -0.89
TROAP-211ENST00000549891 SMCO3A2RU48 225 aa9.5□□□□□ -0.89
TROAP-211ENST00000549891 HYPMO75409 117 aa9.5□□□□□ -0.89
TROAP-211ENST00000549891 HTN1P15515 57 aa9.5□□□□□ -0.89
TROAP-211ENST00000549891 SELENOTP62341 195 aa9.5□□□□□ -0.89
TROAP-211ENST00000549891 FCN2Q15485 313 aa9.5□□□□□ -0.89
TROAP-211ENST00000549891 TMEM182Q6ZP80 229 aaPredicted RBP9.5□□□□□ -0.89
TROAP-211ENST00000549891 ZNF493Q6ZR52 646 aa9.5□□□□□ -0.89
TROAP-211ENST00000549891 CYP2G1PQ6ZSU1 146 aa9.5□□□□□ -0.89
TROAP-211ENST00000549891 ACOT7LQ6ZUV0 252 aa9.5□□□□□ -0.89
TROAP-211ENST00000549891 TOMM5Q8N4H5 51 aa9.5□□□□□ -0.89
TROAP-211ENST00000549891 OR8A1Q8NGG7 326 aa9.5□□□□□ -0.89
TROAP-211ENST00000549891 OR10J6PQ8NGY7 276 aa9.5□□□□□ -0.89
TROAP-211ENST00000549891 BCL7BQ9BQE9 202 aa9.5□□□□□ -0.89
TROAP-211ENST00000549891 SLC25A21Q9BQT8 299 aaPredicted RBP9.5□□□□□ -0.89
TROAP-211ENST00000549891 SHANK2-AS3Q9BTD1 123 aa9.5□□□□□ -0.89
TROAP-211ENST00000549891 LINC00588Q9Y4M8 146 aa9.5□□□□□ -0.89
TROAP-211ENST00000549891 ADAP1O75689 374 aa9.49□□□□□ -0.89
TROAP-211ENST00000549891 OR5G3P0C626 314 aa9.49□□□□□ -0.89
TROAP-211ENST00000549891 CXCL3P19876 107 aa9.49□□□□□ -0.89
TROAP-211ENST00000549891 TNFSF8P32971 234 aa9.49□□□□□ -0.89
TROAP-211ENST00000549891 CDKN1BP46527 198 aa9.49□□□□□ -0.89
TROAP-211ENST00000549891 TMBIM6P55061 237 aa9.49□□□□□ -0.89
TROAP-211ENST00000549891 PSG3Q16557 428 aa9.49□□□□□ -0.89
TROAP-211ENST00000549891 TTC32Q5I0X7 151 aa9.49□□□□□ -0.89
TROAP-211ENST00000549891 SSX7Q7RTT5 188 aa9.49□□□□□ -0.89
TROAP-211ENST00000549891 RNF141Q8WVD5 230 aa9.49□□□□□ -0.89
TROAP-211ENST00000549891 SOSTQ9BQB4 213 aa9.49□□□□□ -0.89
TROAP-211ENST00000549891 A0A087X0K7 114 aa9.48□□□□□ -0.89
TROAP-211ENST00000549891 H3BP45 60 aa9.48□□□□□ -0.89
TROAP-211ENST00000549891 SFT2D2O95562 160 aa9.48□□□□□ -0.89
TROAP-211ENST00000549891 HOXB5P09067 269 aa9.48□□□□□ -0.89
TROAP-211ENST00000549891 LINC00869P0C866 280 aa9.48□□□□□ -0.89
TROAP-211ENST00000549891 PLP1P60201 277 aa9.48□□□□□ -0.89
TROAP-211ENST00000549891 TMEM263Q8WUH6 116 aaKnown RBP9.48□□□□□ -0.89
TROAP-211ENST00000549891 DEDD2Q8WXF8 326 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms