RNA–Protein interactions for RNA: ENST00000549578.5

VPS29-206, Transcript of VPS29, retromer complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS29, Length 1,523 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-206ENST00000549578 HELTA6NFD8 242 aa15.91■□□□□ 0.14
VPS29-206ENST00000549578 TFPI2P48307 235 aa15.91■□□□□ 0.14
VPS29-206ENST00000549578 RAB2AP61019 212 aa15.91■□□□□ 0.14
VPS29-206ENST00000549578 KPRPQ5T749 579 aaPredicted RBP15.91■□□□□ 0.14
VPS29-206ENST00000549578 SPATA31B1PQ5VZV4 182 aa15.91■□□□□ 0.14
VPS29-206ENST00000549578 ZNF256Q9Y2P7 627 aaPredicted RBP15.91■□□□□ 0.14
VPS29-206ENST00000549578 BOLA2-SMG1P6H3BVE0 249 aa15.9■□□□□ 0.14
VPS29-206ENST00000549578 CD5P06127 495 aa15.9■□□□□ 0.14
VPS29-206ENST00000549578 GP9P14770 177 aa15.9■□□□□ 0.14
VPS29-206ENST00000549578 SERF2P84101 59 aa15.9■□□□□ 0.14
VPS29-206ENST00000549578 ACOT6Q3I5F7 207 aaPredicted RBP15.9■□□□□ 0.14
VPS29-206ENST00000549578 STXBP6Q8NFX7 210 aa15.9■□□□□ 0.14
VPS29-206ENST00000549578 SPP1P10451 314 aa15.89■□□□□ 0.13
VPS29-206ENST00000549578 M6PRP20645 277 aa15.89■□□□□ 0.13
VPS29-206ENST00000549578 MIR17HGQ75NE6 70 aa15.89■□□□□ 0.13
VPS29-206ENST00000549578 PRR25Q96S07 402 aa15.89■□□□□ 0.13
VPS29-206ENST00000549578 SPAG8Q99932 426 aaPredicted RBP15.89■□□□□ 0.13
VPS29-206ENST00000549578 MS4A6AQ9H2W1 248 aa15.89■□□□□ 0.13
VPS29-206ENST00000549578 TPT1P13693 172 aaKnown RBP15.89■□□□□ 0.13
VPS29-206ENST00000549578 WFDC3Q8IUB2 231 aa15.89■□□□□ 0.13
VPS29-206ENST00000549578 BAP18Q8IXM2 172 aa15.89■□□□□ 0.13
VPS29-206ENST00000549578 STOML3Q8TAV4 291 aa15.89■□□□□ 0.13
VPS29-206ENST00000549578 FUT9Q9Y231 359 aa15.89■□□□□ 0.13
VPS29-206ENST00000549578 BOLA1Q9Y3E2 137 aa15.89■□□□□ 0.13
VPS29-206ENST00000549578 SMAD5-AS1Q9Y6J3 95 aa15.89■□□□□ 0.13
VPS29-206ENST00000549578 EIF3GO75821 320 aaKnown RBP eCLIP15.88■□□□□ 0.13
VPS29-206ENST00000549578 PRB2P02812 416 aaPredicted RBP15.88■□□□□ 0.13
VPS29-206ENST00000549578 GALR1P47211 349 aa15.88■□□□□ 0.13
VPS29-206ENST00000549578 EIF5AP63241 154 aaKnown RBP15.88■□□□□ 0.13
VPS29-206ENST00000549578 OR10G4Q8NGN3 311 aa15.88■□□□□ 0.13
VPS29-206ENST00000549578 OR10G9Q8NGN4 311 aa15.88■□□□□ 0.13
VPS29-206ENST00000549578 OR10G7Q8NGN6 311 aa15.88■□□□□ 0.13
VPS29-206ENST00000549578 GPR82Q96P67 336 aa15.88■□□□□ 0.13
VPS29-206ENST00000549578 MRPL32Q9BYC8 188 aaKnown RBP15.88■□□□□ 0.13
VPS29-206ENST00000549578 ZMAT5Q9UDW3 170 aaKnown RBP15.88■□□□□ 0.13
VPS29-206ENST00000549578 DNAH3Q8TD57 4116 aa15.87■□□□□ 0.13
VPS29-206ENST00000549578 DNASE2O00115 360 aaPredicted RBP15.87■□□□□ 0.13
VPS29-206ENST00000549578 RPL7P18124 248 aaKnown RBP15.87■□□□□ 0.13
VPS29-206ENST00000549578 RHOBP62745 196 aa15.87■□□□□ 0.13
VPS29-206ENST00000549578 PAFAH1B2P68402 229 aa15.87■□□□□ 0.13
VPS29-206ENST00000549578 FAM122CQ6P4D5 195 aa15.87■□□□□ 0.13
VPS29-206ENST00000549578 SLC51BQ86UW2 128 aa15.87■□□□□ 0.13
VPS29-206ENST00000549578 RNF24Q9Y225 148 aa15.87■□□□□ 0.13
VPS29-206ENST00000549578 MRPS12O15235 138 aaKnown RBP15.86■□□□□ 0.13
VPS29-206ENST00000549578 C4BPBP20851 252 aa15.86■□□□□ 0.13
VPS29-206ENST00000549578 TMEM41BQ5BJD5 291 aa15.86■□□□□ 0.13
VPS29-206ENST00000549578 RPP25LQ8N5L8 163 aaKnown RBP15.86■□□□□ 0.13
VPS29-206ENST00000549578 C17orf77Q96MU5 243 aa15.86■□□□□ 0.13
VPS29-206ENST00000549578 SLC25A2Q9BXI2 301 aa15.86■□□□□ 0.13
VPS29-206ENST00000549578 NRN1Q9NPD7 142 aa15.86■□□□□ 0.13
VPS29-206ENST00000549578 RPRMQ9NS64 109 aa15.86■□□□□ 0.13
VPS29-206ENST00000549578 OR4C46A6NHA9 309 aa15.85■□□□□ 0.13
VPS29-206ENST00000549578 MBP02144 154 aa15.85■□□□□ 0.13
VPS29-206ENST00000549578 SNRPCP09234 159 aaKnown RBP15.85■□□□□ 0.13
VPS29-206ENST00000549578 BPIFA4PQ86YQ2 179 aa15.85■□□□□ 0.13
VPS29-206ENST00000549578 DCANP1Q8TF63 244 aa15.85■□□□□ 0.13
VPS29-206ENST00000549578 TMED6Q8WW62 240 aa15.85■□□□□ 0.13
VPS29-206ENST00000549578 FAM167A-AS1Q96KT0 104 aa15.85■□□□□ 0.13
VPS29-206ENST00000549578 A0A1W2PPV4 95 aa15.84■□□□□ 0.13
VPS29-206ENST00000549578 CD7P09564 240 aa15.84■□□□□ 0.13
VPS29-206ENST00000549578 SEC11BP0C7V7 166 aa15.84■□□□□ 0.13
VPS29-206ENST00000549578 ATF4P18848 351 aaPredicted RBP15.84■□□□□ 0.13
VPS29-206ENST00000549578 AKR1C8PQ5T2L2 129 aa15.84■□□□□ 0.13
VPS29-206ENST00000549578 FAM24BQ8N5W8 94 aa15.84■□□□□ 0.13
VPS29-206ENST00000549578 PLA2G2EQ9NZK7 142 aa15.84■□□□□ 0.13
VPS29-206ENST00000549578 K7EQG2 157 aa15.84■□□□□ 0.13
VPS29-206ENST00000549578 PYYP10082 97 aa15.84■□□□□ 0.13
VPS29-206ENST00000549578 CD81P60033 236 aa15.84■□□□□ 0.13
VPS29-206ENST00000549578 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.84■□□□□ 0.13
VPS29-206ENST00000549578 GTSCR1Q86UQ5 136 aa15.84■□□□□ 0.13
VPS29-206ENST00000549578 AURKAIP1Q9NWT8 199 aaPredicted RBP15.84■□□□□ 0.13
VPS29-206ENST00000549578 TRAV2A0A0B4J234 112 aa15.83■□□□□ 0.12
VPS29-206ENST00000549578 HMGB3O15347 200 aaKnown RBP15.83■□□□□ 0.12
VPS29-206ENST00000549578 CDC34P49427 236 aaPredicted RBP15.83■□□□□ 0.12
VPS29-206ENST00000549578 H3BTX0 84 aa15.82■□□□□ 0.12
VPS29-206ENST00000549578 IGLC2P0DOY2 106 aa15.82■□□□□ 0.12
VPS29-206ENST00000549578 TMEM14CQ9P0S9 112 aa15.82■□□□□ 0.12
VPS29-206ENST00000549578 UBQLN2Q9UHD9 624 aa15.82■□□□□ 0.12
VPS29-206ENST00000549578 A0A087X0K7 114 aa15.81■□□□□ 0.12
VPS29-206ENST00000549578 H3BQ15 152 aa15.81■□□□□ 0.12
VPS29-206ENST00000549578 OR7C2O60412 319 aa15.81■□□□□ 0.12
VPS29-206ENST00000549578 TAS2R45P59539 299 aa15.81■□□□□ 0.12
VPS29-206ENST00000549578 SSX7Q7RTT5 188 aa15.81■□□□□ 0.12
VPS29-206ENST00000549578 RAB24Q969Q5 203 aa15.81■□□□□ 0.12
VPS29-206ENST00000549578 ZNF503Q96F45 646 aa15.81■□□□□ 0.12
VPS29-206ENST00000549578 ACTR3CQ9C0K3 210 aaPredicted RBP15.81■□□□□ 0.12
VPS29-206ENST00000549578 WFDC10AQ9H1F0 79 aa15.81■□□□□ 0.12
VPS29-206ENST00000549578 SOCS3O14543 225 aa15.8■□□□□ 0.12
VPS29-206ENST00000549578 ZNF688P0C7X2 276 aa15.8■□□□□ 0.12
VPS29-206ENST00000549578 ZNF726P1Q15940 193 aa15.8■□□□□ 0.12
VPS29-206ENST00000549578 ODF3L2Q3SX64 289 aa15.8■□□□□ 0.12
VPS29-206ENST00000549578 KHDC3LQ587J8 217 aa15.8■□□□□ 0.12
VPS29-206ENST00000549578 Q8N1Y9 231 aa15.8■□□□□ 0.12
VPS29-206ENST00000549578 PAXXQ9BUH6 204 aa15.8■□□□□ 0.12
VPS29-206ENST00000549578 OR51M1Q9H341 326 aa15.8■□□□□ 0.12
VPS29-206ENST00000549578 OR10J4P0C629 311 aa15.79■□□□□ 0.12
VPS29-206ENST00000549578 FHITP49789 147 aa15.79■□□□□ 0.12
VPS29-206ENST00000549578 MEOX2P50222 304 aa15.79■□□□□ 0.12
VPS29-206ENST00000549578 HRH4Q9H3N8 390 aa15.79■□□□□ 0.12
VPS29-206ENST00000549578 C19orf73Q9NVV2 129 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms