RNA–Protein interactions for RNA: ENST00000549347.1

RAPGEF3-220, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 4

Gene RAPGEF3, Length 573 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-220ENST00000549347 ASCL2Q99929 193 aa13.11□□□□□ -0.31
RAPGEF3-220ENST00000549347 SMIM3Q9BZL3 60 aa13.11□□□□□ -0.31
RAPGEF3-220ENST00000549347 SOCS3O14543 225 aa13.1□□□□□ -0.31
RAPGEF3-220ENST00000549347 ZNF688P0C7X2 276 aa13.1□□□□□ -0.31
RAPGEF3-220ENST00000549347 RPL7P18124 248 aaKnown RBP13.1□□□□□ -0.31
RAPGEF3-220ENST00000549347 DEFB131AP59861 70 aa13.1□□□□□ -0.31
RAPGEF3-220ENST00000549347 C10orf113Q5VZT2 155 aa13.1□□□□□ -0.31
RAPGEF3-220ENST00000549347 LINC00305Q7Z4B0 112 aa13.1□□□□□ -0.31
RAPGEF3-220ENST00000549347 APRG1Q8IVJ8 170 aa13.1□□□□□ -0.31
RAPGEF3-220ENST00000549347 TNFSF18Q9UNG2 199 aa13.1□□□□□ -0.31
RAPGEF3-220ENST00000549347 FXYD6-FXYD2A0A087WZ82 144 aa13.09□□□□□ -0.31
RAPGEF3-220ENST00000549347 LOC102724200A0A096LPH7 203 aaPredicted RBP13.09□□□□□ -0.31
RAPGEF3-220ENST00000549347 RNF222A6NCQ9 220 aa13.09□□□□□ -0.31
RAPGEF3-220ENST00000549347 IFNA5P01569 189 aa13.09□□□□□ -0.31
RAPGEF3-220ENST00000549347 MEOX2P50222 304 aa13.09□□□□□ -0.31
RAPGEF3-220ENST00000549347 ZNF124Q15973 351 aa13.09□□□□□ -0.31
RAPGEF3-220ENST00000549347 HAGHQ16775 308 aa13.09□□□□□ -0.31
RAPGEF3-220ENST00000549347 SAMD13Q5VXD3 122 aa13.09□□□□□ -0.31
RAPGEF3-220ENST00000549347 Q6ZNX1 250 aa13.09□□□□□ -0.31
RAPGEF3-220ENST00000549347 TM2D3Q9BRN9 247 aa13.09□□□□□ -0.31
RAPGEF3-220ENST00000549347 WFDC1Q9HC57 220 aa13.09□□□□□ -0.31
RAPGEF3-220ENST00000549347 DNAJC4Q9NNZ3 241 aa13.09□□□□□ -0.31
RAPGEF3-220ENST00000549347 C17orf112F2Z3M2 114 aa13.08□□□□□ -0.32
RAPGEF3-220ENST00000549347 PSMB3P49720 205 aa13.08□□□□□ -0.32
RAPGEF3-220ENST00000549347 SNRPD3P62318 126 aaKnown RBP13.08□□□□□ -0.32
RAPGEF3-220ENST00000549347 MORN5Q5VZ52 161 aa13.08□□□□□ -0.32
RAPGEF3-220ENST00000549347 ZNF709Q8N972 641 aa13.08□□□□□ -0.32
RAPGEF3-220ENST00000549347 GATAD1Q8WUU5 269 aa13.08□□□□□ -0.32
RAPGEF3-220ENST00000549347 C17orf77Q96MU5 243 aa13.08□□□□□ -0.32
RAPGEF3-220ENST00000549347 HUWE1Q7Z6Z7 4374 aaKnown RBP13.08□□□□□ -0.32
RAPGEF3-220ENST00000549347 A0A087X0K7 114 aa13.07□□□□□ -0.32
RAPGEF3-220ENST00000549347 MRPS12O15235 138 aaKnown RBP13.07□□□□□ -0.32
RAPGEF3-220ENST00000549347 ZNF266Q14584 549 aa13.07□□□□□ -0.32
RAPGEF3-220ENST00000549347 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.07□□□□□ -0.32
RAPGEF3-220ENST00000549347 INO80EQ8NBZ0 244 aaPredicted RBP13.07□□□□□ -0.32
RAPGEF3-220ENST00000549347 SCGB1C1Q8TD33 95 aa13.07□□□□□ -0.32
RAPGEF3-220ENST00000549347 RSG1Q9BU20 258 aa13.07□□□□□ -0.32
RAPGEF3-220ENST00000549347 ISLRO14498 428 aa13.06□□□□□ -0.32
RAPGEF3-220ENST00000549347 ATF4P18848 351 aaPredicted RBP13.06□□□□□ -0.32
RAPGEF3-220ENST00000549347 PSMG4Q5JS54 123 aa13.06□□□□□ -0.32
RAPGEF3-220ENST00000549347 KIR2DL5BA0A0G2JN68 375 aa13.05□□□□□ -0.32
RAPGEF3-220ENST00000549347 KIR2DL5BA0A0G2JPC4 375 aa13.05□□□□□ -0.32
RAPGEF3-220ENST00000549347 ID1P41134 155 aa13.05□□□□□ -0.32
RAPGEF3-220ENST00000549347 APOC4P55056 127 aa13.05□□□□□ -0.32
RAPGEF3-220ENST00000549347 GCSAMLQ5JQS6 135 aa13.05□□□□□ -0.32
RAPGEF3-220ENST00000549347 KIR2DL5AQ8N109 375 aa13.05□□□□□ -0.32
RAPGEF3-220ENST00000549347 KIR2DL5BQ8NHK3 375 aa13.05□□□□□ -0.32
RAPGEF3-220ENST00000549347 SPATA25Q9BR10 227 aa13.05□□□□□ -0.32
RAPGEF3-220ENST00000549347 SMLR1H3BR10 107 aa13.04□□□□□ -0.32
RAPGEF3-220ENST00000549347 BPIFA4PQ86YQ2 179 aa13.04□□□□□ -0.32
RAPGEF3-220ENST00000549347 ZMAT4Q9H898 229 aa13.04□□□□□ -0.32
RAPGEF3-220ENST00000549347 TIMM9Q9Y5J7 89 aa13.04□□□□□ -0.32
RAPGEF3-220ENST00000549347 COL7A1Q02388 2944 aa13.03□□□□□ -0.32
RAPGEF3-220ENST00000549347 CXCL2P19875 107 aa13.03□□□□□ -0.32
RAPGEF3-220ENST00000549347 TRPT1Q86TN4 253 aaKnown RBP13.03□□□□□ -0.32
RAPGEF3-220ENST00000549347 STHQ8IWL8 128 aa13.03□□□□□ -0.32
RAPGEF3-220ENST00000549347 C16orf92Q96LL3 132 aa13.03□□□□□ -0.32
RAPGEF3-220ENST00000549347 MRPL32Q9BYC8 188 aaKnown RBP13.03□□□□□ -0.32
RAPGEF3-220ENST00000549347 KNCNA6PVL3 124 aa13.02□□□□□ -0.33
RAPGEF3-220ENST00000549347 ARPC5O15511 151 aa13.02□□□□□ -0.33
RAPGEF3-220ENST00000549347 IGLC2P0DOY2 106 aa13.02□□□□□ -0.33
RAPGEF3-220ENST00000549347 RPL35AP18077 110 aaKnown RBP13.02□□□□□ -0.33
RAPGEF3-220ENST00000549347 FFAR4Q5NUL3 377 aa13.02□□□□□ -0.33
RAPGEF3-220ENST00000549347 FAM78BQ5VT40 261 aa13.02□□□□□ -0.33
RAPGEF3-220ENST00000549347 RCHY1Q96PM5 261 aa13.02□□□□□ -0.33
RAPGEF3-220ENST00000549347 U3KQK5 164 aa13.02□□□□□ -0.33
RAPGEF3-220ENST00000549347 TRAV8-2A0A0B4J237 113 aa13.01□□□□□ -0.33
RAPGEF3-220ENST00000549347 TRAV5A0A0B4J249 113 aa13.01□□□□□ -0.33
RAPGEF3-220ENST00000549347 UBE2CO00762 179 aa13.01□□□□□ -0.33
RAPGEF3-220ENST00000549347 ZNF345Q14585 488 aa13.01□□□□□ -0.33
RAPGEF3-220ENST00000549347 ACTL10Q5JWF8 245 aa13.01□□□□□ -0.33
RAPGEF3-220ENST00000549347 LCN15Q6UWW0 184 aa13.01□□□□□ -0.33
RAPGEF3-220ENST00000549347 C20orf173Q96LM9 149 aa13.01□□□□□ -0.33
RAPGEF3-220ENST00000549347 LINC00052Q96N35 136 aa13.01□□□□□ -0.33
RAPGEF3-220ENST00000549347 HRH4Q9H3N8 390 aa13.01□□□□□ -0.33
RAPGEF3-220ENST00000549347 TMEM14CQ9P0S9 112 aa13.01□□□□□ -0.33
RAPGEF3-220ENST00000549347 HMSDA8MTL9 139 aa13□□□□□ -0.33
RAPGEF3-220ENST00000549347 HLA-DRB4P13762 266 aa13□□□□□ -0.33
RAPGEF3-220ENST00000549347 FOXI2Q6ZQN5 318 aa13□□□□□ -0.33
RAPGEF3-220ENST00000549347 Q6ZWC4 215 aa13□□□□□ -0.33
RAPGEF3-220ENST00000549347 MIR17HGQ75NE6 70 aa13□□□□□ -0.33
RAPGEF3-220ENST00000549347 HSD17B11Q8NBQ5 300 aa13□□□□□ -0.33
RAPGEF3-220ENST00000549347 OR11H4Q8NGC9 324 aa13□□□□□ -0.33
RAPGEF3-220ENST00000549347 OR2G3Q8NGZ4 309 aa13□□□□□ -0.33
RAPGEF3-220ENST00000549347 ST6GAL2Q96JF0 529 aa13□□□□□ -0.33
RAPGEF3-220ENST00000549347 SLC50A1Q9BRV3 221 aa13□□□□□ -0.33
RAPGEF3-220ENST00000549347 PSMG3Q9BT73 122 aaPredicted RBP13□□□□□ -0.33
RAPGEF3-220ENST00000549347 SLC25A2Q9BXI2 301 aa13□□□□□ -0.33
RAPGEF3-220ENST00000549347 MFFQ9GZY8 342 aa13□□□□□ -0.33
RAPGEF3-220ENST00000549347 SAV1Q9H4B6 383 aaPredicted RBP13□□□□□ -0.33
RAPGEF3-220ENST00000549347 RFNGQ9Y644 331 aa13□□□□□ -0.33
RAPGEF3-220ENST00000549347 HLA-DRB4X5D2U9 266 aa13□□□□□ -0.33
RAPGEF3-220ENST00000549347 BORCS7-ASMTA0A0B4J1R7 106 aa12.99□□□□□ -0.33
RAPGEF3-220ENST00000549347 H3BMM0 161 aa12.99□□□□□ -0.33
RAPGEF3-220ENST00000549347 TAAR5O14804 337 aa12.99□□□□□ -0.33
RAPGEF3-220ENST00000549347 ATP6V0CP27449 155 aa12.99□□□□□ -0.33
RAPGEF3-220ENST00000549347 GUK1Q16774 197 aa12.99□□□□□ -0.33
RAPGEF3-220ENST00000549347 SPATA31B1PQ5VZV4 182 aa12.99□□□□□ -0.33
RAPGEF3-220ENST00000549347 RPL7L1Q6DKI1 246 aaKnown RBP12.99□□□□□ -0.33
RAPGEF3-220ENST00000549347 FAM167A-AS1Q96KT0 104 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms