RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 RFNGQ9Y644 331 aa9.18□□□□□ -0.94
PTCH1-218ENST00000548945 C5orf51A6NDU8 294 aa9.17□□□□□ -0.94
PTCH1-218ENST00000548945 FAM25EA8MYX2 175 aa9.17□□□□□ -0.94
PTCH1-218ENST00000548945 CCSO14618 274 aa9.17□□□□□ -0.94
PTCH1-218ENST00000548945 ADAP1O75689 374 aa9.17□□□□□ -0.94
PTCH1-218ENST00000548945 SIX6O95475 246 aa9.17□□□□□ -0.94
PTCH1-218ENST00000548945 FABP1P07148 127 aa9.17□□□□□ -0.94
PTCH1-218ENST00000548945 HOXB5P09067 269 aa9.17□□□□□ -0.94
PTCH1-218ENST00000548945 GPX4P36969 197 aaPredicted RBP9.17□□□□□ -0.94
PTCH1-218ENST00000548945 CYCSP99999 105 aaKnown RBP9.17□□□□□ -0.94
PTCH1-218ENST00000548945 RNF212Q495C1 297 aa9.17□□□□□ -0.94
PTCH1-218ENST00000548945 ZFP69Q49AA0 526 aa9.17□□□□□ -0.94
PTCH1-218ENST00000548945 GDF5OSQ5U4N7 250 aa9.17□□□□□ -0.94
PTCH1-218ENST00000548945 SAMD13Q5VXD3 122 aa9.17□□□□□ -0.94
PTCH1-218ENST00000548945 Q6ZR54 194 aa9.17□□□□□ -0.94
PTCH1-218ENST00000548945 ZNF709Q8N972 641 aa9.17□□□□□ -0.94
PTCH1-218ENST00000548945 DTD1Q8TEA8 209 aa9.17□□□□□ -0.94
PTCH1-218ENST00000548945 SCRT1Q9BWW7 348 aa9.17□□□□□ -0.94
PTCH1-218ENST00000548945 BOLA2-SMG1P6H3BVE0 249 aa9.16□□□□□ -0.94
PTCH1-218ENST00000548945 M0R2N4 97 aa9.16□□□□□ -0.94
PTCH1-218ENST00000548945 ISLRO14498 428 aa9.16□□□□□ -0.94
PTCH1-218ENST00000548945 SOCS3O14543 225 aa9.16□□□□□ -0.94
PTCH1-218ENST00000548945 PAX9P55771 341 aa9.16□□□□□ -0.94
PTCH1-218ENST00000548945 SMCO1Q147U7 214 aa9.16□□□□□ -0.94
PTCH1-218ENST00000548945 GGNBP1Q5YKI7 109 aa9.16□□□□□ -0.94
PTCH1-218ENST00000548945 OR2T35Q8NGX2 323 aa9.16□□□□□ -0.94
PTCH1-218ENST00000548945 NIPSNAP3BQ9BS92 247 aa9.16□□□□□ -0.94
PTCH1-218ENST00000548945 PBDC1Q9BVG4 233 aa9.16□□□□□ -0.94
PTCH1-218ENST00000548945 NMES1Q9C002 83 aa9.16□□□□□ -0.94
PTCH1-218ENST00000548945 DYNC1H1Q14204 4646 aaKnown RBP9.16□□□□□ -0.94
PTCH1-218ENST00000548945 ZFP92A6NM28 416 aa9.15□□□□□ -0.94
PTCH1-218ENST00000548945 C1QBP02746 253 aa9.15□□□□□ -0.94
PTCH1-218ENST00000548945 EMP1P54849 157 aa9.15□□□□□ -0.94
PTCH1-218ENST00000548945 PSG9Q00887 426 aa9.15□□□□□ -0.94
PTCH1-218ENST00000548945 GAMTQ14353 236 aa9.15□□□□□ -0.94
PTCH1-218ENST00000548945 SOHLH1Q5JUK2 328 aa9.15□□□□□ -0.94
PTCH1-218ENST00000548945 FAM222AQ5U5X8 452 aa9.15□□□□□ -0.94
PTCH1-218ENST00000548945 LYZL2Q7Z4W2 148 aa9.15□□□□□ -0.94
PTCH1-218ENST00000548945 UBE2DNLQ8IWF7 75 aa9.15□□□□□ -0.94
PTCH1-218ENST00000548945 SLC35E1Q96K37 410 aa9.15□□□□□ -0.94
PTCH1-218ENST00000548945 C2orf50Q96LR7 162 aa9.15□□□□□ -0.94
PTCH1-218ENST00000548945 LINC00052Q96N35 136 aa9.15□□□□□ -0.94
PTCH1-218ENST00000548945 RBKSQ9H477 322 aa9.15□□□□□ -0.94
PTCH1-218ENST00000548945 GOLT1BQ9Y3E0 138 aa9.15□□□□□ -0.94
PTCH1-218ENST00000548945 IGKV1D-37A0A075B6S9 117 aa9.14□□□□□ -0.95
PTCH1-218ENST00000548945 IGHV3OR16-12A0A075B7B8 117 aa9.14□□□□□ -0.95
PTCH1-218ENST00000548945 IGKV3-20P01619 116 aa9.14□□□□□ -0.95
PTCH1-218ENST00000548945 HBE1P02100 147 aa9.14□□□□□ -0.95
PTCH1-218ENST00000548945 MEOX2P50222 304 aa9.14□□□□□ -0.95
PTCH1-218ENST00000548945 ZNF90Q03938 601 aa9.14□□□□□ -0.95
PTCH1-218ENST00000548945 FGL1Q08830 312 aa9.14□□□□□ -0.95
PTCH1-218ENST00000548945 IAH1Q2TAA2 248 aaPredicted RBP9.14□□□□□ -0.95
PTCH1-218ENST00000548945 EBLN2Q6P2I7 272 aa9.14□□□□□ -0.95
PTCH1-218ENST00000548945 OR4B1Q8NGF8 309 aa9.14□□□□□ -0.95
PTCH1-218ENST00000548945 A0A0J9YX75 114 aa9.13□□□□□ -0.95
PTCH1-218ENST00000548945 A8MTW9 85 aa9.13□□□□□ -0.95
PTCH1-218ENST00000548945 CFDP00746 253 aaPredicted RBP9.13□□□□□ -0.95
PTCH1-218ENST00000548945 SLC25A6P12236 298 aa9.13□□□□□ -0.95
PTCH1-218ENST00000548945 FAM3BP58499 235 aaPredicted RBP9.13□□□□□ -0.95
PTCH1-218ENST00000548945 FXYD7P58549 80 aa9.13□□□□□ -0.95
PTCH1-218ENST00000548945 DEFB1P60022 68 aa9.13□□□□□ -0.95
PTCH1-218ENST00000548945 FAM78BQ5VT40 261 aa9.13□□□□□ -0.95
PTCH1-218ENST00000548945 OR8I2Q8N0Y5 310 aa9.13□□□□□ -0.95
PTCH1-218ENST00000548945 ZBTB8BQ8NAP8 495 aaPredicted RBP9.13□□□□□ -0.95
PTCH1-218ENST00000548945 PPP1R1CQ8WVI7 109 aa9.13□□□□□ -0.95
PTCH1-218ENST00000548945 HYLS1Q96M11 299 aa9.13□□□□□ -0.95
PTCH1-218ENST00000548945 TRGV9Q99603 122 aa9.13□□□□□ -0.95
PTCH1-218ENST00000548945 SLC35B3Q9H1N7 401 aa9.13□□□□□ -0.95
PTCH1-218ENST00000548945 RPRMQ9NS64 109 aa9.13□□□□□ -0.95
PTCH1-218ENST00000548945 SLC45A2Q9UMX9 530 aa9.13□□□□□ -0.95
PTCH1-218ENST00000548945 LOC102723971A0A1B0GUV8 181 aa9.12□□□□□ -0.95
PTCH1-218ENST00000548945 SMLR1H3BR10 107 aa9.12□□□□□ -0.95
PTCH1-218ENST00000548945 PET100P0DJ07 73 aa9.12□□□□□ -0.95
PTCH1-218ENST00000548945 LYZP61626 148 aa9.12□□□□□ -0.95
PTCH1-218ENST00000548945 RRN3P1Q2M238 152 aa9.12□□□□□ -0.95
PTCH1-218ENST00000548945 C1orf158Q8N1D5 194 aa9.12□□□□□ -0.95
PTCH1-218ENST00000548945 GSKIPQ9P0R6 139 aa9.12□□□□□ -0.95
PTCH1-218ENST00000548945 YTHDF2Q9Y5A9 579 aaKnown RBP9.12□□□□□ -0.95
PTCH1-218ENST00000548945 ABCA13Q86UQ4 5058 aa9.12□□□□□ -0.95
PTCH1-218ENST00000548945 IGLV2-18A0A075B6J9 118 aa9.11□□□□□ -0.95
PTCH1-218ENST00000548945 G3V3Q6 166 aa9.11□□□□□ -0.95
PTCH1-218ENST00000548945 GALR1P47211 349 aa9.11□□□□□ -0.95
PTCH1-218ENST00000548945 DAD1P61803 113 aa9.11□□□□□ -0.95
PTCH1-218ENST00000548945 RAB11AP62491 216 aa9.11□□□□□ -0.95
PTCH1-218ENST00000548945 IL15RAQ13261 267 aa9.11□□□□□ -0.95
PTCH1-218ENST00000548945 THAP8Q8NA92 274 aa9.11□□□□□ -0.95
PTCH1-218ENST00000548945 C15orf53Q8NAA6 179 aa9.11□□□□□ -0.95
PTCH1-218ENST00000548945 OR1S1Q8NH92 325 aa9.11□□□□□ -0.95
PTCH1-218ENST00000548945 IGF2BP2-AS1Q96M15 143 aa9.11□□□□□ -0.95
PTCH1-218ENST00000548945 MAGT1Q9H0U3 335 aa9.11□□□□□ -0.95
PTCH1-218ENST00000548945 DOK5Q9P104 306 aa9.11□□□□□ -0.95
PTCH1-218ENST00000548945 IGKV1OR2-108A0A075B7D4 117 aa9.1□□□□□ -0.95
PTCH1-218ENST00000548945 PITX3O75364 302 aa9.1□□□□□ -0.95
PTCH1-218ENST00000548945 MPC2O95563 127 aa9.1□□□□□ -0.95
PTCH1-218ENST00000548945 HTN3P15516 51 aa9.1□□□□□ -0.95
PTCH1-218ENST00000548945 S100A7P31151 101 aa9.1□□□□□ -0.95
PTCH1-218ENST00000548945 LRRC37A5PQ49AS3 106 aa9.1□□□□□ -0.95
PTCH1-218ENST00000548945 C1orf134Q5TEV5 83 aa9.1□□□□□ -0.95
PTCH1-218ENST00000548945 TMEM88Q6PEY1 159 aa9.1□□□□□ -0.95
PTCH1-218ENST00000548945 OR4D5Q8NGN0 318 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms