RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 FKBP11Q9NYL4 201 aa11.92□□□□□ -0.5
SSH1-208ENST00000548522 RABAC1Q9UI14 185 aa11.92□□□□□ -0.5
SSH1-208ENST00000548522 X6R8D5 127 aa11.92□□□□□ -0.5
SSH1-208ENST00000548522 A0A0G2JRQ6 117 aa11.91□□□□□ -0.5
SSH1-208ENST00000548522 KNCNA6PVL3 124 aa11.91□□□□□ -0.5
SSH1-208ENST00000548522 C11orf94C9JXX5 98 aa11.91□□□□□ -0.5
SSH1-208ENST00000548522 SPP1P10451 314 aa11.91□□□□□ -0.5
SSH1-208ENST00000548522 FAM74A1Q5RGS3 127 aa11.91□□□□□ -0.5
SSH1-208ENST00000548522 STX12Q86Y82 276 aa11.91□□□□□ -0.5
SSH1-208ENST00000548522 STHQ8IWL8 128 aa11.91□□□□□ -0.5
SSH1-208ENST00000548522 LYPD6BQ8NI32 183 aa11.91□□□□□ -0.5
SSH1-208ENST00000548522 TMED6Q8WW62 240 aa11.91□□□□□ -0.5
SSH1-208ENST00000548522 PARD6GQ9BYG4 376 aaPredicted RBP11.91□□□□□ -0.5
SSH1-208ENST00000548522 CLEC5AQ9NY25 188 aa11.91□□□□□ -0.5
SSH1-208ENST00000548522 MRPL36Q9P0J6 103 aaKnown RBP11.91□□□□□ -0.5
SSH1-208ENST00000548522 HSPB7Q9UBY9 170 aa11.91□□□□□ -0.5
SSH1-208ENST00000548522 CACNG5Q9UF02 275 aa11.91□□□□□ -0.5
SSH1-208ENST00000548522 CELA1Q9UNI1 258 aa11.91□□□□□ -0.5
SSH1-208ENST00000548522 STRAPQ9Y3F4 350 aaKnown RBP11.91□□□□□ -0.5
SSH1-208ENST00000548522 SYNGR2O43760 224 aa11.9□□□□□ -0.5
SSH1-208ENST00000548522 SSSCA1O60232 199 aa11.9□□□□□ -0.5
SSH1-208ENST00000548522 PAX9P55771 341 aa11.9□□□□□ -0.5
SSH1-208ENST00000548522 OR4A16Q8NH70 328 aa11.9□□□□□ -0.5
SSH1-208ENST00000548522 GNPNAT1Q96EK6 184 aaPredicted RBP11.9□□□□□ -0.5
SSH1-208ENST00000548522 CIB3Q96Q77 187 aaPredicted RBP11.9□□□□□ -0.5
SSH1-208ENST00000548522 HSPG2P98160 4391 aa11.9□□□□□ -0.5
SSH1-208ENST00000548522 TRAV2A0A0B4J234 112 aa11.89□□□□□ -0.51
SSH1-208ENST00000548522 IGSF23A1L1A6 192 aa11.89□□□□□ -0.51
SSH1-208ENST00000548522 ZNF705EA8MWA4 302 aaPredicted RBP11.89□□□□□ -0.51
SSH1-208ENST00000548522 UMAD1C9J7I0 102 aa11.89□□□□□ -0.51
SSH1-208ENST00000548522 ZNF688P0C7X2 276 aa11.89□□□□□ -0.51
SSH1-208ENST00000548522 SULT1A1P50225 295 aa11.89□□□□□ -0.51
SSH1-208ENST00000548522 CAV2P51636 162 aa11.89□□□□□ -0.51
SSH1-208ENST00000548522 ZNF600Q6ZNG1 722 aa11.89□□□□□ -0.51
SSH1-208ENST00000548522 H2BFWTQ7Z2G1 175 aa11.89□□□□□ -0.51
SSH1-208ENST00000548522 STXBP6Q8NFX7 210 aa11.89□□□□□ -0.51
SSH1-208ENST00000548522 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.89□□□□□ -0.51
SSH1-208ENST00000548522 AGRNO00468 2067 aa11.88□□□□□ -0.51
SSH1-208ENST00000548522 TRAV10A0A0B4J240 114 aa11.88□□□□□ -0.51
SSH1-208ENST00000548522 FAM24AA6NFZ4 105 aa11.88□□□□□ -0.51
SSH1-208ENST00000548522 K7EQG2 157 aa11.88□□□□□ -0.51
SSH1-208ENST00000548522 HSPE1P61604 102 aaKnown RBP11.88□□□□□ -0.51
SSH1-208ENST00000548522 DPPA3Q6W0C5 159 aa11.88□□□□□ -0.51
SSH1-208ENST00000548522 Q6ZRM9 215 aa11.88□□□□□ -0.51
SSH1-208ENST00000548522 LINC00336Q6ZUF6 198 aa11.88□□□□□ -0.51
SSH1-208ENST00000548522 OR52E5Q8NH55 327 aa11.88□□□□□ -0.51
SSH1-208ENST00000548522 PCNPQ8WW12 178 aaKnown RBP11.88□□□□□ -0.51
SSH1-208ENST00000548522 ATP5SQ99766 215 aa11.88□□□□□ -0.51
SSH1-208ENST00000548522 WFDC1Q9HC57 220 aa11.88□□□□□ -0.51
SSH1-208ENST00000548522 RTL8CO15255 209 aa11.87□□□□□ -0.51
SSH1-208ENST00000548522 TMEM50AO95807 157 aa11.87□□□□□ -0.51
SSH1-208ENST00000548522 CD5P06127 495 aa11.87□□□□□ -0.51
SSH1-208ENST00000548522 MIFP14174 115 aa11.87□□□□□ -0.51
SSH1-208ENST00000548522 NPBWR1P48145 328 aa11.87□□□□□ -0.51
SSH1-208ENST00000548522 HBG1P69891 147 aa11.87□□□□□ -0.51
SSH1-208ENST00000548522 HBG2P69892 147 aa11.87□□□□□ -0.51
SSH1-208ENST00000548522 NHLH2Q02577 135 aa11.87□□□□□ -0.51
SSH1-208ENST00000548522 ACTL10Q5JWF8 245 aa11.87□□□□□ -0.51
SSH1-208ENST00000548522 CSNK1G2-AS1Q8NCQ2 148 aa11.87□□□□□ -0.51
SSH1-208ENST00000548522 OR1S2Q8NGQ3 325 aa11.87□□□□□ -0.51
SSH1-208ENST00000548522 M0R2N4 97 aa11.86□□□□□ -0.51
SSH1-208ENST00000548522 AMBPP02760 352 aa11.86□□□□□ -0.51
SSH1-208ENST00000548522 ERHP84090 104 aaKnown RBP11.86□□□□□ -0.51
SSH1-208ENST00000548522 ATP6V1FQ16864 119 aa11.86□□□□□ -0.51
SSH1-208ENST00000548522 C12orf74Q32Q52 190 aa11.86□□□□□ -0.51
SSH1-208ENST00000548522 TMEM14EPQ6UXP3 125 aa11.86□□□□□ -0.51
SSH1-208ENST00000548522 DCANP1Q8TF63 244 aa11.86□□□□□ -0.51
SSH1-208ENST00000548522 FNDC4Q9H6D8 234 aaPredicted RBP11.86□□□□□ -0.51
SSH1-208ENST00000548522 M6PRP20645 277 aa11.85□□□□□ -0.51
SSH1-208ENST00000548522 MLANAQ16655 118 aa11.85□□□□□ -0.51
SSH1-208ENST00000548522 PXDC1Q5TGL8 231 aa11.85□□□□□ -0.51
SSH1-208ENST00000548522 PVRIGQ6DKI7 326 aa11.85□□□□□ -0.51
SSH1-208ENST00000548522 OR5C1Q8NGR4 320 aa11.85□□□□□ -0.51
SSH1-208ENST00000548522 SMIM3Q9BZL3 60 aa11.85□□□□□ -0.51
SSH1-208ENST00000548522 MAGT1Q9H0U3 335 aa11.85□□□□□ -0.51
SSH1-208ENST00000548522 PSENENQ9NZ42 101 aa11.85□□□□□ -0.51
SSH1-208ENST00000548522 DEFB131BA0A096LNP1 70 aa11.84□□□□□ -0.51
SSH1-208ENST00000548522 PRSS29PA6NIE9 313 aa11.84□□□□□ -0.51
SSH1-208ENST00000548522 MED14OSP0DP75 135 aa11.84□□□□□ -0.51
SSH1-208ENST00000548522 RNASE2P10153 161 aaKnown RBP11.84□□□□□ -0.51
SSH1-208ENST00000548522 NPPCP23582 126 aa11.84□□□□□ -0.51
SSH1-208ENST00000548522 CRYBB3P26998 211 aa11.84□□□□□ -0.51
SSH1-208ENST00000548522 MORN3Q6PF18 240 aaPredicted RBP11.84□□□□□ -0.51
SSH1-208ENST00000548522 GRAMD2BQ96HH9 432 aa11.84□□□□□ -0.51
SSH1-208ENST00000548522 METTL26Q96S19 204 aa11.84□□□□□ -0.51
SSH1-208ENST00000548522 PSMG3Q9BT73 122 aaPredicted RBP11.84□□□□□ -0.51
SSH1-208ENST00000548522 SMDT1Q9H4I9 107 aa11.84□□□□□ -0.51
SSH1-208ENST00000548522 TMEM231Q9H6L2 316 aa11.84□□□□□ -0.51
SSH1-208ENST00000548522 IFNA5P01569 189 aa11.83□□□□□ -0.52
SSH1-208ENST00000548522 SNCAP37840 140 aa11.83□□□□□ -0.52
SSH1-208ENST00000548522 TIGITQ495A1 244 aa11.83□□□□□ -0.52
SSH1-208ENST00000548522 TMEM41BQ5BJD5 291 aa11.83□□□□□ -0.52
SSH1-208ENST00000548522 CLN5O75503 358 aa11.82□□□□□ -0.52
SSH1-208ENST00000548522 IGKV1-17P01599 117 aa11.82□□□□□ -0.52
SSH1-208ENST00000548522 ATP6V0CP27449 155 aa11.82□□□□□ -0.52
SSH1-208ENST00000548522 OPRK1P41145 380 aa11.82□□□□□ -0.52
SSH1-208ENST00000548522 SPCS3P61009 180 aa11.82□□□□□ -0.52
SSH1-208ENST00000548522 RPP30P78346 268 aaKnown RBP11.82□□□□□ -0.52
SSH1-208ENST00000548522 PSMG4Q5JS54 123 aa11.82□□□□□ -0.52
SSH1-208ENST00000548522 C10orf91Q5T1B1 145 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms