RNA–Protein interactions for RNA: ENST00000548171.1

GATC-202, Transcript of glutamyl-tRNA amidotransferase subunit C, humanhuman

TSL 2

Gene GATC, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATC-202ENST00000548171 MIXL1Q9H2W2 232 aa13.99□□□□□ -0.17
GATC-202ENST00000548171 SCP2D1Q9UJQ7 156 aa13.99□□□□□ -0.17
GATC-202ENST00000548171 BOLA2-SMG1P6H3BVE0 249 aa13.98□□□□□ -0.17
GATC-202ENST00000548171 RGS5O15539 181 aa13.98□□□□□ -0.17
GATC-202ENST00000548171 TTC32Q5I0X7 151 aa13.98□□□□□ -0.17
GATC-202ENST00000548171 BAP18Q8IXM2 172 aa13.98□□□□□ -0.17
GATC-202ENST00000548171 BPIFCQ8NFQ6 507 aa13.98□□□□□ -0.17
GATC-202ENST00000548171 RNF141Q8WVD5 230 aa13.98□□□□□ -0.17
GATC-202ENST00000548171 Q9H8V8 135 aa13.98□□□□□ -0.17
GATC-202ENST00000548171 RABL2AQ9UBK7 228 aaPredicted RBP13.98□□□□□ -0.17
GATC-202ENST00000548171 RABL2BQ9UNT1 228 aa13.98□□□□□ -0.17
GATC-202ENST00000548171 CTDSPLO15194 276 aa13.97□□□□□ -0.17
GATC-202ENST00000548171 AZU1P20160 251 aa13.97□□□□□ -0.17
GATC-202ENST00000548171 TAS2R60P59551 318 aa13.97□□□□□ -0.17
GATC-202ENST00000548171 FCN2Q15485 313 aa13.97□□□□□ -0.17
GATC-202ENST00000548171 C16orf74Q96GX8 76 aa13.97□□□□□ -0.17
GATC-202ENST00000548171 LINC01587Q99440 93 aa13.97□□□□□ -0.17
GATC-202ENST00000548171 TMEM147Q9BVK8 224 aa13.97□□□□□ -0.17
GATC-202ENST00000548171 TRAV8-2A0A0B4J237 113 aa13.96□□□□□ -0.17
GATC-202ENST00000548171 DUXBA0A1W2PPF3 345 aa13.96□□□□□ -0.17
GATC-202ENST00000548171 PITX3O75364 302 aa13.96□□□□□ -0.17
GATC-202ENST00000548171 ORM2P19652 201 aa13.96□□□□□ -0.17
GATC-202ENST00000548171 RPP30P78346 268 aaKnown RBP13.96□□□□□ -0.17
GATC-202ENST00000548171 ZNF493Q6ZR52 646 aa13.96□□□□□ -0.17
GATC-202ENST00000548171 PAIP2BQ9ULR5 123 aaKnown RBP13.96□□□□□ -0.17
GATC-202ENST00000548171 TIMM8BQ9Y5J9 83 aaPredicted RBP13.96□□□□□ -0.17
GATC-202ENST00000548171 LRP1BQ9NZR2 4599 aa13.95□□□□□ -0.18
GATC-202ENST00000548171 TRAV12-2A0A075B6T6 113 aa13.95□□□□□ -0.18
GATC-202ENST00000548171 MED6O75586 246 aa13.95□□□□□ -0.18
GATC-202ENST00000548171 BTF3P20290 206 aaKnown RBP13.95□□□□□ -0.18
GATC-202ENST00000548171 RNF182Q8N6D2 247 aa13.95□□□□□ -0.18
GATC-202ENST00000548171 ZNF738Q8NE65 137 aa13.95□□□□□ -0.18
GATC-202ENST00000548171 ZNF503Q96F45 646 aa13.95□□□□□ -0.18
GATC-202ENST00000548171 CIB3Q96Q77 187 aaPredicted RBP13.95□□□□□ -0.18
GATC-202ENST00000548171 SLC25A39Q9BZJ4 359 aaPredicted RBP13.95□□□□□ -0.18
GATC-202ENST00000548171 NAA50Q9GZZ1 169 aaKnown RBP13.95□□□□□ -0.18
GATC-202ENST00000548171 A0A1W2PPQ1 181 aa13.94□□□□□ -0.18
GATC-202ENST00000548171 ANKRD20A5PA0PJZ0 165 aa13.94□□□□□ -0.18
GATC-202ENST00000548171 IGFL4Q6B9Z1 124 aa13.94□□□□□ -0.18
GATC-202ENST00000548171 TMEM144Q7Z5S9 345 aa13.94□□□□□ -0.18
GATC-202ENST00000548171 Q9H3A6 140 aa13.94□□□□□ -0.18
GATC-202ENST00000548171 PPP1R14DQ9NXH3 145 aa13.94□□□□□ -0.18
GATC-202ENST00000548171 PRSS46E5RG02 174 aa13.93□□□□□ -0.18
GATC-202ENST00000548171 IAPPP10997 89 aa13.93□□□□□ -0.18
GATC-202ENST00000548171 SLC25A6P12236 298 aa13.93□□□□□ -0.18
GATC-202ENST00000548171 RPL7P18124 248 aaKnown RBP13.93□□□□□ -0.18
GATC-202ENST00000548171 FGL1Q08830 312 aa13.93□□□□□ -0.18
GATC-202ENST00000548171 IL18Q14116 193 aa13.93□□□□□ -0.18
GATC-202ENST00000548171 OR10J6PQ8NGY7 276 aa13.93□□□□□ -0.18
GATC-202ENST00000548171 CTDSP2O14595 271 aa13.92□□□□□ -0.18
GATC-202ENST00000548171 HTN1P15515 57 aa13.92□□□□□ -0.18
GATC-202ENST00000548171 GATA2P23769 480 aaPredicted RBP13.92□□□□□ -0.18
GATC-202ENST00000548171 RHOBP62745 196 aa13.92□□□□□ -0.18
GATC-202ENST00000548171 HIST1H1AQ02539 215 aaPredicted RBP13.92□□□□□ -0.18
GATC-202ENST00000548171 OR8A1Q8NGG7 326 aa13.92□□□□□ -0.18
GATC-202ENST00000548171 TMEM263Q8WUH6 116 aaKnown RBP13.92□□□□□ -0.18
GATC-202ENST00000548171 GNPNAT1Q96EK6 184 aaPredicted RBP13.92□□□□□ -0.18
GATC-202ENST00000548171 UPK3BQ9BT76 320 aa13.92□□□□□ -0.18
GATC-202ENST00000548171 KRTAP1-5Q9BYS1 174 aa13.92□□□□□ -0.18
GATC-202ENST00000548171 MCUBQ9NWR8 336 aa13.92□□□□□ -0.18
GATC-202ENST00000548171 ADAP1O75689 374 aa13.91□□□□□ -0.18
GATC-202ENST00000548171 KRTAP10-2P60368 255 aa13.91□□□□□ -0.18
GATC-202ENST00000548171 AKR1C1Q04828 323 aa13.91□□□□□ -0.18
GATC-202ENST00000548171 TMEM182Q6ZP80 229 aaPredicted RBP13.91□□□□□ -0.18
GATC-202ENST00000548171 RNASE8Q8TDE3 154 aaKnown RBP13.91□□□□□ -0.18
GATC-202ENST00000548171 DIRAS2Q96HU8 199 aa13.91□□□□□ -0.18
GATC-202ENST00000548171 SHANK2-AS3Q9BTD1 123 aa13.91□□□□□ -0.18
GATC-202ENST00000548171 TRAV26-1A0A087WT03 109 aa13.9□□□□□ -0.18
GATC-202ENST00000548171 H3BRN7 92 aa13.9□□□□□ -0.18
GATC-202ENST00000548171 SYNGR2O43760 224 aa13.9□□□□□ -0.18
GATC-202ENST00000548171 CXCL3P19876 107 aa13.9□□□□□ -0.18
GATC-202ENST00000548171 M6PRP20645 277 aa13.9□□□□□ -0.18
GATC-202ENST00000548171 RAP2BP61225 183 aa13.9□□□□□ -0.18
GATC-202ENST00000548171 OR5I1Q13606 314 aa13.9□□□□□ -0.18
GATC-202ENST00000548171 RXFP4Q8TDU9 374 aa13.9□□□□□ -0.18
GATC-202ENST00000548171 NOP10Q9NPE3 64 aaKnown RBP13.9□□□□□ -0.18
GATC-202ENST00000548171 A0A087X0K7 114 aa13.89□□□□□ -0.19
GATC-202ENST00000548171 H3BNG1 76 aa13.89□□□□□ -0.19
GATC-202ENST00000548171 H7BYZ3 331 aa13.89□□□□□ -0.19
GATC-202ENST00000548171 CDKN1BP46527 198 aa13.89□□□□□ -0.19
GATC-202ENST00000548171 PSG3Q16557 428 aa13.89□□□□□ -0.19
GATC-202ENST00000548171 TMEM128Q5BJH2 165 aa13.89□□□□□ -0.19
GATC-202ENST00000548171 LINC00612Q8N6U2 182 aa13.89□□□□□ -0.19
GATC-202ENST00000548171 LRTM2Q8N967 370 aa13.89□□□□□ -0.19
GATC-202ENST00000548171 C20orf144Q9BQM9 153 aa13.89□□□□□ -0.19
GATC-202ENST00000548171 HIGD1AQ9Y241 93 aa13.89□□□□□ -0.19
GATC-202ENST00000548171 DMBT1Q9UGM3 2413 aaPredicted RBP13.89□□□□□ -0.19
GATC-202ENST00000548171 EPM2AB3EWF7 344 aa13.88□□□□□ -0.19
GATC-202ENST00000548171 HYPMO75409 117 aa13.88□□□□□ -0.19
GATC-202ENST00000548171 S100A7AQ86SG5 101 aa13.88□□□□□ -0.19
GATC-202ENST00000548171 RSL24D1Q9UHA3 163 aaKnown RBP13.88□□□□□ -0.19
GATC-202ENST00000548171 WRBO00258 174 aa13.87□□□□□ -0.19
GATC-202ENST00000548171 IL5P05113 134 aa13.87□□□□□ -0.19
GATC-202ENST00000548171 SPANXN5Q5MJ07 72 aa13.87□□□□□ -0.19
GATC-202ENST00000548171 ACOT7LQ6ZUV0 252 aa13.87□□□□□ -0.19
GATC-202ENST00000548171 LRRC20Q8TCA0 184 aa13.87□□□□□ -0.19
GATC-202ENST00000548171 UHRF2Q96PU4 802 aa13.87□□□□□ -0.19
GATC-202ENST00000548171 RNF24Q9Y225 148 aa13.87□□□□□ -0.19
GATC-202ENST00000548171 MRPS16Q9Y3D3 137 aaKnown RBP13.87□□□□□ -0.19
GATC-202ENST00000548171 APOBP04114 4563 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms