RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 PPP5D1E7EU14 171 aa13.29□□□□□ -0.28
HDAC7-227ENST00000548080 LINC01619G3V211 115 aa13.29□□□□□ -0.28
HDAC7-227ENST00000548080 CD5P06127 495 aa13.29□□□□□ -0.28
HDAC7-227ENST00000548080 GCHFRP30047 84 aa13.29□□□□□ -0.28
HDAC7-227ENST00000548080 PSMB3P49720 205 aa13.29□□□□□ -0.28
HDAC7-227ENST00000548080 PPT1P50897 306 aa13.29□□□□□ -0.28
HDAC7-227ENST00000548080 MORN5Q5VZ52 161 aa13.29□□□□□ -0.28
HDAC7-227ENST00000548080 PQLC2Q6ZP29 291 aa13.29□□□□□ -0.28
HDAC7-227ENST00000548080 S100A7AQ86SG5 101 aa13.29□□□□□ -0.28
HDAC7-227ENST00000548080 ZNF414Q96IQ9 312 aa13.29□□□□□ -0.28
HDAC7-227ENST00000548080 FAM167A-AS1Q96KT0 104 aa13.29□□□□□ -0.28
HDAC7-227ENST00000548080 SLC25A2Q9BXI2 301 aa13.29□□□□□ -0.28
HDAC7-227ENST00000548080 TMEM231Q9H6L2 316 aa13.29□□□□□ -0.28
HDAC7-227ENST00000548080 TREM1Q9NP99 234 aa13.29□□□□□ -0.28
HDAC7-227ENST00000548080 IGHV3-35A0A0C4DH35 117 aa13.29□□□□□ -0.28
HDAC7-227ENST00000548080 S100A1P23297 94 aa13.29□□□□□ -0.28
HDAC7-227ENST00000548080 USF2Q15853 346 aaPredicted RBP13.29□□□□□ -0.28
HDAC7-227ENST00000548080 ZNF506Q5JVG8 444 aa13.29□□□□□ -0.28
HDAC7-227ENST00000548080 TOMM20LQ6UXN7 152 aa13.29□□□□□ -0.28
HDAC7-227ENST00000548080 WFDC9Q8NEX5 89 aa13.29□□□□□ -0.28
HDAC7-227ENST00000548080 RARRES2Q99969 163 aa13.29□□□□□ -0.28
HDAC7-227ENST00000548080 SLC25A39Q9BZJ4 359 aaPredicted RBP13.29□□□□□ -0.28
HDAC7-227ENST00000548080 LOC102723971A0A1B0GUV8 181 aa13.28□□□□□ -0.28
HDAC7-227ENST00000548080 OR7C2O60412 319 aa13.28□□□□□ -0.28
HDAC7-227ENST00000548080 BCL2P10415 239 aa13.28□□□□□ -0.28
HDAC7-227ENST00000548080 DLX4Q92988 240 aaPredicted RBP13.28□□□□□ -0.28
HDAC7-227ENST00000548080 ZNF503Q96F45 646 aa13.28□□□□□ -0.28
HDAC7-227ENST00000548080 SHANK2-AS3Q9BTD1 123 aa13.28□□□□□ -0.28
HDAC7-227ENST00000548080 MANBALQ9NQG1 85 aa13.28□□□□□ -0.28
HDAC7-227ENST00000548080 PEF1Q9UBV8 284 aaKnown RBP13.28□□□□□ -0.28
HDAC7-227ENST00000548080 H3BRN7 92 aa13.27□□□□□ -0.29
HDAC7-227ENST00000548080 BMPR1BO00238 502 aa13.27□□□□□ -0.29
HDAC7-227ENST00000548080 HSPB1P04792 205 aaKnown RBP13.27□□□□□ -0.29
HDAC7-227ENST00000548080 TAGLN2P37802 199 aaKnown RBP13.27□□□□□ -0.29
HDAC7-227ENST00000548080 STXBP6Q8NFX7 210 aa13.27□□□□□ -0.29
HDAC7-227ENST00000548080 SMDT1Q9H4I9 107 aa13.27□□□□□ -0.29
HDAC7-227ENST00000548080 ZFAND3Q9H8U3 227 aa13.27□□□□□ -0.29
HDAC7-227ENST00000548080 TMEM167BQ9NRX6 74 aa13.27□□□□□ -0.29
HDAC7-227ENST00000548080 RABAC1Q9UI14 185 aa13.27□□□□□ -0.29
HDAC7-227ENST00000548080 GGCTO75223 188 aaKnown RBP13.26□□□□□ -0.29
HDAC7-227ENST00000548080 PRB2P02812 416 aaPredicted RBP13.26□□□□□ -0.29
HDAC7-227ENST00000548080 S100A7P31151 101 aa13.26□□□□□ -0.29
HDAC7-227ENST00000548080 HOXD3P31249 432 aaPredicted RBP13.26□□□□□ -0.29
HDAC7-227ENST00000548080 ICAM4Q14773 271 aa13.26□□□□□ -0.29
HDAC7-227ENST00000548080 SAMD5Q5TGI4 173 aa13.26□□□□□ -0.29
HDAC7-227ENST00000548080 RXFP4Q8TDU9 374 aa13.26□□□□□ -0.29
HDAC7-227ENST00000548080 PAXXQ9BUH6 204 aa13.26□□□□□ -0.29
HDAC7-227ENST00000548080 OR51M1Q9H341 326 aa13.26□□□□□ -0.29
HDAC7-227ENST00000548080 VAX2Q9UIW0 290 aa13.26□□□□□ -0.29
HDAC7-227ENST00000548080 MEGF8Q7Z7M0 2845 aa13.25□□□□□ -0.29
HDAC7-227ENST00000548080 NDUFA4O00483 81 aa13.25□□□□□ -0.29
HDAC7-227ENST00000548080 SUN5Q8TC36 379 aa13.25□□□□□ -0.29
HDAC7-227ENST00000548080 NARS2Q96I59 477 aaKnown RBP13.25□□□□□ -0.29
HDAC7-227ENST00000548080 TMEM218A2RU14 115 aa13.24□□□□□ -0.29
HDAC7-227ENST00000548080 C9JQL5 133 aa13.24□□□□□ -0.29
HDAC7-227ENST00000548080 PAGE4O60829 102 aa13.24□□□□□ -0.29
HDAC7-227ENST00000548080 LEMD1Q68G75 181 aa13.24□□□□□ -0.29
HDAC7-227ENST00000548080 RNF24Q9Y225 148 aa13.24□□□□□ -0.29
HDAC7-227ENST00000548080 ZNF98A6NK75 572 aa13.23□□□□□ -0.29
HDAC7-227ENST00000548080 KRBOX1C9JBD0 128 aa13.23□□□□□ -0.29
HDAC7-227ENST00000548080 OVOL1O14753 267 aa13.23□□□□□ -0.29
HDAC7-227ENST00000548080 OR10J4P0C629 311 aa13.23□□□□□ -0.29
HDAC7-227ENST00000548080 PYYP10082 97 aa13.23□□□□□ -0.29
HDAC7-227ENST00000548080 UBE2L3P68036 154 aaKnown RBP13.23□□□□□ -0.29
HDAC7-227ENST00000548080 BEAN1Q3B7T3 259 aa13.23□□□□□ -0.29
HDAC7-227ENST00000548080 TMEM14CQ9P0S9 112 aa13.23□□□□□ -0.29
HDAC7-227ENST00000548080 IGHV3OR16-8A0A075B7F1 116 aa13.23□□□□□ -0.29
HDAC7-227ENST00000548080 SYNJ2BPP57105 145 aa13.23□□□□□ -0.29
HDAC7-227ENST00000548080 UBE2G2P60604 165 aa13.23□□□□□ -0.29
HDAC7-227ENST00000548080 METTL26Q96S19 204 aa13.23□□□□□ -0.29
HDAC7-227ENST00000548080 ARL2-SNX15V9GYD0 113 aa13.23□□□□□ -0.29
HDAC7-227ENST00000548080 SRP19P09132 144 aaKnown RBP13.22□□□□□ -0.29
HDAC7-227ENST00000548080 SFTA3P0C7M3 94 aa13.22□□□□□ -0.29
HDAC7-227ENST00000548080 GP9P14770 177 aa13.22□□□□□ -0.29
HDAC7-227ENST00000548080 MEF2BQ02080 365 aaPredicted RBP13.22□□□□□ -0.29
HDAC7-227ENST00000548080 RPEL1Q2QD12 228 aa13.22□□□□□ -0.29
HDAC7-227ENST00000548080 CST9LP1Q5W188 147 aa13.22□□□□□ -0.29
HDAC7-227ENST00000548080 BPIFA4PQ86YQ2 179 aa13.22□□□□□ -0.29
HDAC7-227ENST00000548080 FXYD5Q96DB9 178 aa13.22□□□□□ -0.29
HDAC7-227ENST00000548080 LINC00052Q96N35 136 aa13.22□□□□□ -0.29
HDAC7-227ENST00000548080 TXNDC17Q9BRA2 123 aa13.22□□□□□ -0.29
HDAC7-227ENST00000548080 C20orf24Q9BUV8 137 aa13.22□□□□□ -0.29
HDAC7-227ENST00000548080 SLC35B3Q9H1N7 401 aa13.22□□□□□ -0.29
HDAC7-227ENST00000548080 DNAH3Q8TD57 4116 aa13.21□□□□□ -0.29
HDAC7-227ENST00000548080 C11orf94C9JXX5 98 aa13.21□□□□□ -0.3
HDAC7-227ENST00000548080 NDUFS6O75380 124 aaKnown RBP13.21□□□□□ -0.3
HDAC7-227ENST00000548080 ZP3P21754 424 aa13.21□□□□□ -0.3
HDAC7-227ENST00000548080 NPPCP23582 126 aa13.21□□□□□ -0.3
HDAC7-227ENST00000548080 DEFA6Q01524 100 aa13.21□□□□□ -0.3
HDAC7-227ENST00000548080 FAM106AQ4KMX7 169 aa13.21□□□□□ -0.3
HDAC7-227ENST00000548080 GPHB5Q86YW7 130 aa13.21□□□□□ -0.3
HDAC7-227ENST00000548080 YTHDF2Q9Y5A9 579 aaKnown RBP13.21□□□□□ -0.3
HDAC7-227ENST00000548080 FAM74A7A6NL05 159 aa13.2□□□□□ -0.3
HDAC7-227ENST00000548080 NBEAP1P0C6P0 100 aa13.2□□□□□ -0.3
HDAC7-227ENST00000548080 CRYBB3P26998 211 aa13.2□□□□□ -0.3
HDAC7-227ENST00000548080 CD81P60033 236 aa13.2□□□□□ -0.3
HDAC7-227ENST00000548080 KRTAP10-11P60412 298 aa13.2□□□□□ -0.3
HDAC7-227ENST00000548080 UNQ9165/PRO28630Q6UXU0 137 aa13.2□□□□□ -0.3
HDAC7-227ENST00000548080 TMEM190Q8WZ59 177 aa13.2□□□□□ -0.3
HDAC7-227ENST00000548080 U3KQE9 123 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms