RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 FLVCR2Q9UPI3 526 aa4.82□□□□□ -1.64
SCAF11-211ENST00000547950 ALMS1Q8TCU4 4167 aa4.82□□□□□ -1.64
SCAF11-211ENST00000547950 NAP1L6A6NFF2 107 aa4.81□□□□□ -1.64
SCAF11-211ENST00000547950 PRSS46E5RG02 174 aa4.81□□□□□ -1.64
SCAF11-211ENST00000547950 ISLRO14498 428 aa4.81□□□□□ -1.64
SCAF11-211ENST00000547950 SOCS3O14543 225 aa4.81□□□□□ -1.64
SCAF11-211ENST00000547950 NDUFB6O95139 128 aa4.81□□□□□ -1.64
SCAF11-211ENST00000547950 CFDP00746 253 aaPredicted RBP4.81□□□□□ -1.64
SCAF11-211ENST00000547950 IL5P05113 134 aa4.81□□□□□ -1.64
SCAF11-211ENST00000547950 OR4E1P0C645 316 aa4.81□□□□□ -1.64
SCAF11-211ENST00000547950 GALR1P47211 349 aa4.81□□□□□ -1.64
SCAF11-211ENST00000547950 FAM78BQ5VT40 261 aa4.81□□□□□ -1.64
SCAF11-211ENST00000547950 FOXI2Q6ZQN5 318 aa4.81□□□□□ -1.64
SCAF11-211ENST00000547950 ACOT7LQ6ZUV0 252 aa4.81□□□□□ -1.64
SCAF11-211ENST00000547950 BPIFCQ8NFQ6 507 aa4.81□□□□□ -1.64
SCAF11-211ENST00000547950 C20orf173Q96LM9 149 aa4.81□□□□□ -1.64
SCAF11-211ENST00000547950 C7orf50Q9BRJ6 194 aaKnown RBP4.81□□□□□ -1.64
SCAF11-211ENST00000547950 SCRT1Q9BWW7 348 aa4.81□□□□□ -1.64
SCAF11-211ENST00000547950 SLC25A32Q9H2D1 315 aa4.81□□□□□ -1.64
SCAF11-211ENST00000547950 RPRMQ9NS64 109 aa4.81□□□□□ -1.64
SCAF11-211ENST00000547950 GSKIPQ9P0R6 139 aa4.81□□□□□ -1.64
SCAF11-211ENST00000547950 A0A0J9YX75 114 aa4.8□□□□□ -1.64
SCAF11-211ENST00000547950 TMEM189A5PLL7 270 aa4.8□□□□□ -1.64
SCAF11-211ENST00000547950 SMIM9A6NGZ8 99 aa4.8□□□□□ -1.64
SCAF11-211ENST00000547950 CENPXA8MT69 81 aa4.8□□□□□ -1.64
SCAF11-211ENST00000547950 ZNF705FA8MVS1 300 aaPredicted RBP4.8□□□□□ -1.64
SCAF11-211ENST00000547950 SSSCA1O60232 199 aa4.8□□□□□ -1.64
SCAF11-211ENST00000547950 HYPMO75409 117 aa4.8□□□□□ -1.64
SCAF11-211ENST00000547950 SCGB1D2O95969 90 aa4.8□□□□□ -1.64
SCAF11-211ENST00000547950 OR5G3P0C626 314 aa4.8□□□□□ -1.64
SCAF11-211ENST00000547950 ZNF705DP0CH99 300 aaPredicted RBP4.8□□□□□ -1.64
SCAF11-211ENST00000547950 ZNF705BP0CI00 300 aaPredicted RBP4.8□□□□□ -1.64
SCAF11-211ENST00000547950 HTN3P15516 51 aa4.8□□□□□ -1.64
SCAF11-211ENST00000547950 ANXA7P20073 488 aaKnown RBP4.8□□□□□ -1.64
SCAF11-211ENST00000547950 HOXA5P20719 270 aa4.8□□□□□ -1.64
SCAF11-211ENST00000547950 S100A7P31151 101 aa4.8□□□□□ -1.64
SCAF11-211ENST00000547950 MEOX2P50222 304 aa4.8□□□□□ -1.64
SCAF11-211ENST00000547950 UBE2MP61081 183 aaKnown RBP4.8□□□□□ -1.64
SCAF11-211ENST00000547950 RRAS2P62070 204 aaPredicted RBP4.8□□□□□ -1.64
SCAF11-211ENST00000547950 C4orf46Q504U0 113 aa4.8□□□□□ -1.64
SCAF11-211ENST00000547950 SAMD13Q5VXD3 122 aa4.8□□□□□ -1.64
SCAF11-211ENST00000547950 SPATA31B1PQ5VZV4 182 aa4.8□□□□□ -1.64
SCAF11-211ENST00000547950 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.8□□□□□ -1.64
SCAF11-211ENST00000547950 ZNF705AQ6ZN79 300 aaPredicted RBP4.8□□□□□ -1.64
SCAF11-211ENST00000547950 CYP2G1PQ6ZSU1 146 aa4.8□□□□□ -1.64
SCAF11-211ENST00000547950 TMEM144Q7Z5S9 345 aa4.8□□□□□ -1.64
SCAF11-211ENST00000547950 C1orf158Q8N1D5 194 aa4.8□□□□□ -1.64
SCAF11-211ENST00000547950 ZNF709Q8N972 641 aa4.8□□□□□ -1.64
SCAF11-211ENST00000547950 OR4D5Q8NGN0 318 aa4.8□□□□□ -1.64
SCAF11-211ENST00000547950 RNF141Q8WVD5 230 aa4.8□□□□□ -1.64
SCAF11-211ENST00000547950 SMIM8Q96KF7 97 aa4.8□□□□□ -1.64
SCAF11-211ENST00000547950 CLUHP3Q96NS8 147 aa4.8□□□□□ -1.64
SCAF11-211ENST00000547950 NEU1Q99519 415 aa4.8□□□□□ -1.64
SCAF11-211ENST00000547950 TMEM208Q9BTX3 173 aa4.8□□□□□ -1.64
SCAF11-211ENST00000547950 NDUFAF3Q9BU61 184 aa4.8□□□□□ -1.64
SCAF11-211ENST00000547950 RNF126Q9BV68 326 aa4.8□□□□□ -1.64
SCAF11-211ENST00000547950 RBM38Q9H0Z9 239 aaKnown RBP4.8□□□□□ -1.64
SCAF11-211ENST00000547950 GOLT1BQ9Y3E0 138 aa4.8□□□□□ -1.64
SCAF11-211ENST00000547950 RFNGQ9Y644 331 aa4.8□□□□□ -1.64
SCAF11-211ENST00000547950 BIRC6Q9NR09 4857 aa4.79□□□□□ -1.64
SCAF11-211ENST00000547950 TRAV8-2A0A0B4J237 113 aa4.79□□□□□ -1.64
SCAF11-211ENST00000547950 PMS2P5A8MQ11 134 aa4.79□□□□□ -1.64
SCAF11-211ENST00000547950 ZNF701M0R085 212 aaPredicted RBP4.79□□□□□ -1.64
SCAF11-211ENST00000547950 M0R2N4 97 aa4.79□□□□□ -1.64
SCAF11-211ENST00000547950 CCNKO75909 580 aa4.79□□□□□ -1.64
SCAF11-211ENST00000547950 HBE1P02100 147 aa4.79□□□□□ -1.64
SCAF11-211ENST00000547950 PRM2P04554 102 aa4.79□□□□□ -1.64
SCAF11-211ENST00000547950 METTL15P1P0C7V9 234 aa4.79□□□□□ -1.64
SCAF11-211ENST00000547950 PRB4P10163 310 aaPredicted RBP4.79□□□□□ -1.64
SCAF11-211ENST00000547950 CNN1P51911 297 aaKnown RBP4.79□□□□□ -1.64
SCAF11-211ENST00000547950 PAX9P55771 341 aa4.79□□□□□ -1.64
SCAF11-211ENST00000547950 RAP2BP61225 183 aa4.79□□□□□ -1.64
SCAF11-211ENST00000547950 RRN3P1Q2M238 152 aa4.79□□□□□ -1.64
SCAF11-211ENST00000547950 IAH1Q2TAA2 248 aaPredicted RBP4.79□□□□□ -1.64
SCAF11-211ENST00000547950 FAM222AQ5U5X8 452 aa4.79□□□□□ -1.64
SCAF11-211ENST00000547950 RNF182Q8N6D2 247 aa4.79□□□□□ -1.64
SCAF11-211ENST00000547950 OR10P1Q8NGE3 313 aa4.79□□□□□ -1.64
SCAF11-211ENST00000547950 LRRC20Q8TCA0 184 aa4.79□□□□□ -1.64
SCAF11-211ENST00000547950 C17orf77Q96MU5 243 aa4.79□□□□□ -1.64
SCAF11-211ENST00000547950 NIPSNAP3BQ9BS92 247 aa4.79□□□□□ -1.64
SCAF11-211ENST00000547950 KRTAP4-5Q9BYR2 181 aa4.79□□□□□ -1.64
SCAF11-211ENST00000547950 SLC25A39Q9BZJ4 359 aaPredicted RBP4.79□□□□□ -1.64
SCAF11-211ENST00000547950 SLC45A2Q9UMX9 530 aa4.79□□□□□ -1.64
SCAF11-211ENST00000547950 HIGD1AQ9Y241 93 aa4.79□□□□□ -1.64
SCAF11-211ENST00000547950 LOC102723971A0A1B0GUV8 181 aa4.78□□□□□ -1.64
SCAF11-211ENST00000547950 ZNF705GA8MUZ8 300 aaPredicted RBP4.78□□□□□ -1.64
SCAF11-211ENST00000547950 M0R2Z0 102 aa4.78□□□□□ -1.64
SCAF11-211ENST00000547950 DUSP14O95147 198 aaKnown RBP4.78□□□□□ -1.64
SCAF11-211ENST00000547950 AMBPP02760 352 aa4.78□□□□□ -1.64
SCAF11-211ENST00000547950 SNRPCP09234 159 aaKnown RBP4.78□□□□□ -1.64
SCAF11-211ENST00000547950 LINC00869P0C866 280 aa4.78□□□□□ -1.64
SCAF11-211ENST00000547950 P0DMU3 169 aa4.78□□□□□ -1.64
SCAF11-211ENST00000547950 FAM231AP0DMU4 169 aa4.78□□□□□ -1.64
SCAF11-211ENST00000547950 FAM231CP0DMU5 169 aa4.78□□□□□ -1.64
SCAF11-211ENST00000547950 SELENOTP62341 195 aa4.78□□□□□ -1.64
SCAF11-211ENST00000547950 RHOBP62745 196 aa4.78□□□□□ -1.64
SCAF11-211ENST00000547950 SPINK13Q1W4C9 94 aa4.78□□□□□ -1.64
SCAF11-211ENST00000547950 POM121L12Q8N7R1 296 aa4.78□□□□□ -1.64
SCAF11-211ENST00000547950 ZBTB8BQ8NAP8 495 aaPredicted RBP4.78□□□□□ -1.64
SCAF11-211ENST00000547950 ZNF738Q8NE65 137 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms