RNA–Protein interactions for RNA: ENST00000547637.1

SMARCD1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-204ENST00000547637 FGL1Q08830 312 aa16.34■□□□□ 0.21
SMARCD1-204ENST00000547637 SPANXN5Q5MJ07 72 aa16.34■□□□□ 0.21
SMARCD1-204ENST00000547637 C20orf173Q96LM9 149 aa16.34■□□□□ 0.21
SMARCD1-204ENST00000547637 CNN1P51911 297 aaKnown RBP16.33■□□□□ 0.2
SMARCD1-204ENST00000547637 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.33■□□□□ 0.2
SMARCD1-204ENST00000547637 STRAPQ9Y3F4 350 aaKnown RBP16.33■□□□□ 0.2
SMARCD1-204ENST00000547637 RPL7P18124 248 aaKnown RBP16.32■□□□□ 0.2
SMARCD1-204ENST00000547637 SPINK13Q1W4C9 94 aa16.32■□□□□ 0.2
SMARCD1-204ENST00000547637 AMTNQ6UX39 209 aa16.32■□□□□ 0.2
SMARCD1-204ENST00000547637 OR11H7Q8NGC8 314 aa16.32■□□□□ 0.2
SMARCD1-204ENST00000547637 DEDD2Q8WXF8 326 aa16.32■□□□□ 0.2
SMARCD1-204ENST00000547637 RNF24Q9Y225 148 aa16.32■□□□□ 0.2
SMARCD1-204ENST00000547637 ZNF705GA8MUZ8 300 aaPredicted RBP16.31■□□□□ 0.2
SMARCD1-204ENST00000547637 IL5P05113 134 aa16.31■□□□□ 0.2
SMARCD1-204ENST00000547637 TSPOP30536 169 aa16.31■□□□□ 0.2
SMARCD1-204ENST00000547637 PYDC2Q56P42 97 aa16.31■□□□□ 0.2
SMARCD1-204ENST00000547637 TMEM144Q7Z5S9 345 aa16.31■□□□□ 0.2
SMARCD1-204ENST00000547637 ZNF738Q8NE65 137 aa16.31■□□□□ 0.2
SMARCD1-204ENST00000547637 MCFD2Q8NI22 146 aa16.31■□□□□ 0.2
SMARCD1-204ENST00000547637 LRRC20Q8TCA0 184 aa16.31■□□□□ 0.2
SMARCD1-204ENST00000547637 SOSTQ9BQB4 213 aa16.31■□□□□ 0.2
SMARCD1-204ENST00000547637 SMCO3A2RU48 225 aa16.3■□□□□ 0.2
SMARCD1-204ENST00000547637 M0R2Z0 102 aa16.3■□□□□ 0.2
SMARCD1-204ENST00000547637 SFT2D2O95562 160 aa16.3■□□□□ 0.2
SMARCD1-204ENST00000547637 DEFB130BP0DP73 79 aa16.3■□□□□ 0.2
SMARCD1-204ENST00000547637 DEFB130AP0DP74 79 aa16.3■□□□□ 0.2
SMARCD1-204ENST00000547637 GATA2P23769 480 aaPredicted RBP16.3■□□□□ 0.2
SMARCD1-204ENST00000547637 TMEM256Q8N2U0 113 aa16.3■□□□□ 0.2
SMARCD1-204ENST00000547637 NACAE9PAV3 2078 aa16.3■□□□□ 0.2
SMARCD1-204ENST00000547637 FAT2Q9NYQ8 4349 aa16.29■□□□□ 0.2
SMARCD1-204ENST00000547637 F5H768 121 aa16.29■□□□□ 0.2
SMARCD1-204ENST00000547637 HOXB5P09067 269 aa16.29■□□□□ 0.2
SMARCD1-204ENST00000547637 CCL18P55774 89 aa16.29■□□□□ 0.2
SMARCD1-204ENST00000547637 RHOBP62745 196 aa16.29■□□□□ 0.2
SMARCD1-204ENST00000547637 LINC01587Q99440 93 aa16.29■□□□□ 0.2
SMARCD1-204ENST00000547637 SLC25A39Q9BZJ4 359 aaPredicted RBP16.29■□□□□ 0.2
SMARCD1-204ENST00000547637 SLIRPQ9GZT3 109 aaKnown RBP16.29■□□□□ 0.2
SMARCD1-204ENST00000547637 HIGD1AQ9Y241 93 aa16.29■□□□□ 0.2
SMARCD1-204ENST00000547637 PRSS46E5RG02 174 aa16.28■□□□□ 0.2
SMARCD1-204ENST00000547637 HYPMO75409 117 aa16.28■□□□□ 0.2
SMARCD1-204ENST00000547637 NUDT3O95989 172 aa16.28■□□□□ 0.2
SMARCD1-204ENST00000547637 ATP5G1P05496 136 aa16.28■□□□□ 0.2
SMARCD1-204ENST00000547637 ATP5G3P48201 142 aa16.28■□□□□ 0.2
SMARCD1-204ENST00000547637 SELENOTP62341 195 aa16.28■□□□□ 0.2
SMARCD1-204ENST00000547637 DNAH2Q9P225 4427 aa16.28■□□□□ 0.2
SMARCD1-204ENST00000547637 BOLA2-SMG1P6H3BVE0 249 aa16.27■□□□□ 0.2
SMARCD1-204ENST00000547637 CRXO43186 299 aaPredicted RBP16.27■□□□□ 0.2
SMARCD1-204ENST00000547637 CYP2G1PQ6ZSU1 146 aa16.27■□□□□ 0.2
SMARCD1-204ENST00000547637 ACOT7LQ6ZUV0 252 aa16.27■□□□□ 0.2
SMARCD1-204ENST00000547637 RNF182Q8N6D2 247 aa16.27■□□□□ 0.2
SMARCD1-204ENST00000547637 PCLOQ9Y6V0 5065 aa16.27■□□□□ 0.19
SMARCD1-204ENST00000547637 H3BP45 60 aa16.26■□□□□ 0.19
SMARCD1-204ENST00000547637 H3BRN7 92 aa16.26■□□□□ 0.19
SMARCD1-204ENST00000547637 OR5G3P0C626 314 aa16.26■□□□□ 0.19
SMARCD1-204ENST00000547637 S100A5P33763 92 aa16.26■□□□□ 0.19
SMARCD1-204ENST00000547637 PPP1R1AQ13522 171 aa16.26■□□□□ 0.19
SMARCD1-204ENST00000547637 IGFL4Q6B9Z1 124 aa16.26■□□□□ 0.19
SMARCD1-204ENST00000547637 ZNF575Q86XF7 245 aa16.26■□□□□ 0.19
SMARCD1-204ENST00000547637 SHANK2-AS3Q9BTD1 123 aa16.26■□□□□ 0.19
SMARCD1-204ENST00000547637 DNAH17Q9UFH2 4485 aa16.26■□□□□ 0.19
SMARCD1-204ENST00000547637 CBY3A6NI87 242 aa16.25■□□□□ 0.19
SMARCD1-204ENST00000547637 TAS2R60P59551 318 aa16.25■□□□□ 0.19
SMARCD1-204ENST00000547637 UBE2MP61081 183 aaKnown RBP16.25■□□□□ 0.19
SMARCD1-204ENST00000547637 HIST1H1AQ02539 215 aaPredicted RBP16.25■□□□□ 0.19
SMARCD1-204ENST00000547637 TMEM182Q6ZP80 229 aaPredicted RBP16.25■□□□□ 0.19
SMARCD1-204ENST00000547637 BAP18Q8IXM2 172 aa16.25■□□□□ 0.19
SMARCD1-204ENST00000547637 C16orf74Q96GX8 76 aa16.25■□□□□ 0.19
SMARCD1-204ENST00000547637 C17orf77Q96MU5 243 aa16.25■□□□□ 0.19
SMARCD1-204ENST00000547637 PSENENQ9NZ42 101 aa16.25■□□□□ 0.19
SMARCD1-204ENST00000547637 PKHD1P08F94 4074 aa16.24■□□□□ 0.19
SMARCD1-204ENST00000547637 TRAV12-2A0A075B6T6 113 aa16.24■□□□□ 0.19
SMARCD1-204ENST00000547637 TRAV8-2A0A0B4J237 113 aa16.24■□□□□ 0.19
SMARCD1-204ENST00000547637 NBDYA0A0U1RRE5 68 aa16.24■□□□□ 0.19
SMARCD1-204ENST00000547637 HTN1P15515 57 aa16.24■□□□□ 0.19
SMARCD1-204ENST00000547637 CLINT1Q14677 625 aa16.24■□□□□ 0.19
SMARCD1-204ENST00000547637 OR8A1Q8NGG7 326 aa16.24■□□□□ 0.19
SMARCD1-204ENST00000547637 TIMM8BQ9Y5J9 83 aaPredicted RBP16.24■□□□□ 0.19
SMARCD1-204ENST00000547637 H3BMQ9 156 aa16.23■□□□□ 0.19
SMARCD1-204ENST00000547637 PRM2P04554 102 aa16.23■□□□□ 0.19
SMARCD1-204ENST00000547637 LINC00869P0C866 280 aa16.23■□□□□ 0.19
SMARCD1-204ENST00000547637 ANXA7P20073 488 aaKnown RBP16.23■□□□□ 0.19
SMARCD1-204ENST00000547637 PLP1P60201 277 aa16.23■□□□□ 0.19
SMARCD1-204ENST00000547637 ID3Q02535 119 aa16.23■□□□□ 0.19
SMARCD1-204ENST00000547637 PSG3Q16557 428 aa16.23■□□□□ 0.19
SMARCD1-204ENST00000547637 ZNF493Q6ZR52 646 aa16.23■□□□□ 0.19
SMARCD1-204ENST00000547637 C6orf223Q8N319 242 aa16.23■□□□□ 0.19
SMARCD1-204ENST00000547637 TRIM63Q969Q1 353 aa16.23■□□□□ 0.19
SMARCD1-204ENST00000547637 C16orf90A8MZG2 172 aa16.22■□□□□ 0.19
SMARCD1-204ENST00000547637 NPVFQ9HCQ7 196 aa16.22■□□□□ 0.19
SMARCD1-204ENST00000547637 A0A087X0K7 114 aa16.21■□□□□ 0.19
SMARCD1-204ENST00000547637 ADAP1O75689 374 aa16.21■□□□□ 0.19
SMARCD1-204ENST00000547637 CXCL3P19876 107 aa16.21■□□□□ 0.19
SMARCD1-204ENST00000547637 AZU1P20160 251 aa16.21■□□□□ 0.19
SMARCD1-204ENST00000547637 CDKN1BP46527 198 aa16.21■□□□□ 0.19
SMARCD1-204ENST00000547637 INPP1P49441 399 aa16.21■□□□□ 0.19
SMARCD1-204ENST00000547637 OR10J6PQ8NGY7 276 aa16.21■□□□□ 0.19
SMARCD1-204ENST00000547637 ZNRF2Q8NHG8 242 aa16.21■□□□□ 0.19
SMARCD1-204ENST00000547637 MGAT4CQ9UBM8 478 aa16.21■□□□□ 0.19
SMARCD1-204ENST00000547637 POLR2GP62487 172 aaKnown RBP eCLIP16.2■□□□□ 0.18
SMARCD1-204ENST00000547637 FCN2Q15485 313 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms