RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 SMIM8Q96KF7 97 aa9.51□□□□□ -0.89
CPSF6-204ENST00000547486 TMEM147Q9BVK8 224 aa9.51□□□□□ -0.89
CPSF6-204ENST00000547486 DNAH6Q9C0G6 4158 aa9.51□□□□□ -0.89
CPSF6-204ENST00000547486 SMCO3A2RU48 225 aa9.5□□□□□ -0.89
CPSF6-204ENST00000547486 SSSCA1O60232 199 aa9.5□□□□□ -0.89
CPSF6-204ENST00000547486 IL5P05113 134 aa9.5□□□□□ -0.89
CPSF6-204ENST00000547486 SAMD13Q5VXD3 122 aa9.5□□□□□ -0.89
CPSF6-204ENST00000547486 TRIQKQ629K1 86 aa9.5□□□□□ -0.89
CPSF6-204ENST00000547486 POM121L12Q8N7R1 296 aa9.5□□□□□ -0.89
CPSF6-204ENST00000547486 NDUFAF3Q9BU61 184 aa9.5□□□□□ -0.89
CPSF6-204ENST00000547486 SLC25A39Q9BZJ4 359 aaPredicted RBP9.5□□□□□ -0.89
CPSF6-204ENST00000547486 GOLT1BQ9Y3E0 138 aa9.5□□□□□ -0.89
CPSF6-204ENST00000547486 H3BRN7 92 aa9.49□□□□□ -0.89
CPSF6-204ENST00000547486 IFNA21P01568 189 aa9.49□□□□□ -0.89
CPSF6-204ENST00000547486 INPP1P49441 399 aa9.49□□□□□ -0.89
CPSF6-204ENST00000547486 CNN1P51911 297 aaKnown RBP9.49□□□□□ -0.89
CPSF6-204ENST00000547486 RRAS2P62070 204 aaPredicted RBP9.49□□□□□ -0.89
CPSF6-204ENST00000547486 FGL1Q08830 312 aa9.49□□□□□ -0.89
CPSF6-204ENST00000547486 TMEM14EPQ6UXP3 125 aa9.49□□□□□ -0.89
CPSF6-204ENST00000547486 PATE2Q6UY27 113 aa9.49□□□□□ -0.89
CPSF6-204ENST00000547486 UHRF2Q96PU4 802 aa9.49□□□□□ -0.89
CPSF6-204ENST00000547486 C7orf50Q9BRJ6 194 aaKnown RBP9.49□□□□□ -0.89
CPSF6-204ENST00000547486 NIPSNAP3BQ9BS92 247 aa9.49□□□□□ -0.89
CPSF6-204ENST00000547486 SHANK2-AS3Q9BTD1 123 aa9.49□□□□□ -0.89
CPSF6-204ENST00000547486 KRTAP17-1Q9BYP8 105 aa9.49□□□□□ -0.89
CPSF6-204ENST00000547486 KIAA1109Q2LD37 5005 aa9.48□□□□□ -0.89
CPSF6-204ENST00000547486 LOC102723971A0A1B0GUV8 181 aa9.48□□□□□ -0.89
CPSF6-204ENST00000547486 CRXO43186 299 aaPredicted RBP9.48□□□□□ -0.89
CPSF6-204ENST00000547486 HYPMO75409 117 aa9.48□□□□□ -0.89
CPSF6-204ENST00000547486 HBE1P02100 147 aa9.48□□□□□ -0.89
CPSF6-204ENST00000547486 METTL15P1P0C7V9 234 aa9.48□□□□□ -0.89
CPSF6-204ENST00000547486 P0DMU3 169 aa9.48□□□□□ -0.89
CPSF6-204ENST00000547486 FAM231AP0DMU4 169 aa9.48□□□□□ -0.89
CPSF6-204ENST00000547486 FAM231CP0DMU5 169 aa9.48□□□□□ -0.89
CPSF6-204ENST00000547486 PRB4P10163 310 aaPredicted RBP9.48□□□□□ -0.89
CPSF6-204ENST00000547486 PLP1P60201 277 aa9.48□□□□□ -0.89
CPSF6-204ENST00000547486 ARL16Q0P5N6 197 aa9.48□□□□□ -0.89
CPSF6-204ENST00000547486 IAH1Q2TAA2 248 aaPredicted RBP9.48□□□□□ -0.89
CPSF6-204ENST00000547486 C4orf46Q504U0 113 aa9.48□□□□□ -0.89
CPSF6-204ENST00000547486 OR11H7Q8NGC8 314 aa9.48□□□□□ -0.89
CPSF6-204ENST00000547486 IGF2BP2-AS1Q96M15 143 aa9.48□□□□□ -0.89
CPSF6-204ENST00000547486 GPR82Q96P67 336 aa9.48□□□□□ -0.89
CPSF6-204ENST00000547486 HIGD1AQ9Y241 93 aa9.48□□□□□ -0.89
CPSF6-204ENST00000547486 YTHDF2Q9Y5A9 579 aaKnown RBP9.48□□□□□ -0.89
CPSF6-204ENST00000547486 HECTD4Q9Y4D8 3996 aa9.48□□□□□ -0.89
CPSF6-204ENST00000547486 M0R2Z0 102 aa9.47□□□□□ -0.89
CPSF6-204ENST00000547486 SCGB1D2O95969 90 aa9.47□□□□□ -0.89
CPSF6-204ENST00000547486 LINC00869P0C866 280 aa9.47□□□□□ -0.89
CPSF6-204ENST00000547486 IL7P13232 177 aa9.47□□□□□ -0.89
CPSF6-204ENST00000547486 DLK1P80370 383 aa9.47□□□□□ -0.89
CPSF6-204ENST00000547486 SPINK13Q1W4C9 94 aa9.47□□□□□ -0.89
CPSF6-204ENST00000547486 RRN3P1Q2M238 152 aa9.47□□□□□ -0.89
CPSF6-204ENST00000547486 ZBTB8BQ8NAP8 495 aaPredicted RBP9.47□□□□□ -0.89
CPSF6-204ENST00000547486 MITD1Q8WV92 249 aa9.47□□□□□ -0.89
CPSF6-204ENST00000547486 NPVFQ9HCQ7 196 aa9.47□□□□□ -0.89
CPSF6-204ENST00000547486 GSKIPQ9P0R6 139 aa9.47□□□□□ -0.89
CPSF6-204ENST00000547486 ZNF705GA8MUZ8 300 aaPredicted RBP9.46□□□□□ -0.9
CPSF6-204ENST00000547486 M0R2N4 97 aa9.46□□□□□ -0.9
CPSF6-204ENST00000547486 PLA2G10O15496 165 aa9.46□□□□□ -0.9
CPSF6-204ENST00000547486 DUSP14O95147 198 aaKnown RBP9.46□□□□□ -0.9
CPSF6-204ENST00000547486 MBPP02686 304 aaPredicted RBP9.46□□□□□ -0.9
CPSF6-204ENST00000547486 OR5G3P0C626 314 aa9.46□□□□□ -0.9
CPSF6-204ENST00000547486 HTN3P15516 51 aa9.46□□□□□ -0.9
CPSF6-204ENST00000547486 RAP2BP61225 183 aa9.46□□□□□ -0.9
CPSF6-204ENST00000547486 SELENOTP62341 195 aa9.46□□□□□ -0.9
CPSF6-204ENST00000547486 SLC38A11Q08AI6 406 aa9.46□□□□□ -0.9
CPSF6-204ENST00000547486 OXA1LQ15070 435 aa9.46□□□□□ -0.9
CPSF6-204ENST00000547486 OR10P1Q8NGE3 313 aa9.46□□□□□ -0.9
CPSF6-204ENST00000547486 ARL6Q9H0F7 186 aa9.46□□□□□ -0.9
CPSF6-204ENST00000547486 RCL1Q9Y2P8 373 aaKnown RBP9.46□□□□□ -0.9
CPSF6-204ENST00000547486 TRAV12-2A0A075B6T6 113 aa9.45□□□□□ -0.9
CPSF6-204ENST00000547486 C7orf66A4D0T2 115 aa9.45□□□□□ -0.9
CPSF6-204ENST00000547486 CENPXA8MT69 81 aa9.45□□□□□ -0.9
CPSF6-204ENST00000547486 FNDC10F2Z333 226 aa9.45□□□□□ -0.9
CPSF6-204ENST00000547486 K7EPK0 472 aa9.45□□□□□ -0.9
CPSF6-204ENST00000547486 MRPS12O15235 138 aaKnown RBP9.45□□□□□ -0.9
CPSF6-204ENST00000547486 RPL7P18124 248 aaKnown RBP9.45□□□□□ -0.9
CPSF6-204ENST00000547486 CXCL3P19876 107 aa9.45□□□□□ -0.9
CPSF6-204ENST00000547486 AZU1P20160 251 aa9.45□□□□□ -0.9
CPSF6-204ENST00000547486 S100A7P31151 101 aa9.45□□□□□ -0.9
CPSF6-204ENST00000547486 TAS2R30P59541 319 aa9.45□□□□□ -0.9
CPSF6-204ENST00000547486 TEPPQ6URK8 271 aa9.45□□□□□ -0.9
CPSF6-204ENST00000547486 BAP18Q8IXM2 172 aa9.45□□□□□ -0.9
CPSF6-204ENST00000547486 ZNF738Q8NE65 137 aa9.45□□□□□ -0.9
CPSF6-204ENST00000547486 FAM210BQ96KR6 192 aa9.45□□□□□ -0.9
CPSF6-204ENST00000547486 TMEM208Q9BTX3 173 aa9.45□□□□□ -0.9
CPSF6-204ENST00000547486 DNAH2Q9P225 4427 aa9.45□□□□□ -0.9
CPSF6-204ENST00000547486 FAT2Q9NYQ8 4349 aa9.44□□□□□ -0.9
CPSF6-204ENST00000547486 A0A087X0K7 114 aa9.44□□□□□ -0.9
CPSF6-204ENST00000547486 TEX48A0A1B0GUV7 120 aa9.44□□□□□ -0.9
CPSF6-204ENST00000547486 A0A1B0GVY2 172 aa9.44□□□□□ -0.9
CPSF6-204ENST00000547486 CCSO14618 274 aa9.44□□□□□ -0.9
CPSF6-204ENST00000547486 RTL8CO15255 209 aa9.44□□□□□ -0.9
CPSF6-204ENST00000547486 TSC22D2O75157 780 aa9.44□□□□□ -0.9
CPSF6-204ENST00000547486 SNRPCP09234 159 aaKnown RBP9.44□□□□□ -0.9
CPSF6-204ENST00000547486 ARV1Q9H2C2 271 aa9.44□□□□□ -0.9
CPSF6-204ENST00000547486 PLAC8L1A1L4L8 177 aa9.43□□□□□ -0.9
CPSF6-204ENST00000547486 AGPAT2O15120 278 aa9.43□□□□□ -0.9
CPSF6-204ENST00000547486 INSP01308 110 aa9.43□□□□□ -0.9
CPSF6-204ENST00000547486 DAD1P61803 113 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms