RNA–Protein interactions for RNA: ENST00000547338.5

RBFOX1-207, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-207ENST00000547338 TRAV30A0A087WSZ9 112 aa13.51□□□□□ -0.25
RBFOX1-207ENST00000547338 UBE2L3P68036 154 aaKnown RBP13.51□□□□□ -0.25
RBFOX1-207ENST00000547338 COX19Q49B96 90 aa13.51□□□□□ -0.25
RBFOX1-207ENST00000547338 TMEM219Q86XT9 240 aa13.51□□□□□ -0.25
RBFOX1-207ENST00000547338 FRZBQ92765 325 aa13.51□□□□□ -0.25
RBFOX1-207ENST00000547338 SMIM12Q96EX1 92 aa13.51□□□□□ -0.25
RBFOX1-207ENST00000547338 OSTCQ9NRP0 149 aa13.51□□□□□ -0.25
RBFOX1-207ENST00000547338 ZNF355PQ9NSJ1 428 aa13.51□□□□□ -0.25
RBFOX1-207ENST00000547338 S100A2P29034 98 aa13.5□□□□□ -0.25
RBFOX1-207ENST00000547338 MFAP2P55001 183 aa13.5□□□□□ -0.25
RBFOX1-207ENST00000547338 SUMO1P63165 101 aaKnown RBP13.5□□□□□ -0.25
RBFOX1-207ENST00000547338 ZNF90Q03938 601 aa13.5□□□□□ -0.25
RBFOX1-207ENST00000547338 C5orf64Q2M2E5 130 aa13.5□□□□□ -0.25
RBFOX1-207ENST00000547338 COA6Q5JTJ3 125 aaKnown RBP13.5□□□□□ -0.25
RBFOX1-207ENST00000547338 ZNF562Q6V9R5 426 aa13.5□□□□□ -0.25
RBFOX1-207ENST00000547338 GAR1Q9NY12 217 aaKnown RBP13.5□□□□□ -0.25
RBFOX1-207ENST00000547338 IL36BQ9NZH7 164 aa13.5□□□□□ -0.25
RBFOX1-207ENST00000547338 A0A1W2PPQ1 181 aa13.49□□□□□ -0.25
RBFOX1-207ENST00000547338 NPIPB5A8MRT5 1133 aa13.49□□□□□ -0.25
RBFOX1-207ENST00000547338 I3L2K1 104 aa13.49□□□□□ -0.25
RBFOX1-207ENST00000547338 REG1AP05451 166 aa13.49□□□□□ -0.25
RBFOX1-207ENST00000547338 CRYBB3P26998 211 aa13.49□□□□□ -0.25
RBFOX1-207ENST00000547338 LINC00305Q7Z4B0 112 aa13.49□□□□□ -0.25
RBFOX1-207ENST00000547338 WNT10AQ9GZT5 417 aa13.49□□□□□ -0.25
RBFOX1-207ENST00000547338 ZNF702PQ9H963 129 aa13.49□□□□□ -0.25
RBFOX1-207ENST00000547338 ISLRO14498 428 aa13.49□□□□□ -0.25
RBFOX1-207ENST00000547338 GCGP01275 180 aa13.49□□□□□ -0.25
RBFOX1-207ENST00000547338 CNN1P51911 297 aaKnown RBP13.49□□□□□ -0.25
RBFOX1-207ENST00000547338 SSBP2P81877 361 aaPredicted RBP13.49□□□□□ -0.25
RBFOX1-207ENST00000547338 FXYD3Q14802 87 aa13.49□□□□□ -0.25
RBFOX1-207ENST00000547338 ACTL10Q5JWF8 245 aa13.49□□□□□ -0.25
RBFOX1-207ENST00000547338 DNLZQ5SXM8 178 aa13.49□□□□□ -0.25
RBFOX1-207ENST00000547338 Q6ZS46 218 aa13.49□□□□□ -0.25
RBFOX1-207ENST00000547338 Q8N2B8 174 aa13.49□□□□□ -0.25
RBFOX1-207ENST00000547338 Q8N6K4 173 aa13.49□□□□□ -0.25
RBFOX1-207ENST00000547338 NECAP1Q8NC96 275 aa13.49□□□□□ -0.25
RBFOX1-207ENST00000547338 CHRDL1Q9BU40 450 aa13.49□□□□□ -0.25
RBFOX1-207ENST00000547338 TMEM14CQ9P0S9 112 aa13.49□□□□□ -0.25
RBFOX1-207ENST00000547338 NOTCH1P46531 2555 aa13.48□□□□□ -0.25
RBFOX1-207ENST00000547338 GGTLC3B5MD39 225 aa13.48□□□□□ -0.25
RBFOX1-207ENST00000547338 FCN1O00602 326 aa13.48□□□□□ -0.25
RBFOX1-207ENST00000547338 SCGB2A1O75556 95 aa13.48□□□□□ -0.25
RBFOX1-207ENST00000547338 CD24P25063 80 aa13.48□□□□□ -0.25
RBFOX1-207ENST00000547338 HIST2H2BDQ6DRA6 164 aa13.48□□□□□ -0.25
RBFOX1-207ENST00000547338 OR5T1Q8NG75 326 aa13.48□□□□□ -0.25
RBFOX1-207ENST00000547338 FXYD5Q96DB9 178 aa13.48□□□□□ -0.25
RBFOX1-207ENST00000547338 THYN1Q9P016 225 aa13.48□□□□□ -0.25
RBFOX1-207ENST00000547338 MRPL36Q9P0J6 103 aaKnown RBP13.48□□□□□ -0.25
RBFOX1-207ENST00000547338 TRBV9A0A0B4J1U6 114 aa13.47□□□□□ -0.25
RBFOX1-207ENST00000547338 IGLC1P0CG04 106 aa13.47□□□□□ -0.25
RBFOX1-207ENST00000547338 FAM106CPP0CH98 169 aa13.47□□□□□ -0.25
RBFOX1-207ENST00000547338 BRS3P32247 399 aa13.47□□□□□ -0.25
RBFOX1-207ENST00000547338 MYCNOSP40205 109 aa13.47□□□□□ -0.25
RBFOX1-207ENST00000547338 YPEL3P61236 119 aaPredicted RBP13.47□□□□□ -0.25
RBFOX1-207ENST00000547338 TTC9CQ8N5M4 171 aa13.47□□□□□ -0.25
RBFOX1-207ENST00000547338 RASL11BQ9BPW5 248 aa13.47□□□□□ -0.25
RBFOX1-207ENST00000547338 SERTAD4Q9NUC0 356 aa13.47□□□□□ -0.25
RBFOX1-207ENST00000547338 HIGD1AQ9Y241 93 aa13.47□□□□□ -0.25
RBFOX1-207ENST00000547338 ZNF320A2RRD8 509 aa13.46□□□□□ -0.25
RBFOX1-207ENST00000547338 CENPWQ5EE01 88 aa13.46□□□□□ -0.25
RBFOX1-207ENST00000547338 OR1B1Q8NGR6 318 aa13.46□□□□□ -0.25
RBFOX1-207ENST00000547338 WIPF2Q8TF74 440 aaPredicted RBP13.46□□□□□ -0.25
RBFOX1-207ENST00000547338 RBM14Q96PK6 669 aaKnown RBP13.46□□□□□ -0.25
RBFOX1-207ENST00000547338 ELOVL1Q9BW60 279 aa13.46□□□□□ -0.25
RBFOX1-207ENST00000547338 NPFFR1Q9GZQ6 430 aa13.46□□□□□ -0.25
RBFOX1-207ENST00000547338 TRAV5A0A0B4J249 113 aa13.45□□□□□ -0.26
RBFOX1-207ENST00000547338 ORM2P19652 201 aa13.45□□□□□ -0.26
RBFOX1-207ENST00000547338 S100A7P31151 101 aa13.45□□□□□ -0.26
RBFOX1-207ENST00000547338 ERVFC1-1P60608 527 aa13.45□□□□□ -0.26
RBFOX1-207ENST00000547338 BLCAPP62952 87 aa13.45□□□□□ -0.26
RBFOX1-207ENST00000547338 HES1Q14469 280 aa13.45□□□□□ -0.26
RBFOX1-207ENST00000547338 RPEL1Q2QD12 228 aa13.45□□□□□ -0.26
RBFOX1-207ENST00000547338 FAM231DQ6ZW35 169 aa13.45□□□□□ -0.26
RBFOX1-207ENST00000547338 ZNF329Q86UD4 541 aa13.45□□□□□ -0.26
RBFOX1-207ENST00000547338 TMEM183AQ8IXX5 376 aa13.45□□□□□ -0.26
RBFOX1-207ENST00000547338 HIST3H2BBQ8N257 126 aa13.45□□□□□ -0.26
RBFOX1-207ENST00000547338 K7EN84 100 aa13.44□□□□□ -0.26
RBFOX1-207ENST00000547338 AMY1AP04745 511 aa13.44□□□□□ -0.26
RBFOX1-207ENST00000547338 NBEAP1P0C6P0 100 aa13.44□□□□□ -0.26
RBFOX1-207ENST00000547338 HIST1H1BP16401 226 aaKnown RBP13.44□□□□□ -0.26
RBFOX1-207ENST00000547338 KLK9Q2XQG4 91 aa13.44□□□□□ -0.26
RBFOX1-207ENST00000547338 IGF2BP2-AS1Q96M15 143 aa13.44□□□□□ -0.26
RBFOX1-207ENST00000547338 TMEM68Q96MH6 324 aa13.44□□□□□ -0.26
RBFOX1-207ENST00000547338 MRPL27Q9P0M9 148 aaKnown RBP13.44□□□□□ -0.26
RBFOX1-207ENST00000547338 KLK9Q9UKQ9 250 aa13.44□□□□□ -0.26
RBFOX1-207ENST00000547338 KLF12Q9Y4X4 402 aa13.44□□□□□ -0.26
RBFOX1-207ENST00000547338 K7EIM0 57 aa13.44□□□□□ -0.26
RBFOX1-207ENST00000547338 PEX7O00628 323 aa13.44□□□□□ -0.26
RBFOX1-207ENST00000547338 TOMM40O96008 361 aa13.44□□□□□ -0.26
RBFOX1-207ENST00000547338 RD3LP0DJH9 198 aa13.44□□□□□ -0.26
RBFOX1-207ENST00000547338 TMEM95Q3KNT9 176 aa13.44□□□□□ -0.26
RBFOX1-207ENST00000547338 MORN5Q5VZ52 161 aa13.44□□□□□ -0.26
RBFOX1-207ENST00000547338 KLHDC1Q8N7A1 406 aa13.44□□□□□ -0.26
RBFOX1-207ENST00000547338 ARPC1AQ92747 370 aa13.44□□□□□ -0.26
RBFOX1-207ENST00000547338 TXN2Q99757 166 aa13.44□□□□□ -0.26
RBFOX1-207ENST00000547338 EPDR1Q9UM22 224 aa13.44□□□□□ -0.26
RBFOX1-207ENST00000547338 DMRT1Q9Y5R6 373 aa13.44□□□□□ -0.26
RBFOX1-207ENST00000547338 TRAPPC1Q9Y5R8 145 aa13.44□□□□□ -0.26
RBFOX1-207ENST00000547338 PGPEP1LA6NFU8 196 aa13.43□□□□□ -0.26
RBFOX1-207ENST00000547338 PSG1P11464 419 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms