RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 GATAD1Q8WUU5 269 aa10.73□□□□□ -0.69
DDX54-203ENST00000546869 SLC25A32Q9H2D1 315 aa10.73□□□□□ -0.69
DDX54-203ENST00000546869 PXMP4Q9Y6I8 212 aa10.73□□□□□ -0.69
DDX54-203ENST00000546869 LOC102724200A0A096LPH7 203 aaPredicted RBP10.72□□□□□ -0.69
DDX54-203ENST00000546869 G3V3Q6 166 aa10.72□□□□□ -0.69
DDX54-203ENST00000546869 SOCS3O14543 225 aa10.72□□□□□ -0.69
DDX54-203ENST00000546869 IFNA5P01569 189 aa10.72□□□□□ -0.69
DDX54-203ENST00000546869 SNRPD3P62318 126 aaKnown RBP10.72□□□□□ -0.69
DDX54-203ENST00000546869 FAM24BQ8N5W8 94 aa10.72□□□□□ -0.69
DDX54-203ENST00000546869 ZNF709Q8N972 641 aa10.72□□□□□ -0.69
DDX54-203ENST00000546869 INO80EQ8NBZ0 244 aaPredicted RBP10.72□□□□□ -0.69
DDX54-203ENST00000546869 C17orf77Q96MU5 243 aa10.72□□□□□ -0.69
DDX54-203ENST00000546869 UHRF2Q96PU4 802 aa10.72□□□□□ -0.69
DDX54-203ENST00000546869 TM2D3Q9BRN9 247 aa10.72□□□□□ -0.69
DDX54-203ENST00000546869 SCRT1Q9BWW7 348 aa10.72□□□□□ -0.69
DDX54-203ENST00000546869 SLC25A22Q9H936 323 aa10.72□□□□□ -0.69
DDX54-203ENST00000546869 TNFSF18Q9UNG2 199 aa10.72□□□□□ -0.69
DDX54-203ENST00000546869 A0A087X0K7 114 aa10.71□□□□□ -0.69
DDX54-203ENST00000546869 KIR2DL5BA0A0G2JN68 375 aa10.71□□□□□ -0.69
DDX54-203ENST00000546869 KIR2DL5BA0A0G2JPC4 375 aa10.71□□□□□ -0.69
DDX54-203ENST00000546869 ISLRO14498 428 aa10.71□□□□□ -0.69
DDX54-203ENST00000546869 MRPS12O15235 138 aaKnown RBP10.71□□□□□ -0.69
DDX54-203ENST00000546869 ID1P41134 155 aa10.71□□□□□ -0.69
DDX54-203ENST00000546869 PSMB3P49720 205 aa10.71□□□□□ -0.69
DDX54-203ENST00000546869 DEFB131AP59861 70 aa10.71□□□□□ -0.69
DDX54-203ENST00000546869 APRG1Q8IVJ8 170 aa10.71□□□□□ -0.69
DDX54-203ENST00000546869 KIR2DL5AQ8N109 375 aa10.71□□□□□ -0.69
DDX54-203ENST00000546869 KIR2DL5BQ8NHK3 375 aa10.71□□□□□ -0.69
DDX54-203ENST00000546869 SCGB1C1Q8TD33 95 aa10.71□□□□□ -0.69
DDX54-203ENST00000546869 RSG1Q9BU20 258 aa10.71□□□□□ -0.69
DDX54-203ENST00000546869 WFDC1Q9HC57 220 aa10.71□□□□□ -0.69
DDX54-203ENST00000546869 RNF222A6NCQ9 220 aa10.7□□□□□ -0.7
DDX54-203ENST00000546869 ZNF266Q14584 549 aa10.7□□□□□ -0.7
DDX54-203ENST00000546869 LEMD1Q68G75 181 aa10.7□□□□□ -0.7
DDX54-203ENST00000546869 BPIFA4PQ86YQ2 179 aa10.7□□□□□ -0.7
DDX54-203ENST00000546869 ASCL2Q99929 193 aa10.7□□□□□ -0.7
DDX54-203ENST00000546869 SMIM3Q9BZL3 60 aa10.7□□□□□ -0.7
DDX54-203ENST00000546869 UBE2CO00762 179 aa10.69□□□□□ -0.7
DDX54-203ENST00000546869 ZNF688P0C7X2 276 aa10.69□□□□□ -0.7
DDX54-203ENST00000546869 CXCL2P19875 107 aa10.69□□□□□ -0.7
DDX54-203ENST00000546869 APOC4P55056 127 aa10.69□□□□□ -0.7
DDX54-203ENST00000546869 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.69□□□□□ -0.7
DDX54-203ENST00000546869 ZMAT4Q9H898 229 aa10.69□□□□□ -0.7
DDX54-203ENST00000546869 TIMM9Q9Y5J7 89 aa10.69□□□□□ -0.7
DDX54-203ENST00000546869 TGP01266 2768 aa10.69□□□□□ -0.7
DDX54-203ENST00000546869 FXYD6-FXYD2A0A087WZ82 144 aa10.68□□□□□ -0.7
DDX54-203ENST00000546869 HMSDA8MTL9 139 aa10.68□□□□□ -0.7
DDX54-203ENST00000546869 ATF4P18848 351 aaPredicted RBP10.68□□□□□ -0.7
DDX54-203ENST00000546869 ZNF124Q15973 351 aa10.68□□□□□ -0.7
DDX54-203ENST00000546869 PSMG4Q5JS54 123 aa10.68□□□□□ -0.7
DDX54-203ENST00000546869 SPATA25Q9BR10 227 aa10.68□□□□□ -0.7
DDX54-203ENST00000546869 TMEM14CQ9P0S9 112 aa10.68□□□□□ -0.7
DDX54-203ENST00000546869 TAAR5O14804 337 aa10.67□□□□□ -0.7
DDX54-203ENST00000546869 GUK1Q16774 197 aa10.67□□□□□ -0.7
DDX54-203ENST00000546869 MORN5Q5VZ52 161 aa10.67□□□□□ -0.7
DDX54-203ENST00000546869 SPATA31B1PQ5VZV4 182 aa10.67□□□□□ -0.7
DDX54-203ENST00000546869 Q6ZWC4 215 aa10.67□□□□□ -0.7
DDX54-203ENST00000546869 C16orf92Q96LL3 132 aa10.67□□□□□ -0.7
DDX54-203ENST00000546869 MRPL32Q9BYC8 188 aaKnown RBP10.67□□□□□ -0.7
DDX54-203ENST00000546869 HRH4Q9H3N8 390 aa10.67□□□□□ -0.7
DDX54-203ENST00000546869 IGLC2P0DOY2 106 aa10.66□□□□□ -0.7
DDX54-203ENST00000546869 ZNF345Q14585 488 aa10.66□□□□□ -0.7
DDX54-203ENST00000546869 GCSAMLQ5JQS6 135 aa10.66□□□□□ -0.7
DDX54-203ENST00000546869 FAM78BQ5VT40 261 aa10.66□□□□□ -0.7
DDX54-203ENST00000546869 TRPT1Q86TN4 253 aaKnown RBP10.66□□□□□ -0.7
DDX54-203ENST00000546869 STHQ8IWL8 128 aa10.66□□□□□ -0.7
DDX54-203ENST00000546869 OR2G3Q8NGZ4 309 aa10.66□□□□□ -0.7
DDX54-203ENST00000546869 CLUHP3Q96NS8 147 aa10.66□□□□□ -0.7
DDX54-203ENST00000546869 PSMG3Q9BT73 122 aaPredicted RBP10.66□□□□□ -0.7
DDX54-203ENST00000546869 CSTL1Q9H114 145 aa10.66□□□□□ -0.7
DDX54-203ENST00000546869 CLEC5AQ9NY25 188 aa10.66□□□□□ -0.7
DDX54-203ENST00000546869 TP53TG1Q9Y2A0 90 aa10.66□□□□□ -0.7
DDX54-203ENST00000546869 U3KQK5 164 aa10.66□□□□□ -0.7
DDX54-203ENST00000546869 TRAV8-2A0A0B4J237 113 aa10.65□□□□□ -0.7
DDX54-203ENST00000546869 TRAV5A0A0B4J249 113 aa10.65□□□□□ -0.7
DDX54-203ENST00000546869 ZNF253O75346 499 aa10.65□□□□□ -0.7
DDX54-203ENST00000546869 SERF2P84101 59 aa10.65□□□□□ -0.7
DDX54-203ENST00000546869 TMEM41BQ5BJD5 291 aa10.65□□□□□ -0.7
DDX54-203ENST00000546869 MORN3Q6PF18 240 aaPredicted RBP10.65□□□□□ -0.7
DDX54-203ENST00000546869 LCN15Q6UWW0 184 aa10.65□□□□□ -0.7
DDX54-203ENST00000546869 FOXI2Q6ZQN5 318 aa10.65□□□□□ -0.7
DDX54-203ENST00000546869 ST6GAL2Q96JF0 529 aa10.65□□□□□ -0.7
DDX54-203ENST00000546869 SLC50A1Q9BRV3 221 aa10.65□□□□□ -0.7
DDX54-203ENST00000546869 MFFQ9GZY8 342 aa10.65□□□□□ -0.7
DDX54-203ENST00000546869 SAV1Q9H4B6 383 aaPredicted RBP10.65□□□□□ -0.7
DDX54-203ENST00000546869 RPRMQ9NS64 109 aa10.65□□□□□ -0.7
DDX54-203ENST00000546869 FUT9Q9Y231 359 aa10.65□□□□□ -0.7
DDX54-203ENST00000546869 BORCS7-ASMTA0A0B4J1R7 106 aa10.64□□□□□ -0.71
DDX54-203ENST00000546869 H3BMM0 161 aa10.64□□□□□ -0.71
DDX54-203ENST00000546869 ARPC5O15511 151 aa10.64□□□□□ -0.71
DDX54-203ENST00000546869 JTBO76095 146 aa10.64□□□□□ -0.71
DDX54-203ENST00000546869 SPP1P10451 314 aa10.64□□□□□ -0.71
DDX54-203ENST00000546869 HLA-DRB4P13762 266 aa10.64□□□□□ -0.71
DDX54-203ENST00000546869 FFAR4Q5NUL3 377 aa10.64□□□□□ -0.71
DDX54-203ENST00000546869 TCTE3Q8IZS6 198 aa10.64□□□□□ -0.71
DDX54-203ENST00000546869 OR11H4Q8NGC9 324 aa10.64□□□□□ -0.71
DDX54-203ENST00000546869 SAT2Q96F10 170 aaPredicted RBP10.64□□□□□ -0.71
DDX54-203ENST00000546869 FAM167A-AS1Q96KT0 104 aa10.64□□□□□ -0.71
DDX54-203ENST00000546869 ZNF331Q9NQX6 463 aaPredicted RBP10.64□□□□□ -0.71
DDX54-203ENST00000546869 HLA-DRB4X5D2U9 266 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms