RNA–Protein interactions for RNA: ENST00000546820.5

PTCH1-213, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 864 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-213ENST00000546820 ZNF345Q14585 488 aa10.3□□□□□ -0.76
PTCH1-213ENST00000546820 FFAR4Q5NUL3 377 aa10.3□□□□□ -0.76
PTCH1-213ENST00000546820 TMEM37Q8WXS4 190 aa10.3□□□□□ -0.76
PTCH1-213ENST00000546820 RSG1Q9BU20 258 aa10.3□□□□□ -0.76
PTCH1-213ENST00000546820 SEPSECSQ9HD40 501 aaKnown RBP10.3□□□□□ -0.76
PTCH1-213ENST00000546820 TIMM9Q9Y5J7 89 aa10.3□□□□□ -0.76
PTCH1-213ENST00000546820 FBN3Q75N90 2809 aa10.29□□□□□ -0.76
PTCH1-213ENST00000546820 K7EQG2 157 aa10.29□□□□□ -0.76
PTCH1-213ENST00000546820 ATF4P18848 351 aaPredicted RBP10.29□□□□□ -0.76
PTCH1-213ENST00000546820 ID1P41134 155 aa10.29□□□□□ -0.76
PTCH1-213ENST00000546820 SNRPD3P62318 126 aaKnown RBP10.29□□□□□ -0.76
PTCH1-213ENST00000546820 ACOT6Q3I5F7 207 aaPredicted RBP10.29□□□□□ -0.76
PTCH1-213ENST00000546820 LEMD1Q68G75 181 aa10.29□□□□□ -0.76
PTCH1-213ENST00000546820 BPIFA4PQ86YQ2 179 aa10.29□□□□□ -0.76
PTCH1-213ENST00000546820 KCNRGQ8N5I3 272 aa10.29□□□□□ -0.76
PTCH1-213ENST00000546820 OR11H4Q8NGC9 324 aa10.29□□□□□ -0.76
PTCH1-213ENST00000546820 GNPNAT1Q96EK6 184 aaPredicted RBP10.29□□□□□ -0.76
PTCH1-213ENST00000546820 SCRT1Q9BWW7 348 aa10.29□□□□□ -0.76
PTCH1-213ENST00000546820 SLC25A32Q9H2D1 315 aa10.29□□□□□ -0.76
PTCH1-213ENST00000546820 A0A1B0GVG6 124 aa10.28□□□□□ -0.76
PTCH1-213ENST00000546820 C1QBP02746 253 aa10.28□□□□□ -0.76
PTCH1-213ENST00000546820 SERF2P84101 59 aa10.28□□□□□ -0.76
PTCH1-213ENST00000546820 FAM78BQ5VT40 261 aa10.28□□□□□ -0.76
PTCH1-213ENST00000546820 RPL7L1Q6DKI1 246 aaKnown RBP10.28□□□□□ -0.76
PTCH1-213ENST00000546820 HSD17B11Q8NBQ5 300 aa10.28□□□□□ -0.76
PTCH1-213ENST00000546820 DCANP1Q8TF63 244 aa10.28□□□□□ -0.76
PTCH1-213ENST00000546820 HYLS1Q96M11 299 aa10.28□□□□□ -0.76
PTCH1-213ENST00000546820 ARPC5LQ9BPX5 153 aa10.28□□□□□ -0.76
PTCH1-213ENST00000546820 KANTRA0A1W2PQU2 76 aa10.27□□□□□ -0.77
PTCH1-213ENST00000546820 A8MZ25 164 aa10.27□□□□□ -0.77
PTCH1-213ENST00000546820 MBP02144 154 aa10.27□□□□□ -0.77
PTCH1-213ENST00000546820 IGHV4-30-4P0DP06 118 aa10.27□□□□□ -0.77
PTCH1-213ENST00000546820 DEFB125Q8N687 156 aa10.27□□□□□ -0.77
PTCH1-213ENST00000546820 LRRC20Q8TCA0 184 aa10.27□□□□□ -0.77
PTCH1-213ENST00000546820 PSMG3Q9BT73 122 aaPredicted RBP10.27□□□□□ -0.77
PTCH1-213ENST00000546820 MRPL32Q9BYC8 188 aaKnown RBP10.27□□□□□ -0.77
PTCH1-213ENST00000546820 UBQLN2Q9UHD9 624 aa10.27□□□□□ -0.77
PTCH1-213ENST00000546820 A0A1W2PPV4 95 aa10.26□□□□□ -0.77
PTCH1-213ENST00000546820 PFDN1O60925 122 aa10.26□□□□□ -0.77
PTCH1-213ENST00000546820 M6PRP20645 277 aa10.26□□□□□ -0.77
PTCH1-213ENST00000546820 ATP6V0CP27449 155 aa10.26□□□□□ -0.77
PTCH1-213ENST00000546820 RHOBP62745 196 aa10.26□□□□□ -0.77
PTCH1-213ENST00000546820 EIF5AP63241 154 aaKnown RBP10.26□□□□□ -0.77
PTCH1-213ENST00000546820 OR2G3Q8NGZ4 309 aa10.26□□□□□ -0.77
PTCH1-213ENST00000546820 C16orf92Q96LL3 132 aa10.26□□□□□ -0.77
PTCH1-213ENST00000546820 SRD5A3Q9H8P0 318 aa10.26□□□□□ -0.77
PTCH1-213ENST00000546820 C19orf73Q9NVV2 129 aa10.26□□□□□ -0.77
PTCH1-213ENST00000546820 ISLRO14498 428 aa10.25□□□□□ -0.77
PTCH1-213ENST00000546820 ZNF688P0C7X2 276 aa10.25□□□□□ -0.77
PTCH1-213ENST00000546820 CXCL2P19875 107 aa10.25□□□□□ -0.77
PTCH1-213ENST00000546820 C4BPBP20851 252 aa10.25□□□□□ -0.77
PTCH1-213ENST00000546820 TAS2R45P59539 299 aa10.25□□□□□ -0.77
PTCH1-213ENST00000546820 DEFB131AP59861 70 aa10.25□□□□□ -0.77
PTCH1-213ENST00000546820 GUK1Q16774 197 aa10.25□□□□□ -0.77
PTCH1-213ENST00000546820 ODF3L2Q3SX64 289 aa10.25□□□□□ -0.77
PTCH1-213ENST00000546820 GCSAMLQ5JQS6 135 aa10.25□□□□□ -0.77
PTCH1-213ENST00000546820 TMUB2Q71RG4 321 aa10.25□□□□□ -0.77
PTCH1-213ENST00000546820 OR10G4Q8NGN3 311 aa10.25□□□□□ -0.77
PTCH1-213ENST00000546820 OR10G9Q8NGN4 311 aa10.25□□□□□ -0.77
PTCH1-213ENST00000546820 OR10G7Q8NGN6 311 aa10.25□□□□□ -0.77
PTCH1-213ENST00000546820 MAP6D1Q9H9H5 199 aa10.25□□□□□ -0.77
PTCH1-213ENST00000546820 FUT9Q9Y231 359 aa10.25□□□□□ -0.77
PTCH1-213ENST00000546820 A0A087X0K7 114 aa10.24□□□□□ -0.77
PTCH1-213ENST00000546820 TRAV5A0A0B4J249 113 aa10.24□□□□□ -0.77
PTCH1-213ENST00000546820 BCL2L11O43521 198 aa10.24□□□□□ -0.77
PTCH1-213ENST00000546820 FRMD6-AS1P0C7T7 363 aa10.24□□□□□ -0.77
PTCH1-213ENST00000546820 PSMB3P49720 205 aa10.24□□□□□ -0.77
PTCH1-213ENST00000546820 ZFP69Q49AA0 526 aa10.24□□□□□ -0.77
PTCH1-213ENST00000546820 PSMG4Q5JS54 123 aa10.24□□□□□ -0.77
PTCH1-213ENST00000546820 MORN5Q5VZ52 161 aa10.24□□□□□ -0.77
PTCH1-213ENST00000546820 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.24□□□□□ -0.77
PTCH1-213ENST00000546820 APRG1Q8IVJ8 170 aa10.24□□□□□ -0.77
PTCH1-213ENST00000546820 LINC00052Q96N35 136 aa10.24□□□□□ -0.77
PTCH1-213ENST00000546820 HRH4Q9H3N8 390 aa10.24□□□□□ -0.77
PTCH1-213ENST00000546820 CYTL1Q9NRR1 136 aa10.24□□□□□ -0.77
PTCH1-213ENST00000546820 TMEM14CQ9P0S9 112 aa10.24□□□□□ -0.77
PTCH1-213ENST00000546820 MRPS12O15235 138 aaKnown RBP10.23□□□□□ -0.77
PTCH1-213ENST00000546820 LCN15Q6UWW0 184 aa10.23□□□□□ -0.77
PTCH1-213ENST00000546820 MIR17HGQ75NE6 70 aa10.23□□□□□ -0.77
PTCH1-213ENST00000546820 FAM24BQ8N5W8 94 aa10.23□□□□□ -0.77
PTCH1-213ENST00000546820 ZNF471Q9BX82 626 aaPredicted RBP10.23□□□□□ -0.77
PTCH1-213ENST00000546820 WFDC10AQ9H1F0 79 aa10.23□□□□□ -0.77
PTCH1-213ENST00000546820 CLEC5AQ9NY25 188 aa10.23□□□□□ -0.77
PTCH1-213ENST00000546820 RFNGQ9Y644 331 aa10.23□□□□□ -0.77
PTCH1-213ENST00000546820 MEGF8Q7Z7M0 2845 aa10.22□□□□□ -0.77
PTCH1-213ENST00000546820 LOC102724200A0A096LPH7 203 aaPredicted RBP10.22□□□□□ -0.77
PTCH1-213ENST00000546820 HIST1H1EP10412 219 aaKnown RBP10.22□□□□□ -0.77
PTCH1-213ENST00000546820 LGALSLQ3ZCW2 172 aaPredicted RBP10.22□□□□□ -0.77
PTCH1-213ENST00000546820 KHDC3LQ587J8 217 aa10.22□□□□□ -0.77
PTCH1-213ENST00000546820 STHQ8IWL8 128 aa10.22□□□□□ -0.77
PTCH1-213ENST00000546820 B9D2Q9BPU9 175 aa10.22□□□□□ -0.77
PTCH1-213ENST00000546820 SLC50A1Q9BRV3 221 aa10.22□□□□□ -0.77
PTCH1-213ENST00000546820 PAXXQ9BUH6 204 aa10.22□□□□□ -0.77
PTCH1-213ENST00000546820 SH3BGRL3Q9H299 93 aa10.22□□□□□ -0.77
PTCH1-213ENST00000546820 OR51M1Q9H341 326 aa10.22□□□□□ -0.77
PTCH1-213ENST00000546820 RPRMQ9NS64 109 aa10.22□□□□□ -0.77
PTCH1-213ENST00000546820 SOCS3O14543 225 aa10.21□□□□□ -0.77
PTCH1-213ENST00000546820 NHLRC4P0CG21 123 aaPredicted RBP10.21□□□□□ -0.77
PTCH1-213ENST00000546820 IGLC2P0DOY2 106 aa10.21□□□□□ -0.77
PTCH1-213ENST00000546820 SPP1P10451 314 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms