RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 JMJD8Q96S16 334 aa9.93□□□□□ -0.82
NPC1L1-204ENST00000546276 IGHV3OR16-12A0A075B7B8 117 aa9.93□□□□□ -0.82
NPC1L1-204ENST00000546276 GGTLC3B5MD39 225 aa9.93□□□□□ -0.82
NPC1L1-204ENST00000546276 TDGF1P13385 188 aa9.93□□□□□ -0.82
NPC1L1-204ENST00000546276 GAGE1Q13065 139 aa9.93□□□□□ -0.82
NPC1L1-204ENST00000546276 TEX43Q6ZNM6 134 aa9.93□□□□□ -0.82
NPC1L1-204ENST00000546276 SIGLEC9Q9Y336 463 aa9.93□□□□□ -0.82
NPC1L1-204ENST00000546276 ZNF503-AS2A6NEH8 195 aa9.93□□□□□ -0.82
NPC1L1-204ENST00000546276 IGHG3P01860 377 aa9.93□□□□□ -0.82
NPC1L1-204ENST00000546276 CT83Q5H943 113 aa9.93□□□□□ -0.82
NPC1L1-204ENST00000546276 NOTCH4Q99466 2003 aa9.93□□□□□ -0.82
NPC1L1-204ENST00000546276 AKAP6Q13023 2319 aa9.93□□□□□ -0.82
NPC1L1-204ENST00000546276 DENND4CQ5VZ89 1909 aa9.93□□□□□ -0.82
NPC1L1-204ENST00000546276 FAM231BA6NCW3 169 aa9.93□□□□□ -0.82
NPC1L1-204ENST00000546276 MMP23AO75900 390 aa9.93□□□□□ -0.82
NPC1L1-204ENST00000546276 SUMO2P61956 95 aaKnown RBP9.93□□□□□ -0.82
NPC1L1-204ENST00000546276 FAM231DQ6ZW35 169 aa9.92□□□□□ -0.82
NPC1L1-204ENST00000546276 SELENOKQ9Y6D0 94 aa9.92□□□□□ -0.82
NPC1L1-204ENST00000546276 DOCK9Q9BZ29 2069 aa9.92□□□□□ -0.82
NPC1L1-204ENST00000546276 RPL15P61313 204 aaKnown RBP9.92□□□□□ -0.82
NPC1L1-204ENST00000546276 SLAQ13239 276 aa9.92□□□□□ -0.82
NPC1L1-204ENST00000546276 CENPVQ7Z7K6 275 aaPredicted RBP9.92□□□□□ -0.82
NPC1L1-204ENST00000546276 PYGO2Q9BRQ0 406 aa9.92□□□□□ -0.82
NPC1L1-204ENST00000546276 SMIM27A0A1W2PRY6 76 aa9.92□□□□□ -0.82
NPC1L1-204ENST00000546276 HEATR1Q9H583 2144 aaKnown RBP9.92□□□□□ -0.82
NPC1L1-204ENST00000546276 RIF1Q5UIP0 2472 aaKnown RBP9.92□□□□□ -0.82
NPC1L1-204ENST00000546276 SCGB1A1P11684 91 aa9.91□□□□□ -0.82
NPC1L1-204ENST00000546276 IFI27P40305 119 aaPredicted RBP9.91□□□□□ -0.82
NPC1L1-204ENST00000546276 KLF17Q5JT82 389 aaPredicted RBP9.91□□□□□ -0.82
NPC1L1-204ENST00000546276 AMN1Q8IY45 258 aa9.91□□□□□ -0.82
NPC1L1-204ENST00000546276 DIDO1Q9BTC0 2240 aaKnown RBP9.91□□□□□ -0.82
NPC1L1-204ENST00000546276 TRAV8-2A0A0B4J237 113 aa9.91□□□□□ -0.82
NPC1L1-204ENST00000546276 TSPAN13O95857 204 aa9.91□□□□□ -0.82
NPC1L1-204ENST00000546276 RRN3P1Q2M238 152 aa9.91□□□□□ -0.82
NPC1L1-204ENST00000546276 TMEM249Q2WGJ8 235 aa9.91□□□□□ -0.82
NPC1L1-204ENST00000546276 NUP37Q8NFH4 326 aa9.91□□□□□ -0.82
NPC1L1-204ENST00000546276 A0A1W2PPI3 338 aa9.91□□□□□ -0.82
NPC1L1-204ENST00000546276 MBD3L4A6NDZ8 208 aaPredicted RBP9.91□□□□□ -0.82
NPC1L1-204ENST00000546276 MBD3L3A6NE82 208 aaPredicted RBP9.91□□□□□ -0.82
NPC1L1-204ENST00000546276 MBD3L5A6NJ08 208 aaPredicted RBP9.91□□□□□ -0.82
NPC1L1-204ENST00000546276 SMAD7O15105 426 aaKnown RBP9.91□□□□□ -0.82
NPC1L1-204ENST00000546276 ARMS2P0C7Q2 107 aa9.91□□□□□ -0.82
NPC1L1-204ENST00000546276 MBD3L2Q8NHZ7 208 aaPredicted RBP9.91□□□□□ -0.82
NPC1L1-204ENST00000546276 IGHV3-11P01762 117 aa9.91□□□□□ -0.82
NPC1L1-204ENST00000546276 ATP5J2P56134 94 aa9.91□□□□□ -0.82
NPC1L1-204ENST00000546276 NDUFA4L2Q9NRX3 87 aa9.91□□□□□ -0.82
NPC1L1-204ENST00000546276 DOCK8Q8NF50 2099 aa9.9□□□□□ -0.82
NPC1L1-204ENST00000546276 ESDP10768 282 aa9.9□□□□□ -0.82
NPC1L1-204ENST00000546276 Q8TAT8 98 aa9.9□□□□□ -0.82
NPC1L1-204ENST00000546276 GLMPQ8WWB7 406 aa9.9□□□□□ -0.82
NPC1L1-204ENST00000546276 PSMB11A5LHX3 300 aa9.9□□□□□ -0.82
NPC1L1-204ENST00000546276 CD7P09564 240 aa9.9□□□□□ -0.82
NPC1L1-204ENST00000546276 Q6ZR03 302 aa9.9□□□□□ -0.82
NPC1L1-204ENST00000546276 SHANK1Q9Y566 2161 aa9.9□□□□□ -0.82
NPC1L1-204ENST00000546276 H3BRM9 83 aa9.9□□□□□ -0.82
NPC1L1-204ENST00000546276 DNAL4O96015 105 aa9.9□□□□□ -0.82
NPC1L1-204ENST00000546276 KLRB1Q12918 225 aa9.9□□□□□ -0.82
NPC1L1-204ENST00000546276 ZNF407Q9C0G0 2248 aa9.9□□□□□ -0.82
NPC1L1-204ENST00000546276 LY6G6EA0A0G2JKS1 128 aa9.9□□□□□ -0.83
NPC1L1-204ENST00000546276 LINC01549A6NIU2 74 aa9.9□□□□□ -0.83
NPC1L1-204ENST00000546276 A8MWV9 139 aa9.9□□□□□ -0.83
NPC1L1-204ENST00000546276 SHANK2-AS3Q9BTD1 123 aa9.9□□□□□ -0.83
NPC1L1-204ENST00000546276 NCOR1P1Q9H4R4 102 aa9.9□□□□□ -0.83
NPC1L1-204ENST00000546276 U3KQA8 63 aa9.9□□□□□ -0.83
NPC1L1-204ENST00000546276 C15orf65H3BRN8 121 aa9.89□□□□□ -0.83
NPC1L1-204ENST00000546276 IGLL1P15814 213 aa9.89□□□□□ -0.83
NPC1L1-204ENST00000546276 CD300EQ496F6 205 aaPredicted RBP9.89□□□□□ -0.83
NPC1L1-204ENST00000546276 Q6ZSR3 168 aa9.89□□□□□ -0.83
NPC1L1-204ENST00000546276 C10orf126Q8N4M7 172 aa9.89□□□□□ -0.83
NPC1L1-204ENST00000546276 ZNRD1Q9P1U0 126 aa9.89□□□□□ -0.83
NPC1L1-204ENST00000546276 SPTBN1Q01082 2364 aaKnown RBP9.89□□□□□ -0.83
NPC1L1-204ENST00000546276 TMEM262E9PQX1 116 aa9.89□□□□□ -0.83
NPC1L1-204ENST00000546276 BUB1B-PAK6H3BSN5 160 aa9.89□□□□□ -0.83
NPC1L1-204ENST00000546276 OVOL1O14753 267 aa9.89□□□□□ -0.83
NPC1L1-204ENST00000546276 PLNP26678 52 aa9.89□□□□□ -0.83
NPC1L1-204ENST00000546276 OCIAD2Q56VL3 154 aa9.89□□□□□ -0.83
NPC1L1-204ENST00000546276 Q5PR19 223 aa9.89□□□□□ -0.83
NPC1L1-204ENST00000546276 ZC2HC1BQ5TFG8 222 aa9.89□□□□□ -0.83
NPC1L1-204ENST00000546276 CST9LQ9H4G1 147 aa9.89□□□□□ -0.83
NPC1L1-204ENST00000546276 DOCK7Q96N67 2140 aa9.89□□□□□ -0.83
NPC1L1-204ENST00000546276 KIR2DL5BA0A0G2JN68 375 aa9.89□□□□□ -0.83
NPC1L1-204ENST00000546276 KIR2DL5BA0A0G2JPC4 375 aa9.89□□□□□ -0.83
NPC1L1-204ENST00000546276 C15orf32Q32M92 178 aa9.89□□□□□ -0.83
NPC1L1-204ENST00000546276 KIR2DL5AQ8N109 375 aa9.89□□□□□ -0.83
NPC1L1-204ENST00000546276 SPTBN2O15020 2390 aa9.89□□□□□ -0.83
NPC1L1-204ENST00000546276 SMKR1H3BMG3 65 aa9.89□□□□□ -0.83
NPC1L1-204ENST00000546276 TMEM158Q8WZ71 300 aa9.89□□□□□ -0.83
NPC1L1-204ENST00000546276 TANC1Q9C0D5 1861 aa9.88□□□□□ -0.83
NPC1L1-204ENST00000546276 C5orf64Q2M2E5 130 aa9.88□□□□□ -0.83
NPC1L1-204ENST00000546276 VWC2Q2TAL6 325 aa9.88□□□□□ -0.83
NPC1L1-204ENST00000546276 ZNF672Q499Z4 452 aaPredicted RBP9.88□□□□□ -0.83
NPC1L1-204ENST00000546276 SIGLEC15Q6ZMC9 328 aa9.88□□□□□ -0.83
NPC1L1-204ENST00000546276 STPG4Q8N801 248 aa9.88□□□□□ -0.83
NPC1L1-204ENST00000546276 COL4A3Q01955 1670 aa9.88□□□□□ -0.83
NPC1L1-204ENST00000546276 PAX8Q06710 450 aa9.88□□□□□ -0.83
NPC1L1-204ENST00000546276 ZNF474Q6S9Z5 364 aaPredicted RBP9.88□□□□□ -0.83
NPC1L1-204ENST00000546276 SPACA3Q8IXA5 215 aa9.88□□□□□ -0.83
NPC1L1-204ENST00000546276 TICRRQ7Z2Z1 1910 aa9.88□□□□□ -0.83
NPC1L1-204ENST00000546276 PDE6HQ13956 83 aa9.88□□□□□ -0.83
NPC1L1-204ENST00000546276 CHAC1Q9BUX1 264 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms