RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 ACTL10Q5JWF8 245 aa8.69□□□□□ -1.02
YBX3-217ENST00000546164 S100A7AQ86SG5 101 aa8.69□□□□□ -1.02
YBX3-217ENST00000546164 C17orf77Q96MU5 243 aa8.69□□□□□ -1.02
YBX3-217ENST00000546164 SLC25A39Q9BZJ4 359 aaPredicted RBP8.69□□□□□ -1.02
YBX3-217ENST00000546164 HIGD1AQ9Y241 93 aa8.69□□□□□ -1.02
YBX3-217ENST00000546164 TENM2Q9NT68 2774 aa8.69□□□□□ -1.02
YBX3-217ENST00000546164 AGRNO00468 2067 aa8.68□□□□□ -1.02
YBX3-217ENST00000546164 IGSF23A1L1A6 192 aa8.68□□□□□ -1.02
YBX3-217ENST00000546164 SIX6O95475 246 aa8.68□□□□□ -1.02
YBX3-217ENST00000546164 PTTG1O95997 202 aa8.68□□□□□ -1.02
YBX3-217ENST00000546164 GIG44P09565 113 aaPredicted RBP8.68□□□□□ -1.02
YBX3-217ENST00000546164 HBG1P69891 147 aa8.68□□□□□ -1.02
YBX3-217ENST00000546164 HBG2P69892 147 aa8.68□□□□□ -1.02
YBX3-217ENST00000546164 ATP6V1FQ16864 119 aa8.68□□□□□ -1.02
YBX3-217ENST00000546164 STX12Q86Y82 276 aa8.68□□□□□ -1.02
YBX3-217ENST00000546164 TMEM217Q8N7C4 229 aa8.68□□□□□ -1.02
YBX3-217ENST00000546164 MGST2Q99735 147 aa8.68□□□□□ -1.02
YBX3-217ENST00000546164 SCRT1Q9BWW7 348 aa8.68□□□□□ -1.02
YBX3-217ENST00000546164 SLC25A22Q9H936 323 aa8.68□□□□□ -1.02
YBX3-217ENST00000546164 UQCC1Q9NVA1 299 aa8.68□□□□□ -1.02
YBX3-217ENST00000546164 DOK5Q9P104 306 aa8.68□□□□□ -1.02
YBX3-217ENST00000546164 RNF24Q9Y225 148 aa8.68□□□□□ -1.02
YBX3-217ENST00000546164 WDR83OSQ9Y284 106 aa8.68□□□□□ -1.02
YBX3-217ENST00000546164 E5RGE8 158 aa8.67□□□□□ -1.02
YBX3-217ENST00000546164 H3BMM0 161 aa8.67□□□□□ -1.02
YBX3-217ENST00000546164 RLN2P04090 185 aa8.67□□□□□ -1.02
YBX3-217ENST00000546164 OR5G3P0C626 314 aa8.67□□□□□ -1.02
YBX3-217ENST00000546164 HLA-DRB4P13762 266 aa8.67□□□□□ -1.02
YBX3-217ENST00000546164 RPL7P18124 248 aaKnown RBP8.67□□□□□ -1.02
YBX3-217ENST00000546164 CAMLGP49069 296 aa8.67□□□□□ -1.02
YBX3-217ENST00000546164 H2BFSP57053 126 aa8.67□□□□□ -1.02
YBX3-217ENST00000546164 RAB31Q13636 194 aa8.67□□□□□ -1.02
YBX3-217ENST00000546164 PATE2Q6UY27 113 aa8.67□□□□□ -1.02
YBX3-217ENST00000546164 FOXI2Q6ZQN5 318 aa8.67□□□□□ -1.02
YBX3-217ENST00000546164 CHAC2Q8WUX2 184 aa8.67□□□□□ -1.02
YBX3-217ENST00000546164 CLUHP3Q96NS8 147 aa8.67□□□□□ -1.02
YBX3-217ENST00000546164 RSG1Q9BU20 258 aa8.67□□□□□ -1.02
YBX3-217ENST00000546164 ARL6Q9H0F7 186 aa8.67□□□□□ -1.02
YBX3-217ENST00000546164 ARV1Q9H2C2 271 aa8.67□□□□□ -1.02
YBX3-217ENST00000546164 HLA-DRB4X5D2U9 266 aa8.67□□□□□ -1.02
YBX3-217ENST00000546164 LYSTQ99698 3801 aa8.66□□□□□ -1.02
YBX3-217ENST00000546164 ELOA3CA0A087WX78 387 aaPredicted RBP8.66□□□□□ -1.02
YBX3-217ENST00000546164 A0A0J9YWU9 116 aa8.66□□□□□ -1.02
YBX3-217ENST00000546164 H0YIZ8 118 aa8.66□□□□□ -1.02
YBX3-217ENST00000546164 SSNA1O43805 119 aa8.66□□□□□ -1.02
YBX3-217ENST00000546164 C4BPBP20851 252 aa8.66□□□□□ -1.02
YBX3-217ENST00000546164 SPATA31B1PQ5VZV4 182 aa8.66□□□□□ -1.02
YBX3-217ENST00000546164 ZFAND6Q6FIF0 208 aa8.66□□□□□ -1.02
YBX3-217ENST00000546164 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.66□□□□□ -1.02
YBX3-217ENST00000546164 PPP1R1CQ8WVI7 109 aa8.66□□□□□ -1.02
YBX3-217ENST00000546164 LINC00052Q96N35 136 aa8.66□□□□□ -1.02
YBX3-217ENST00000546164 UHRF2Q96PU4 802 aa8.66□□□□□ -1.02
YBX3-217ENST00000546164 RARRES2Q99969 163 aa8.66□□□□□ -1.02
YBX3-217ENST00000546164 SLC25A31Q9H0C2 315 aa8.66□□□□□ -1.02
YBX3-217ENST00000546164 SAV1Q9H4B6 383 aaPredicted RBP8.66□□□□□ -1.02
YBX3-217ENST00000546164 OR5AC2Q9NZP5 309 aa8.66□□□□□ -1.02
YBX3-217ENST00000546164 A0A087X0K7 114 aa8.65□□□□□ -1.02
YBX3-217ENST00000546164 MRPS12O15235 138 aaKnown RBP8.65□□□□□ -1.02
YBX3-217ENST00000546164 RPL29P47914 159 aaKnown RBP8.65□□□□□ -1.02
YBX3-217ENST00000546164 NUTF2P61970 127 aaKnown RBP8.65□□□□□ -1.02
YBX3-217ENST00000546164 EWSR1Q01844 656 aaKnown RBP eCLIP8.65□□□□□ -1.02
YBX3-217ENST00000546164 BAXQ07812 192 aa8.65□□□□□ -1.02
YBX3-217ENST00000546164 GDF5OSQ5U4N7 250 aa8.65□□□□□ -1.02
YBX3-217ENST00000546164 CSNK1G2-AS1Q8NCQ2 148 aa8.65□□□□□ -1.02
YBX3-217ENST00000546164 OR11H2Q8NH07 326 aa8.65□□□□□ -1.02
YBX3-217ENST00000546164 TMEM37Q8WXS4 190 aa8.65□□□□□ -1.02
YBX3-217ENST00000546164 C16orf92Q96LL3 132 aa8.65□□□□□ -1.02
YBX3-217ENST00000546164 C11orf68Q9H3H3 251 aaKnown RBP8.65□□□□□ -1.02
YBX3-217ENST00000546164 ALMS1Q8TCU4 4167 aa8.65□□□□□ -1.03
YBX3-217ENST00000546164 TRAV8-2A0A0B4J237 113 aa8.64□□□□□ -1.03
YBX3-217ENST00000546164 UBE2L5PA0A1B0GUS4 154 aa8.64□□□□□ -1.03
YBX3-217ENST00000546164 ZNF705EA8MWA4 302 aaPredicted RBP8.64□□□□□ -1.03
YBX3-217ENST00000546164 COX7A2P2O60397 106 aa8.64□□□□□ -1.03
YBX3-217ENST00000546164 MPDU1O75352 247 aa8.64□□□□□ -1.03
YBX3-217ENST00000546164 MPC2O95563 127 aa8.64□□□□□ -1.03
YBX3-217ENST00000546164 OPCMLQ14982 345 aa8.64□□□□□ -1.03
YBX3-217ENST00000546164 LRRC37A5PQ49AS3 106 aa8.64□□□□□ -1.03
YBX3-217ENST00000546164 MIC13Q5XKP0 118 aa8.64□□□□□ -1.03
YBX3-217ENST00000546164 Q6ZRG5 221 aa8.64□□□□□ -1.03
YBX3-217ENST00000546164 LINC00305Q7Z4B0 112 aa8.64□□□□□ -1.03
YBX3-217ENST00000546164 C20orf173Q96LM9 149 aa8.64□□□□□ -1.03
YBX3-217ENST00000546164 RNF126Q9BV68 326 aa8.64□□□□□ -1.03
YBX3-217ENST00000546164 C1QTNF4Q9BXJ3 329 aa8.64□□□□□ -1.03
YBX3-217ENST00000546164 RPRMQ9NS64 109 aa8.64□□□□□ -1.03
YBX3-217ENST00000546164 A0A0J9YX75 114 aa8.63□□□□□ -1.03
YBX3-217ENST00000546164 A8MTW9 85 aa8.63□□□□□ -1.03
YBX3-217ENST00000546164 PET100P0DJ07 73 aa8.63□□□□□ -1.03
YBX3-217ENST00000546164 CXCL2P19875 107 aa8.63□□□□□ -1.03
YBX3-217ENST00000546164 DEFB1P60022 68 aa8.63□□□□□ -1.03
YBX3-217ENST00000546164 NHLH2Q02577 135 aa8.63□□□□□ -1.03
YBX3-217ENST00000546164 C10orf113Q5VZT2 155 aa8.63□□□□□ -1.03
YBX3-217ENST00000546164 OR5C1Q8NGR4 320 aa8.63□□□□□ -1.03
YBX3-217ENST00000546164 OR1L4Q8NGR5 311 aa8.63□□□□□ -1.03
YBX3-217ENST00000546164 PFDN5Q99471 154 aa8.63□□□□□ -1.03
YBX3-217ENST00000546164 DNAJC4Q9NNZ3 241 aa8.63□□□□□ -1.03
YBX3-217ENST00000546164 ALG5Q9Y673 324 aa8.63□□□□□ -1.03
YBX3-217ENST00000546164 FGF7P21781 194 aa8.62□□□□□ -1.03
YBX3-217ENST00000546164 B2MP61769 119 aa8.62□□□□□ -1.03
YBX3-217ENST00000546164 C4orf48Q5BLP8 95 aa8.62□□□□□ -1.03
YBX3-217ENST00000546164 EBLN2Q6P2I7 272 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms