RNA–Protein interactions for RNA: ENST00000545584.1

CHD4-213, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-213ENST00000545584 METTL15P1P0C7V9 234 aa14.28□□□□□ -0.12
CHD4-213ENST00000545584 RRAS2P62070 204 aaPredicted RBP14.28□□□□□ -0.12
CHD4-213ENST00000545584 DLK1P80370 383 aa14.28□□□□□ -0.12
CHD4-213ENST00000545584 FGL1Q08830 312 aa14.28□□□□□ -0.12
CHD4-213ENST00000545584 C20orf173Q96LM9 149 aa14.28□□□□□ -0.12
CHD4-213ENST00000545584 SCRT1Q9BWW7 348 aa14.28□□□□□ -0.12
CHD4-213ENST00000545584 SLC25A39Q9BZJ4 359 aaPredicted RBP14.28□□□□□ -0.12
CHD4-213ENST00000545584 NPVFQ9HCQ7 196 aa14.28□□□□□ -0.12
CHD4-213ENST00000545584 TEX48A0A1B0GUV7 120 aa14.27□□□□□ -0.13
CHD4-213ENST00000545584 FNDC10F2Z333 226 aa14.27□□□□□ -0.13
CHD4-213ENST00000545584 H3BRN7 92 aa14.27□□□□□ -0.13
CHD4-213ENST00000545584 TSC22D2O75157 780 aa14.27□□□□□ -0.13
CHD4-213ENST00000545584 HBE1P02100 147 aa14.27□□□□□ -0.13
CHD4-213ENST00000545584 OR5G3P0C626 314 aa14.27□□□□□ -0.13
CHD4-213ENST00000545584 LINC00869P0C866 280 aa14.27□□□□□ -0.13
CHD4-213ENST00000545584 RPL7P18124 248 aaKnown RBP14.27□□□□□ -0.13
CHD4-213ENST00000545584 TAS2R30P59541 319 aa14.27□□□□□ -0.13
CHD4-213ENST00000545584 PRR20EP86478 221 aa14.27□□□□□ -0.13
CHD4-213ENST00000545584 PRR20CP86479 221 aa14.27□□□□□ -0.13
CHD4-213ENST00000545584 PRR20DP86480 221 aa14.27□□□□□ -0.13
CHD4-213ENST00000545584 PRR20BP86481 221 aa14.27□□□□□ -0.13
CHD4-213ENST00000545584 PRR20AP86496 221 aa14.27□□□□□ -0.13
CHD4-213ENST00000545584 TMEM14EPQ6UXP3 125 aa14.27□□□□□ -0.13
CHD4-213ENST00000545584 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.27□□□□□ -0.13
CHD4-213ENST00000545584 ZBTB8BQ8NAP8 495 aaPredicted RBP14.27□□□□□ -0.13
CHD4-213ENST00000545584 MITD1Q8WV92 249 aa14.27□□□□□ -0.13
CHD4-213ENST00000545584 SHANK2-AS3Q9BTD1 123 aa14.27□□□□□ -0.13
CHD4-213ENST00000545584 NDUFA13Q9P0J0 144 aa14.27□□□□□ -0.13
CHD4-213ENST00000545584 DUSP14O95147 198 aaKnown RBP14.26□□□□□ -0.13
CHD4-213ENST00000545584 AMBPP02760 352 aa14.26□□□□□ -0.13
CHD4-213ENST00000545584 PLP1P60201 277 aa14.26□□□□□ -0.13
CHD4-213ENST00000545584 RNF24Q9Y225 148 aa14.26□□□□□ -0.13
CHD4-213ENST00000545584 CCNKO75909 580 aa14.25□□□□□ -0.13
CHD4-213ENST00000545584 ZNF846Q147U1 533 aa14.25□□□□□ -0.13
CHD4-213ENST00000545584 TEPPQ6URK8 271 aa14.25□□□□□ -0.13
CHD4-213ENST00000545584 TMEM208Q9BTX3 173 aa14.25□□□□□ -0.13
CHD4-213ENST00000545584 NDUFAF3Q9BU61 184 aa14.25□□□□□ -0.13
CHD4-213ENST00000545584 C20orf85Q9H1P6 137 aa14.25□□□□□ -0.13
CHD4-213ENST00000545584 LYRM1O43325 122 aa14.24□□□□□ -0.13
CHD4-213ENST00000545584 RRN3P1Q2M238 152 aa14.24□□□□□ -0.13
CHD4-213ENST00000545584 C17orf77Q96MU5 243 aa14.24□□□□□ -0.13
CHD4-213ENST00000545584 ARL6Q9H0F7 186 aa14.24□□□□□ -0.13
CHD4-213ENST00000545584 A8MTW9 85 aa14.23□□□□□ -0.13
CHD4-213ENST00000545584 L7N2F9 121 aa14.23□□□□□ -0.13
CHD4-213ENST00000545584 CNN1P51911 297 aaKnown RBP14.23□□□□□ -0.13
CHD4-213ENST00000545584 VAMP2P63027 116 aa14.23□□□□□ -0.13
CHD4-213ENST00000545584 IGFL4Q6B9Z1 124 aa14.23□□□□□ -0.13
CHD4-213ENST00000545584 C1orf158Q8N1D5 194 aa14.23□□□□□ -0.13
CHD4-213ENST00000545584 ZNF738Q8NE65 137 aa14.23□□□□□ -0.13
CHD4-213ENST00000545584 LRRC20Q8TCA0 184 aa14.23□□□□□ -0.13
CHD4-213ENST00000545584 IGF2BP2-AS1Q96M15 143 aa14.23□□□□□ -0.13
CHD4-213ENST00000545584 NIPSNAP3BQ9BS92 247 aa14.23□□□□□ -0.13
CHD4-213ENST00000545584 DKK2Q9UBU2 259 aa14.23□□□□□ -0.13
CHD4-213ENST00000545584 RCL1Q9Y2P8 373 aaKnown RBP14.23□□□□□ -0.13
CHD4-213ENST00000545584 KMT2AQ03164 3969 aa14.22□□□□□ -0.13
CHD4-213ENST00000545584 TRAV8-2A0A0B4J237 113 aa14.22□□□□□ -0.13
CHD4-213ENST00000545584 LOC102723971A0A1B0GUV8 181 aa14.22□□□□□ -0.13
CHD4-213ENST00000545584 K7EPK0 472 aa14.22□□□□□ -0.13
CHD4-213ENST00000545584 GOSR2O14653 212 aa14.22□□□□□ -0.13
CHD4-213ENST00000545584 PLA2G10O15496 165 aa14.22□□□□□ -0.13
CHD4-213ENST00000545584 MBPP02686 304 aaPredicted RBP14.22□□□□□ -0.13
CHD4-213ENST00000545584 P0DMU3 169 aa14.22□□□□□ -0.13
CHD4-213ENST00000545584 FAM231AP0DMU4 169 aa14.22□□□□□ -0.13
CHD4-213ENST00000545584 FAM231CP0DMU5 169 aa14.22□□□□□ -0.13
CHD4-213ENST00000545584 SLC38A11Q08AI6 406 aa14.22□□□□□ -0.13
CHD4-213ENST00000545584 PXDC1Q5TGL8 231 aa14.22□□□□□ -0.13
CHD4-213ENST00000545584 FAM222AQ5U5X8 452 aa14.22□□□□□ -0.13
CHD4-213ENST00000545584 ZNF546Q86UE3 836 aa14.22□□□□□ -0.13
CHD4-213ENST00000545584 RNF182Q8N6D2 247 aa14.22□□□□□ -0.13
CHD4-213ENST00000545584 UHRF2Q96PU4 802 aa14.22□□□□□ -0.13
CHD4-213ENST00000545584 GGACTQ9BVM4 153 aa14.22□□□□□ -0.13
CHD4-213ENST00000545584 TRAV6A0A075B6T7 132 aa14.21□□□□□ -0.13
CHD4-213ENST00000545584 C7orf66A4D0T2 115 aa14.21□□□□□ -0.13
CHD4-213ENST00000545584 FAM25EA8MYX2 175 aa14.21□□□□□ -0.13
CHD4-213ENST00000545584 TCRBP04435 133 aa14.21□□□□□ -0.13
CHD4-213ENST00000545584 AMTNQ6UX39 209 aa14.21□□□□□ -0.13
CHD4-213ENST00000545584 OR11H7Q8NGC8 314 aa14.21□□□□□ -0.13
CHD4-213ENST00000545584 ARV1Q9H2C2 271 aa14.21□□□□□ -0.13
CHD4-213ENST00000545584 YTHDF2Q9Y5A9 579 aaKnown RBP14.21□□□□□ -0.13
CHD4-213ENST00000545584 CCSO14618 274 aa14.2□□□□□ -0.14
CHD4-213ENST00000545584 INSP01308 110 aa14.2□□□□□ -0.14
CHD4-213ENST00000545584 BCAP31P51572 246 aa14.2□□□□□ -0.14
CHD4-213ENST00000545584 SPINK13Q1W4C9 94 aa14.2□□□□□ -0.14
CHD4-213ENST00000545584 PPP1R14DQ9NXH3 145 aa14.2□□□□□ -0.14
CHD4-213ENST00000545584 LSM5Q9Y4Y9 91 aaKnown RBP14.2□□□□□ -0.14
CHD4-213ENST00000545584 A0A087X0K7 114 aa14.19□□□□□ -0.14
CHD4-213ENST00000545584 C5orf51A6NDU8 294 aa14.19□□□□□ -0.14
CHD4-213ENST00000545584 AGPAT2O15120 278 aa14.19□□□□□ -0.14
CHD4-213ENST00000545584 B2MP61769 119 aa14.19□□□□□ -0.14
CHD4-213ENST00000545584 OXA1LQ15070 435 aa14.19□□□□□ -0.14
CHD4-213ENST00000545584 ZNF431Q8TF32 576 aaPredicted RBP14.19□□□□□ -0.14
CHD4-213ENST00000545584 FAM210BQ96KR6 192 aa14.19□□□□□ -0.14
CHD4-213ENST00000545584 NUDT15Q9NV35 164 aa14.19□□□□□ -0.14
CHD4-213ENST00000545584 M0R2Z0 102 aa14.18□□□□□ -0.14
CHD4-213ENST00000545584 CXCL3P19876 107 aa14.18□□□□□ -0.14
CHD4-213ENST00000545584 RHOBP62745 196 aa14.18□□□□□ -0.14
CHD4-213ENST00000545584 HIST1H1AQ02539 215 aaPredicted RBP14.18□□□□□ -0.14
CHD4-213ENST00000545584 ARL16Q0P5N6 197 aa14.18□□□□□ -0.14
CHD4-213ENST00000545584 RAB31Q13636 194 aa14.18□□□□□ -0.14
CHD4-213ENST00000545584 PSG3Q16557 428 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 158.1 ms