RNA–Protein interactions for RNA: ENST00000545153.5

PTPN6-223, Transcript of protein tyrosine phosphatase, non-receptor type 6, human

TSL 3

Gene PTPN6, Length 959 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN6-223	ENST00000545153	S100A7A	Q86SG5	101 aa		10.53	□□□□□ -0.72
PTPN6-223	ENST00000545153	TRPT1	Q86TN4	253 aa	Known RBP	10.53	□□□□□ -0.72
PTPN6-223	ENST00000545153	TMEM37	Q8WXS4	190 aa		10.53	□□□□□ -0.72
PTPN6-223	ENST00000545153	RNF183	Q96D59	192 aa		10.53	□□□□□ -0.72
PTPN6-223	ENST00000545153	C16orf92	Q96LL3	132 aa		10.53	□□□□□ -0.72
PTPN6-223	ENST00000545153	GPR82	Q96P67	336 aa		10.53	□□□□□ -0.72
PTPN6-223	ENST00000545153	TP53TG1	Q9Y2A0	90 aa		10.53	□□□□□ -0.72
PTPN6-223	ENST00000545153	DNAH7	Q8WXX0	4024 aa		10.52	□□□□□ -0.72
PTPN6-223	ENST00000545153	COX7A2P2	O60397	106 aa		10.52	□□□□□ -0.73
PTPN6-223	ENST00000545153	FGF7	P21781	194 aa		10.52	□□□□□ -0.73
PTPN6-223	ENST00000545153	DEFB1	P60022	68 aa		10.52	□□□□□ -0.73
PTPN6-223	ENST00000545153	PRR20E	P86478	221 aa		10.52	□□□□□ -0.73
PTPN6-223	ENST00000545153	PRR20C	P86479	221 aa		10.52	□□□□□ -0.73
PTPN6-223	ENST00000545153	PRR20D	P86480	221 aa		10.52	□□□□□ -0.73
PTPN6-223	ENST00000545153	PRR20B	P86481	221 aa		10.52	□□□□□ -0.73
PTPN6-223	ENST00000545153	PRR20A	P86496	221 aa		10.52	□□□□□ -0.73
PTPN6-223	ENST00000545153	FGL1	Q08830	312 aa		10.52	□□□□□ -0.73
PTPN6-223	ENST00000545153	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		10.52	□□□□□ -0.73
PTPN6-223	ENST00000545153		Q6ZRG5	221 aa		10.52	□□□□□ -0.73
PTPN6-223	ENST00000545153	LINC00305	Q7Z4B0	112 aa		10.52	□□□□□ -0.73
PTPN6-223	ENST00000545153	OR11H7	Q8NGC8	314 aa		10.52	□□□□□ -0.73
PTPN6-223	ENST00000545153	DNAJC4	Q9NNZ3	241 aa		10.52	□□□□□ -0.73
PTPN6-223	ENST00000545153	ELOA3C	A0A087WX78	387 aa	Predicted RBP	10.51	□□□□□ -0.73
PTPN6-223	ENST00000545153	CA1	P00915	261 aa	Predicted RBP	10.51	□□□□□ -0.73
PTPN6-223	ENST00000545153	PET100	P0DJ07	73 aa		10.51	□□□□□ -0.73
PTPN6-223	ENST00000545153	RPL7	P18124	248 aa	Known RBP	10.51	□□□□□ -0.73
PTPN6-223	ENST00000545153	RPL29	P47914	159 aa	Known RBP	10.51	□□□□□ -0.73
PTPN6-223	ENST00000545153	PSMB3	P49720	205 aa		10.51	□□□□□ -0.73
PTPN6-223	ENST00000545153	MEOX2	P50222	304 aa		10.51	□□□□□ -0.73
PTPN6-223	ENST00000545153	CLINT1	Q14677	625 aa		10.51	□□□□□ -0.73
PTPN6-223	ENST00000545153	C10orf113	Q5VZT2	155 aa		10.51	□□□□□ -0.73
PTPN6-223	ENST00000545153	MUC7	Q8TAX7	377 aa		10.51	□□□□□ -0.73
PTPN6-223	ENST00000545153	THAP6	Q8TBB0	222 aa		10.51	□□□□□ -0.73
PTPN6-223	ENST00000545153	MBD2	Q9UBB5	411 aa		10.51	□□□□□ -0.73
PTPN6-223	ENST00000545153		H3BMM0	161 aa		10.5	□□□□□ -0.73
PTPN6-223	ENST00000545153	C3orf84	H3BNL1	204 aa		10.5	□□□□□ -0.73
PTPN6-223	ENST00000545153	ISLR	O14498	428 aa		10.5	□□□□□ -0.73
PTPN6-223	ENST00000545153	ATF4	P18848	351 aa	Predicted RBP	10.5	□□□□□ -0.73
PTPN6-223	ENST00000545153	RPL12	P30050	165 aa	Known RBP	10.5	□□□□□ -0.73
PTPN6-223	ENST00000545153	OPCML	Q14982	345 aa		10.5	□□□□□ -0.73
PTPN6-223	ENST00000545153	GDF5OS	Q5U4N7	250 aa		10.5	□□□□□ -0.73
PTPN6-223	ENST00000545153	SAMD13	Q5VXD3	122 aa		10.5	□□□□□ -0.73
PTPN6-223	ENST00000545153	IGFL4	Q6B9Z1	124 aa		10.5	□□□□□ -0.73
PTPN6-223	ENST00000545153	MORN3	Q6PF18	240 aa	Predicted RBP	10.5	□□□□□ -0.73
PTPN6-223	ENST00000545153	OR1L4	Q8NGR5	311 aa		10.5	□□□□□ -0.73
PTPN6-223	ENST00000545153	CHAC2	Q8WUX2	184 aa		10.5	□□□□□ -0.73
PTPN6-223	ENST00000545153	C20orf173	Q96LM9	149 aa		10.5	□□□□□ -0.73
PTPN6-223	ENST00000545153	SLC39A9	Q9NUM3	307 aa		10.5	□□□□□ -0.73
PTPN6-223	ENST00000545153	PXMP4	Q9Y6I8	212 aa		10.5	□□□□□ -0.73
PTPN6-223	ENST00000545153	TRAV8-2	A0A0B4J237	113 aa		10.49	□□□□□ -0.73
PTPN6-223	ENST00000545153	TRAV5	A0A0B4J249	113 aa		10.49	□□□□□ -0.73
PTPN6-223	ENST00000545153	MPDU1	O75352	247 aa		10.49	□□□□□ -0.73
PTPN6-223	ENST00000545153	IGKV3-20	P01619	116 aa		10.49	□□□□□ -0.73
PTPN6-223	ENST00000545153	SNRPC	P09234	159 aa	Known RBP	10.49	□□□□□ -0.73
PTPN6-223	ENST00000545153	GIG44	P09565	113 aa	Predicted RBP	10.49	□□□□□ -0.73
PTPN6-223	ENST00000545153	SPP1	P10451	314 aa		10.49	□□□□□ -0.73
PTPN6-223	ENST00000545153	LYL1	P12980	280 aa		10.49	□□□□□ -0.73
PTPN6-223	ENST00000545153	B2M	P61769	119 aa		10.49	□□□□□ -0.73
PTPN6-223	ENST00000545153	OXA1L	Q15070	435 aa		10.49	□□□□□ -0.73
PTPN6-223	ENST00000545153	MORN5	Q5VZ52	161 aa		10.49	□□□□□ -0.73
PTPN6-223	ENST00000545153	NPCDR1	Q9BY65	106 aa		10.49	□□□□□ -0.73
PTPN6-223	ENST00000545153	SAV1	Q9H4B6	383 aa	Predicted RBP	10.49	□□□□□ -0.73
PTPN6-223	ENST00000545153	RNF24	Q9Y225	148 aa		10.49	□□□□□ -0.73
PTPN6-223	ENST00000545153	HSPB11	Q9Y547	144 aa		10.49	□□□□□ -0.73
PTPN6-223	ENST00000545153		F6UB75	175 aa		10.48	□□□□□ -0.73
PTPN6-223	ENST00000545153	MRPS12	O15235	138 aa	Known RBP	10.48	□□□□□ -0.73
PTPN6-223	ENST00000545153	HLA-DRB4	P13762	266 aa		10.48	□□□□□ -0.73
PTPN6-223	ENST00000545153	FOXI2	Q6ZQN5	318 aa		10.48	□□□□□ -0.73
PTPN6-223	ENST00000545153	LRRC20	Q8TCA0	184 aa		10.48	□□□□□ -0.73
PTPN6-223	ENST00000545153	GATAD1	Q8WUU5	269 aa		10.48	□□□□□ -0.73
PTPN6-223	ENST00000545153	RARRES2	Q99969	163 aa		10.48	□□□□□ -0.73
PTPN6-223	ENST00000545153	SMIM3	Q9BZL3	60 aa		10.48	□□□□□ -0.73
PTPN6-223	ENST00000545153	WDR61	Q9GZS3	305 aa	Known RBP	10.48	□□□□□ -0.73
PTPN6-223	ENST00000545153	RPRM	Q9NS64	109 aa		10.48	□□□□□ -0.73
PTPN6-223	ENST00000545153	HLA-DRB4	X5D2U9	266 aa		10.48	□□□□□ -0.73
PTPN6-223	ENST00000545153		A0A0J9YWU9	116 aa		10.47	□□□□□ -0.73
PTPN6-223	ENST00000545153	C4BPB	P20851	252 aa		10.47	□□□□□ -0.73
PTPN6-223	ENST00000545153	ZFAND6	Q6FIF0	208 aa		10.47	□□□□□ -0.73
PTPN6-223	ENST00000545153	EBLN2	Q6P2I7	272 aa		10.47	□□□□□ -0.73
PTPN6-223	ENST00000545153	BPIFA4P	Q86YQ2	179 aa		10.47	□□□□□ -0.73
PTPN6-223	ENST00000545153	RNF182	Q8N6D2	247 aa		10.47	□□□□□ -0.73
PTPN6-223	ENST00000545153	ZNF709	Q8N972	641 aa		10.47	□□□□□ -0.73
PTPN6-223	ENST00000545153	OR4B1	Q8NGF8	309 aa		10.47	□□□□□ -0.73
PTPN6-223	ENST00000545153	OR11H2	Q8NH07	326 aa		10.47	□□□□□ -0.73
PTPN6-223	ENST00000545153	PFDN5	Q99471	154 aa		10.47	□□□□□ -0.73
PTPN6-223	ENST00000545153	ATP5S	Q99766	215 aa		10.47	□□□□□ -0.73
PTPN6-223	ENST00000545153	CLEC5A	Q9NY25	188 aa		10.47	□□□□□ -0.73
PTPN6-223	ENST00000545153		A0A087X0K7	114 aa		10.46	□□□□□ -0.73
PTPN6-223	ENST00000545153	HLA-DMB	P28068	263 aa		10.46	□□□□□ -0.73
PTPN6-223	ENST00000545153	NUTF2	P61970	127 aa	Known RBP	10.46	□□□□□ -0.73
PTPN6-223	ENST00000545153	TMEM41B	Q5BJD5	291 aa		10.46	□□□□□ -0.73
PTPN6-223	ENST00000545153		Q5BKY6	102 aa		10.46	□□□□□ -0.73
PTPN6-223	ENST00000545153	GCSAML	Q5JQS6	135 aa		10.46	□□□□□ -0.73
PTPN6-223	ENST00000545153	WFDC1	Q9HC57	220 aa		10.46	□□□□□ -0.73
PTPN6-223	ENST00000545153	KMT2C	Q8NEZ4	4911 aa	Known RBP	10.45	□□□□□ -0.74
PTPN6-223	ENST00000545153		A0A0J9YX75	114 aa		10.45	□□□□□ -0.74
PTPN6-223	ENST00000545153		H3BTX0	84 aa		10.45	□□□□□ -0.74
PTPN6-223	ENST00000545153	IFNA5	P01569	189 aa		10.45	□□□□□ -0.74
PTPN6-223	ENST00000545153	GIP	P09681	153 aa	Predicted RBP	10.45	□□□□□ -0.74
PTPN6-223	ENST00000545153	FXYD7	P58549	80 aa		10.45	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms