RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 GNPNAT1Q96EK6 184 aaPredicted RBP10.87□□□□□ -0.67
TNFRSF1A-216ENST00000543995 GPR82Q96P67 336 aa10.87□□□□□ -0.67
TNFRSF1A-216ENST00000543995 SLC25A32Q9H2D1 315 aa10.87□□□□□ -0.67
TNFRSF1A-216ENST00000543995 MS4A6AQ9H2W1 248 aa10.87□□□□□ -0.67
TNFRSF1A-216ENST00000543995 AURKAIP1Q9NWT8 199 aaPredicted RBP10.87□□□□□ -0.67
TNFRSF1A-216ENST00000543995 MGAM2Q2M2H8 2515 aa10.87□□□□□ -0.67
TNFRSF1A-216ENST00000543995 BCL2L11O43521 198 aa10.86□□□□□ -0.67
TNFRSF1A-216ENST00000543995 GALR1P47211 349 aa10.86□□□□□ -0.67
TNFRSF1A-216ENST00000543995 NKX2-5P52952 324 aaPredicted RBP10.86□□□□□ -0.67
TNFRSF1A-216ENST00000543995 CD81P60033 236 aa10.86□□□□□ -0.67
TNFRSF1A-216ENST00000543995 LGALSLQ3ZCW2 172 aaPredicted RBP10.86□□□□□ -0.67
TNFRSF1A-216ENST00000543995 FAM78BQ5VT40 261 aa10.86□□□□□ -0.67
TNFRSF1A-216ENST00000543995 ZNF471Q9BX82 626 aaPredicted RBP10.86□□□□□ -0.67
TNFRSF1A-216ENST00000543995 CYTL1Q9NRR1 136 aa10.86□□□□□ -0.67
TNFRSF1A-216ENST00000543995 BOLA2-SMG1P6H3BVE0 249 aa10.85□□□□□ -0.67
TNFRSF1A-216ENST00000543995 RPL7P18124 248 aaKnown RBP10.85□□□□□ -0.67
TNFRSF1A-216ENST00000543995 ACOT6Q3I5F7 207 aaPredicted RBP10.85□□□□□ -0.67
TNFRSF1A-216ENST00000543995 PSMG3Q9BT73 122 aaPredicted RBP10.85□□□□□ -0.67
TNFRSF1A-216ENST00000543995 SH3BGRL3Q9H299 93 aa10.85□□□□□ -0.67
TNFRSF1A-216ENST00000543995 ATF4P18848 351 aaPredicted RBP10.84□□□□□ -0.67
TNFRSF1A-216ENST00000543995 DEFA6Q01524 100 aa10.84□□□□□ -0.67
TNFRSF1A-216ENST00000543995 MORN5Q5VZ52 161 aa10.84□□□□□ -0.67
TNFRSF1A-216ENST00000543995 OR2G3Q8NGZ4 309 aa10.84□□□□□ -0.67
TNFRSF1A-216ENST00000543995 SEPSECSQ9HD40 501 aaKnown RBP10.84□□□□□ -0.67
TNFRSF1A-216ENST00000543995 NRN1Q9NPD7 142 aa10.84□□□□□ -0.67
TNFRSF1A-216ENST00000543995 TRAV5A0A0B4J249 113 aa10.84□□□□□ -0.67
TNFRSF1A-216ENST00000543995 CD7P09564 240 aa10.84□□□□□ -0.67
TNFRSF1A-216ENST00000543995 M6PRP20645 277 aa10.84□□□□□ -0.67
TNFRSF1A-216ENST00000543995 SERF2P84101 59 aa10.84□□□□□ -0.67
TNFRSF1A-216ENST00000543995 BPIFA4PQ86YQ2 179 aa10.84□□□□□ -0.67
TNFRSF1A-216ENST00000543995 MRPL32Q9BYC8 188 aaKnown RBP10.84□□□□□ -0.67
TNFRSF1A-216ENST00000543995 UBQLN2Q9UHD9 624 aa10.84□□□□□ -0.67
TNFRSF1A-216ENST00000543995 TRAV2A0A0B4J234 112 aa10.83□□□□□ -0.68
TNFRSF1A-216ENST00000543995 RAB2AP61019 212 aa10.83□□□□□ -0.68
TNFRSF1A-216ENST00000543995 RHOBP62745 196 aa10.83□□□□□ -0.68
TNFRSF1A-216ENST00000543995 EIF5AP63241 154 aaKnown RBP10.83□□□□□ -0.68
TNFRSF1A-216ENST00000543995 MIR17HGQ75NE6 70 aa10.83□□□□□ -0.68
TNFRSF1A-216ENST00000543995 OR10G4Q8NGN3 311 aa10.83□□□□□ -0.68
TNFRSF1A-216ENST00000543995 OR10G9Q8NGN4 311 aa10.83□□□□□ -0.68
TNFRSF1A-216ENST00000543995 OR10G7Q8NGN6 311 aa10.83□□□□□ -0.68
TNFRSF1A-216ENST00000543995 DCANP1Q8TF63 244 aa10.83□□□□□ -0.68
TNFRSF1A-216ENST00000543995 FUT9Q9Y231 359 aa10.83□□□□□ -0.68
TNFRSF1A-216ENST00000543995 A0A1W2PPV4 95 aa10.82□□□□□ -0.68
TNFRSF1A-216ENST00000543995 K7EQG2 157 aa10.82□□□□□ -0.68
TNFRSF1A-216ENST00000543995 MBP02144 154 aa10.82□□□□□ -0.68
TNFRSF1A-216ENST00000543995 TPT1P13693 172 aaKnown RBP10.82□□□□□ -0.68
TNFRSF1A-216ENST00000543995 C4BPBP20851 252 aa10.82□□□□□ -0.68
TNFRSF1A-216ENST00000543995 DEFB121Q5J5C9 76 aa10.82□□□□□ -0.68
TNFRSF1A-216ENST00000543995 SPATA31B1PQ5VZV4 182 aa10.82□□□□□ -0.68
TNFRSF1A-216ENST00000543995 FAM122CQ6P4D5 195 aa10.82□□□□□ -0.68
TNFRSF1A-216ENST00000543995 C9orf62Q8N4C0 152 aa10.82□□□□□ -0.68
TNFRSF1A-216ENST00000543995 SMAD5-AS1Q9Y6J3 95 aa10.82□□□□□ -0.68
TNFRSF1A-216ENST00000543995 K7EIL1 84 aa10.81□□□□□ -0.68
TNFRSF1A-216ENST00000543995 SPP1P10451 314 aa10.81□□□□□ -0.68
TNFRSF1A-216ENST00000543995 MEOX2P50222 304 aa10.81□□□□□ -0.68
TNFRSF1A-216ENST00000543995 CMC4P56277 68 aaPredicted RBP10.81□□□□□ -0.68
TNFRSF1A-216ENST00000543995 AKR1C8PQ5T2L2 129 aa10.81□□□□□ -0.68
TNFRSF1A-216ENST00000543995 Q8N1Y9 231 aa10.81□□□□□ -0.68
TNFRSF1A-216ENST00000543995 FAM24BQ8N5W8 94 aa10.81□□□□□ -0.68
TNFRSF1A-216ENST00000543995 MRAPQ8TCY5 172 aa10.81□□□□□ -0.68
TNFRSF1A-216ENST00000543995 OR11H12B2RN74 326 aa10.8□□□□□ -0.68
TNFRSF1A-216ENST00000543995 SNRPCP09234 159 aaKnown RBP10.8□□□□□ -0.68
TNFRSF1A-216ENST00000543995 ZNF688P0C7X2 276 aa10.8□□□□□ -0.68
TNFRSF1A-216ENST00000543995 ID1P41134 155 aa10.8□□□□□ -0.68
TNFRSF1A-216ENST00000543995 TAS2R45P59539 299 aa10.8□□□□□ -0.68
TNFRSF1A-216ENST00000543995 SNRPD3P62318 126 aaKnown RBP10.8□□□□□ -0.68
TNFRSF1A-216ENST00000543995 TMEM41BQ5BJD5 291 aa10.8□□□□□ -0.68
TNFRSF1A-216ENST00000543995 LRRC20Q8TCA0 184 aa10.8□□□□□ -0.68
TNFRSF1A-216ENST00000543995 C16orf92Q96LL3 132 aa10.8□□□□□ -0.68
TNFRSF1A-216ENST00000543995 SLC25A2Q9BXI2 301 aa10.8□□□□□ -0.68
TNFRSF1A-216ENST00000543995 WFDC10AQ9H1F0 79 aa10.8□□□□□ -0.68
TNFRSF1A-216ENST00000543995 MAP6D1Q9H9H5 199 aa10.8□□□□□ -0.68
TNFRSF1A-216ENST00000543995 MRPS12O15235 138 aaKnown RBP10.79□□□□□ -0.68
TNFRSF1A-216ENST00000543995 OR7C2O60412 319 aa10.79□□□□□ -0.68
TNFRSF1A-216ENST00000543995 CDC34P49427 236 aaPredicted RBP10.79□□□□□ -0.68
TNFRSF1A-216ENST00000543995 ODF3L2Q3SX64 289 aa10.79□□□□□ -0.68
TNFRSF1A-216ENST00000543995 KHDC3LQ587J8 217 aa10.79□□□□□ -0.68
TNFRSF1A-216ENST00000543995 SAMD13Q5VXD3 122 aa10.79□□□□□ -0.68
TNFRSF1A-216ENST00000543995 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.79□□□□□ -0.68
TNFRSF1A-216ENST00000543995 BAP18Q8IXM2 172 aa10.79□□□□□ -0.68
TNFRSF1A-216ENST00000543995 LINC00052Q96N35 136 aa10.79□□□□□ -0.68
TNFRSF1A-216ENST00000543995 BOLA1Q9Y3E2 137 aa10.79□□□□□ -0.68
TNFRSF1A-216ENST00000543995 DNAH3Q8TD57 4116 aa10.79□□□□□ -0.68
TNFRSF1A-216ENST00000543995 A0A087X0K7 114 aa10.79□□□□□ -0.68
TNFRSF1A-216ENST00000543995 EIF3GO75821 320 aaKnown RBP eCLIP10.79□□□□□ -0.68
TNFRSF1A-216ENST00000543995 SEC11BP0C7V7 166 aa10.79□□□□□ -0.68
TNFRSF1A-216ENST00000543995 PYYP10082 97 aa10.79□□□□□ -0.68
TNFRSF1A-216ENST00000543995 DEFB131AP59861 70 aa10.79□□□□□ -0.68
TNFRSF1A-216ENST00000543995 PSMG4Q5JS54 123 aa10.79□□□□□ -0.68
TNFRSF1A-216ENST00000543995 SLC51BQ86UW2 128 aa10.79□□□□□ -0.68
TNFRSF1A-216ENST00000543995 APRG1Q8IVJ8 170 aa10.79□□□□□ -0.68
TNFRSF1A-216ENST00000543995 RPP25LQ8N5L8 163 aaKnown RBP10.79□□□□□ -0.68
TNFRSF1A-216ENST00000543995 DEFB125Q8N687 156 aa10.79□□□□□ -0.68
TNFRSF1A-216ENST00000543995 STOML3Q8TAV4 291 aa10.79□□□□□ -0.68
TNFRSF1A-216ENST00000543995 FAM167A-AS1Q96KT0 104 aa10.79□□□□□ -0.68
TNFRSF1A-216ENST00000543995 ACTR3CQ9C0K3 210 aaPredicted RBP10.79□□□□□ -0.68
TNFRSF1A-216ENST00000543995 OR51M1Q9H341 326 aa10.79□□□□□ -0.68
TNFRSF1A-216ENST00000543995 HRH4Q9H3N8 390 aa10.79□□□□□ -0.68
TNFRSF1A-216ENST00000543995 TUBA4BQ9H853 241 aa10.79□□□□□ -0.68
TNFRSF1A-216ENST00000543995 RPRMQ9NS64 109 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms