RNA–Protein interactions for RNA: ENST00000543660.1

NPIPB4-219, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 353 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-219ENST00000543660 KRTAP29-1A8MX34 341 aaPredicted RBP3.4□□□□□ -1.87
NPIPB4-219ENST00000543660 TCRBP04435 133 aa3.4□□□□□ -1.87
NPIPB4-219ENST00000543660 GNAO1P09471 354 aa3.4□□□□□ -1.87
NPIPB4-219ENST00000543660 CD36P16671 472 aa3.4□□□□□ -1.87
NPIPB4-219ENST00000543660 ZBTB25P24278 435 aa3.4□□□□□ -1.87
NPIPB4-219ENST00000543660 NPY1RP25929 384 aa3.4□□□□□ -1.87
NPIPB4-219ENST00000543660 SNRPGP62308 76 aaKnown RBP3.4□□□□□ -1.87
NPIPB4-219ENST00000543660 VMA21Q3ZAQ7 101 aa3.4□□□□□ -1.87
NPIPB4-219ENST00000543660 HACD4Q5VWC8 232 aa3.4□□□□□ -1.87
NPIPB4-219ENST00000543660 TRIQKQ629K1 86 aa3.4□□□□□ -1.87
NPIPB4-219ENST00000543660 PLET1Q6UQ28 207 aa3.4□□□□□ -1.87
NPIPB4-219ENST00000543660 ACBD7Q8N6N7 88 aa3.4□□□□□ -1.87
NPIPB4-219ENST00000543660 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.4□□□□□ -1.87
NPIPB4-219ENST00000543660 CSNK1G2-AS1Q8NCQ2 148 aa3.4□□□□□ -1.87
NPIPB4-219ENST00000543660 ZNRF2Q8NHG8 242 aa3.4□□□□□ -1.87
NPIPB4-219ENST00000543660 ZFAND1Q8TCF1 268 aa3.4□□□□□ -1.87
NPIPB4-219ENST00000543660 CANT1Q8WVQ1 401 aa3.4□□□□□ -1.87
NPIPB4-219ENST00000543660 TMEM230Q96A57 120 aa3.4□□□□□ -1.87
NPIPB4-219ENST00000543660 FAAP24Q9BTP7 215 aa3.4□□□□□ -1.87
NPIPB4-219ENST00000543660 YTHDF1Q9BYJ9 559 aaKnown RBP3.4□□□□□ -1.87
NPIPB4-219ENST00000543660 RNF167Q9H6Y7 350 aa3.4□□□□□ -1.87
NPIPB4-219ENST00000543660 KLF12Q9Y4X4 402 aa3.4□□□□□ -1.87
NPIPB4-219ENST00000543660 OR51B2Q9Y5P1 312 aa3.4□□□□□ -1.87
NPIPB4-219ENST00000543660 IGKV3-7A0A075B6H7 116 aa3.39□□□□□ -1.87
NPIPB4-219ENST00000543660 IGHV3OR16-12A0A075B7B8 117 aa3.39□□□□□ -1.87
NPIPB4-219ENST00000543660 IGHV3OR16-8A0A075B7F1 116 aa3.39□□□□□ -1.87
NPIPB4-219ENST00000543660 TRBV6-6A0A0A6YYG2 114 aa3.39□□□□□ -1.87
NPIPB4-219ENST00000543660 IGKV1-6A0A0C4DH72 117 aa3.39□□□□□ -1.87
NPIPB4-219ENST00000543660 ANKRD65E5RJM6 399 aa3.39□□□□□ -1.87
NPIPB4-219ENST00000543660 F5H768 121 aa3.39□□□□□ -1.87
NPIPB4-219ENST00000543660 K7EMT4 169 aa3.39□□□□□ -1.87
NPIPB4-219ENST00000543660 K7EQD1 137 aa3.39□□□□□ -1.87
NPIPB4-219ENST00000543660 NDUFA4O00483 81 aa3.39□□□□□ -1.87
NPIPB4-219ENST00000543660 TCAPO15273 167 aa3.39□□□□□ -1.87
NPIPB4-219ENST00000543660 ZNF207O43670 478 aaKnown RBP3.39□□□□□ -1.87
NPIPB4-219ENST00000543660 CRYZL1O95825 349 aa3.39□□□□□ -1.87
NPIPB4-219ENST00000543660 NUDT3O95989 172 aa3.39□□□□□ -1.87
NPIPB4-219ENST00000543660 TSHBP01222 138 aa3.39□□□□□ -1.87
NPIPB4-219ENST00000543660 SMR3BP02814 79 aaPredicted RBP3.39□□□□□ -1.87
NPIPB4-219ENST00000543660 CD2P06729 351 aa3.39□□□□□ -1.87
NPIPB4-219ENST00000543660 SAA1P0DJI8 122 aaPredicted RBP3.39□□□□□ -1.87
NPIPB4-219ENST00000543660 PSMB9P28065 219 aa3.39□□□□□ -1.87
NPIPB4-219ENST00000543660 POLR2IP36954 125 aaKnown RBP3.39□□□□□ -1.87
NPIPB4-219ENST00000543660 PPP3R1P63098 170 aa3.39□□□□□ -1.87
NPIPB4-219ENST00000543660 CDK10Q15131 360 aa3.39□□□□□ -1.87
NPIPB4-219ENST00000543660 RTL8BQ17RB0 113 aa3.39□□□□□ -1.87
NPIPB4-219ENST00000543660 IZUMO4Q1ZYL8 232 aa3.39□□□□□ -1.87
NPIPB4-219ENST00000543660 LEMD1Q68G75 181 aa3.39□□□□□ -1.87
NPIPB4-219ENST00000543660 KDM4DQ6B0I6 523 aa3.39□□□□□ -1.87
NPIPB4-219ENST00000543660 C6orf201Q7Z4U5 140 aa3.39□□□□□ -1.87
NPIPB4-219ENST00000543660 MRPL55Q7Z7F7 128 aaKnown RBP3.39□□□□□ -1.87
NPIPB4-219ENST00000543660 CBR4Q8N4T8 237 aa3.39□□□□□ -1.87
NPIPB4-219ENST00000543660 OR10R2Q8NGX6 335 aa3.39□□□□□ -1.87
NPIPB4-219ENST00000543660 SMIM12Q96EX1 92 aa3.39□□□□□ -1.87
NPIPB4-219ENST00000543660 ZNF414Q96IQ9 312 aa3.39□□□□□ -1.87
NPIPB4-219ENST00000543660 TMEM56Q96MV1 263 aa3.39□□□□□ -1.87
NPIPB4-219ENST00000543660 Q9UF83 564 aa3.39□□□□□ -1.87
NPIPB4-219ENST00000543660 SMPXQ9UHP9 88 aa3.39□□□□□ -1.87
NPIPB4-219ENST00000543660 OR2T8A6NH00 312 aa3.38□□□□□ -1.87
NPIPB4-219ENST00000543660 F6UB75 175 aa3.38□□□□□ -1.87
NPIPB4-219ENST00000543660 NUPL2O15504 423 aaKnown RBP3.38□□□□□ -1.87
NPIPB4-219ENST00000543660 CREBL2O60519 120 aaPredicted RBP3.38□□□□□ -1.87
NPIPB4-219ENST00000543660 UPK1BO75841 260 aa3.38□□□□□ -1.87
NPIPB4-219ENST00000543660 DHFRP00374 187 aa3.38□□□□□ -1.87
NPIPB4-219ENST00000543660 TYMSP04818 313 aa3.38□□□□□ -1.87
NPIPB4-219ENST00000543660 REG1AP05451 166 aa3.38□□□□□ -1.87
NPIPB4-219ENST00000543660 HIST1H1BP16401 226 aaKnown RBP3.38□□□□□ -1.87
NPIPB4-219ENST00000543660 MYL9P24844 172 aa3.38□□□□□ -1.87
NPIPB4-219ENST00000543660 F2RP25116 425 aa3.38□□□□□ -1.87
NPIPB4-219ENST00000543660 RPL29P47914 159 aaKnown RBP3.38□□□□□ -1.87
NPIPB4-219ENST00000543660 RORCP51449 518 aa3.38□□□□□ -1.87
NPIPB4-219ENST00000543660 DEFB131AP59861 70 aa3.38□□□□□ -1.87
NPIPB4-219ENST00000543660 SRPXP78539 464 aa3.38□□□□□ -1.87
NPIPB4-219ENST00000543660 HLA-DRB3P79483 266 aa3.38□□□□□ -1.87
NPIPB4-219ENST00000543660 RPL19P84098 196 aaKnown RBP3.38□□□□□ -1.87
NPIPB4-219ENST00000543660 RPL18AQ02543 176 aaKnown RBP3.38□□□□□ -1.87
NPIPB4-219ENST00000543660 ATP6AP1Q15904 470 aa3.38□□□□□ -1.87
NPIPB4-219ENST00000543660 AWAT2Q6E213 333 aa3.38□□□□□ -1.87
NPIPB4-219ENST00000543660 XAF1Q6GPH4 301 aa3.38□□□□□ -1.87
NPIPB4-219ENST00000543660 MOB1BQ7L9L4 216 aa3.38□□□□□ -1.87
NPIPB4-219ENST00000543660 TRPT1Q86TN4 253 aaKnown RBP3.38□□□□□ -1.87
NPIPB4-219ENST00000543660 NIT1Q86X76 327 aa3.38□□□□□ -1.87
NPIPB4-219ENST00000543660 FAM24BQ8N5W8 94 aa3.38□□□□□ -1.87
NPIPB4-219ENST00000543660 STOML3Q8TAV4 291 aa3.38□□□□□ -1.87
NPIPB4-219ENST00000543660 MRAP2Q96G30 205 aa3.38□□□□□ -1.87
NPIPB4-219ENST00000543660 OR2A7Q96R45 310 aa3.38□□□□□ -1.87
NPIPB4-219ENST00000543660 HIST1H4GQ99525 98 aa3.38□□□□□ -1.87
NPIPB4-219ENST00000543660 HDHD3Q9BSH5 251 aaPredicted RBP3.38□□□□□ -1.87
NPIPB4-219ENST00000543660 TMEM208Q9BTX3 173 aa3.38□□□□□ -1.87
NPIPB4-219ENST00000543660 THTPAQ9BU02 230 aa3.38□□□□□ -1.87
NPIPB4-219ENST00000543660 RHPN1-AS1Q9BWJ2 59 aa3.38□□□□□ -1.87
NPIPB4-219ENST00000543660 OR2D2Q9H210 308 aa3.38□□□□□ -1.87
NPIPB4-219ENST00000543660 AMBNQ9NP70 447 aa3.38□□□□□ -1.87
NPIPB4-219ENST00000543660 TMEM14BQ9NUH8 114 aa3.38□□□□□ -1.87
NPIPB4-219ENST00000543660 RAB22AQ9UL26 194 aa3.38□□□□□ -1.87
NPIPB4-219ENST00000543660 LSM5Q9Y4Y9 91 aaKnown RBP3.38□□□□□ -1.87
NPIPB4-219ENST00000543660 LRP2P98164 4655 aa3.38□□□□□ -1.87
NPIPB4-219ENST00000543660 IGHV3-49A0A0A0MS15 119 aa3.37□□□□□ -1.87
NPIPB4-219ENST00000543660 IGHV7-4-1A0A0J9YVY3 117 aa3.37□□□□□ -1.87
NPIPB4-219ENST00000543660 A0A1B0GV72 72 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms