RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-222ENST00000543627 PATE2Q6UY27 113 aa8.12□□□□□ -1.11
DDB1-222ENST00000543627 LINC00305Q7Z4B0 112 aa8.12□□□□□ -1.11
DDB1-222ENST00000543627 OR11H2Q8NH07 326 aa8.12□□□□□ -1.11
DDB1-222ENST00000543627 THAP6Q8TBB0 222 aa8.12□□□□□ -1.11
DDB1-222ENST00000543627 RNF183Q96D59 192 aa8.12□□□□□ -1.11
DDB1-222ENST00000543627 RARRES2Q99969 163 aa8.12□□□□□ -1.11
DDB1-222ENST00000543627 MED28Q9H204 178 aa8.12□□□□□ -1.11
DDB1-222ENST00000543627 EDA2RQ9HAV5 297 aa8.12□□□□□ -1.11
DDB1-222ENST00000543627 SLC45A2Q9UMX9 530 aa8.12□□□□□ -1.11
DDB1-222ENST00000543627 AGRNO00468 2067 aa8.11□□□□□ -1.11
DDB1-222ENST00000543627 F6UB75 175 aa8.11□□□□□ -1.11
DDB1-222ENST00000543627 H0YIZ8 118 aa8.11□□□□□ -1.11
DDB1-222ENST00000543627 H3BRN7 92 aa8.11□□□□□ -1.11
DDB1-222ENST00000543627 DEFB4AO15263 64 aa8.11□□□□□ -1.11
DDB1-222ENST00000543627 PMS2P11Q13670 270 aa8.11□□□□□ -1.11
DDB1-222ENST00000543627 ATP6V1FQ16864 119 aa8.11□□□□□ -1.11
DDB1-222ENST00000543627 C10orf113Q5VZT2 155 aa8.11□□□□□ -1.11
DDB1-222ENST00000543627 EBLN2Q6P2I7 272 aa8.11□□□□□ -1.11
DDB1-222ENST00000543627 TRPT1Q86TN4 253 aaKnown RBP8.11□□□□□ -1.11
DDB1-222ENST00000543627 OR5C1Q8NGR4 320 aa8.11□□□□□ -1.11
DDB1-222ENST00000543627 SHANK2-AS3Q9BTD1 123 aa8.11□□□□□ -1.11
DDB1-222ENST00000543627 SMIM3Q9BZL3 60 aa8.11□□□□□ -1.11
DDB1-222ENST00000543627 TENM3Q9P273 2699 aa8.11□□□□□ -1.11
DDB1-222ENST00000543627 H3BTX0 84 aa8.1□□□□□ -1.11
DDB1-222ENST00000543627 MPC2O95563 127 aa8.1□□□□□ -1.11
DDB1-222ENST00000543627 PET100P0DJ07 73 aa8.1□□□□□ -1.11
DDB1-222ENST00000543627 RPL7P18124 248 aaKnown RBP8.1□□□□□ -1.11
DDB1-222ENST00000543627 PSMB3P49720 205 aa8.1□□□□□ -1.11
DDB1-222ENST00000543627 MEOX2P50222 304 aa8.1□□□□□ -1.11
DDB1-222ENST00000543627 B2MP61769 119 aa8.1□□□□□ -1.11
DDB1-222ENST00000543627 NUTF2P61970 127 aaKnown RBP8.1□□□□□ -1.11
DDB1-222ENST00000543627 CASC10Q5T4H9 136 aa8.1□□□□□ -1.11
DDB1-222ENST00000543627 GDF5OSQ5U4N7 250 aa8.1□□□□□ -1.11
DDB1-222ENST00000543627 MORN3Q6PF18 240 aaPredicted RBP8.1□□□□□ -1.11
DDB1-222ENST00000543627 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.1□□□□□ -1.11
DDB1-222ENST00000543627 RNF182Q8N6D2 247 aa8.1□□□□□ -1.11
DDB1-222ENST00000543627 C20orf173Q96LM9 149 aa8.1□□□□□ -1.11
DDB1-222ENST00000543627 GPR82Q96P67 336 aa8.1□□□□□ -1.11
DDB1-222ENST00000543627 DNAJC4Q9NNZ3 241 aa8.1□□□□□ -1.11
DDB1-222ENST00000543627 RPRMQ9NS64 109 aa8.1□□□□□ -1.11
DDB1-222ENST00000543627 XCL2Q9UBD3 114 aa8.1□□□□□ -1.11
DDB1-222ENST00000543627 WDR83OSQ9Y284 106 aa8.1□□□□□ -1.11
DDB1-222ENST00000543627 TP53TG1Q9Y2A0 90 aa8.1□□□□□ -1.11
DDB1-222ENST00000543627 IGHV3OR16-12A0A075B7B8 117 aa8.09□□□□□ -1.11
DDB1-222ENST00000543627 TRAV5A0A0B4J249 113 aa8.09□□□□□ -1.11
DDB1-222ENST00000543627 H3BMM0 161 aa8.09□□□□□ -1.11
DDB1-222ENST00000543627 ISLRO14498 428 aa8.09□□□□□ -1.11
DDB1-222ENST00000543627 ZNF705DP0CH99 300 aaPredicted RBP8.09□□□□□ -1.11
DDB1-222ENST00000543627 ZNF705BP0CI00 300 aaPredicted RBP8.09□□□□□ -1.11
DDB1-222ENST00000543627 SPP1P10451 314 aa8.09□□□□□ -1.11
DDB1-222ENST00000543627 CXCL3P19876 107 aa8.09□□□□□ -1.11
DDB1-222ENST00000543627 PLP1P60201 277 aa8.09□□□□□ -1.11
DDB1-222ENST00000543627 FCN2Q15485 313 aa8.09□□□□□ -1.11
DDB1-222ENST00000543627 RGS21Q2M5E4 152 aa8.09□□□□□ -1.11
DDB1-222ENST00000543627 PXDC1Q5TGL8 231 aa8.09□□□□□ -1.11
DDB1-222ENST00000543627 ZNF709Q8N972 641 aa8.09□□□□□ -1.11
DDB1-222ENST00000543627 ZNF738Q8NE65 137 aa8.09□□□□□ -1.11
DDB1-222ENST00000543627 OR1L4Q8NGR5 311 aa8.09□□□□□ -1.11
DDB1-222ENST00000543627 TMEM37Q8WXS4 190 aa8.09□□□□□ -1.11
DDB1-222ENST00000543627 RNF126Q9BV68 326 aa8.09□□□□□ -1.11
DDB1-222ENST00000543627 SLC39A9Q9NUM3 307 aa8.09□□□□□ -1.11
DDB1-222ENST00000543627 MBD2Q9UBB5 411 aa8.09□□□□□ -1.11
DDB1-222ENST00000543627 PXMP4Q9Y6I8 212 aa8.09□□□□□ -1.11
DDB1-222ENST00000543627 ELOA3CA0A087WX78 387 aaPredicted RBP8.08□□□□□ -1.12
DDB1-222ENST00000543627 CXorf65A6NEN9 183 aa8.08□□□□□ -1.12
DDB1-222ENST00000543627 SOCS3O14543 225 aa8.08□□□□□ -1.12
DDB1-222ENST00000543627 C4BPBP20851 252 aa8.08□□□□□ -1.12
DDB1-222ENST00000543627 HLA-DMBP28068 263 aa8.08□□□□□ -1.12
DDB1-222ENST00000543627 RPL12P30050 165 aaKnown RBP8.08□□□□□ -1.12
DDB1-222ENST00000543627 MORN5Q5VZ52 161 aa8.08□□□□□ -1.12
DDB1-222ENST00000543627 BPIFA4PQ86YQ2 179 aa8.08□□□□□ -1.12
DDB1-222ENST00000543627 IL17DQ8TAD2 202 aa8.08□□□□□ -1.12
DDB1-222ENST00000543627 SCGB1C1Q8TD33 95 aa8.08□□□□□ -1.12
DDB1-222ENST00000543627 GATAD1Q8WUU5 269 aa8.08□□□□□ -1.12
DDB1-222ENST00000543627 C17orf77Q96MU5 243 aa8.08□□□□□ -1.12
DDB1-222ENST00000543627 SAV1Q9H4B6 383 aaPredicted RBP8.08□□□□□ -1.12
DDB1-222ENST00000543627 SEPSECSQ9HD40 501 aaKnown RBP8.08□□□□□ -1.12
DDB1-222ENST00000543627 PPP1R14DQ9NXH3 145 aa8.08□□□□□ -1.12
DDB1-222ENST00000543627 RNF24Q9Y225 148 aa8.08□□□□□ -1.12
DDB1-222ENST00000543627 STAB2Q8WWQ8 2551 aa8.07□□□□□ -1.12
DDB1-222ENST00000543627 IFNA5P01569 189 aa8.07□□□□□ -1.12
DDB1-222ENST00000543627 HLA-DRB4P13762 266 aa8.07□□□□□ -1.12
DDB1-222ENST00000543627 RPL29P47914 159 aaKnown RBP8.07□□□□□ -1.12
DDB1-222ENST00000543627 RHOBP62745 196 aa8.07□□□□□ -1.12
DDB1-222ENST00000543627 OPCMLQ14982 345 aa8.07□□□□□ -1.12
DDB1-222ENST00000543627 VWC2Q2TAL6 325 aa8.07□□□□□ -1.12
DDB1-222ENST00000543627 FAM78BQ5VT40 261 aa8.07□□□□□ -1.12
DDB1-222ENST00000543627 SAMD13Q5VXD3 122 aa8.07□□□□□ -1.12
DDB1-222ENST00000543627 FOXI2Q6ZQN5 318 aa8.07□□□□□ -1.12
DDB1-222ENST00000543627 OR11H7Q8NGC8 314 aa8.07□□□□□ -1.12
DDB1-222ENST00000543627 PFDN5Q99471 154 aa8.07□□□□□ -1.12
DDB1-222ENST00000543627 NPCDR1Q9BY65 106 aa8.07□□□□□ -1.12
DDB1-222ENST00000543627 SLC35B3Q9H1N7 401 aa8.07□□□□□ -1.12
DDB1-222ENST00000543627 HLA-DRB4X5D2U9 266 aa8.07□□□□□ -1.12
DDB1-222ENST00000543627 TRAV8-2A0A0B4J237 113 aa8.06□□□□□ -1.12
DDB1-222ENST00000543627 C17orf112F2Z3M2 114 aa8.06□□□□□ -1.12
DDB1-222ENST00000543627 MPDU1O75352 247 aa8.06□□□□□ -1.12
DDB1-222ENST00000543627 GIG44P09565 113 aaPredicted RBP8.06□□□□□ -1.12
DDB1-222ENST00000543627 PRR20EP86478 221 aa8.06□□□□□ -1.12
DDB1-222ENST00000543627 PRR20CP86479 221 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 382 ms