RNA–Protein interactions for RNA: ENST00000543324.1

CIT-213, Transcript of citron rho-interacting serine/threonine kinase, human

TSL 3

Gene CIT, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIT-213	ENST00000543324	NECAP1	Q8NC96	275 aa		4.98	□□□□□ -1.61
CIT-213	ENST00000543324	SLC24A4	Q8NFF2	622 aa		4.98	□□□□□ -1.61
CIT-213	ENST00000543324	OR5B3	Q8NH48	314 aa		4.98	□□□□□ -1.61
CIT-213	ENST00000543324	CT45A3	Q8NHU0	189 aa		4.98	□□□□□ -1.61
CIT-213	ENST00000543324	EAF1	Q96JC9	268 aa	Predicted RBP	4.98	□□□□□ -1.61
CIT-213	ENST00000543324	C18orf15	Q96N68	181 aa		4.98	□□□□□ -1.61
CIT-213	ENST00000543324	RNF2	Q99496	336 aa		4.98	□□□□□ -1.61
CIT-213	ENST00000543324	RSG1	Q9BU20	258 aa		4.98	□□□□□ -1.61
CIT-213	ENST00000543324	KCNIP2	Q9NS61	270 aa		4.98	□□□□□ -1.61
CIT-213	ENST00000543324	LIN7C	Q9NUP9	197 aa	Known RBP	4.98	□□□□□ -1.61
CIT-213	ENST00000543324	PSENEN	Q9NZ42	101 aa		4.98	□□□□□ -1.61
CIT-213	ENST00000543324	TP53TG3	Q9ULZ0	132 aa		4.98	□□□□□ -1.61
CIT-213	ENST00000543324	LY96	Q9Y6Y9	160 aa		4.98	□□□□□ -1.61
CIT-213	ENST00000543324		A0A1W2PRX2	142 aa		4.97	□□□□□ -1.61
CIT-213	ENST00000543324	TCRBV4S1A1T	A0A5B7	111 aa		4.97	□□□□□ -1.61
CIT-213	ENST00000543324	ZNF320	A2RRD8	509 aa		4.97	□□□□□ -1.61
CIT-213	ENST00000543324	LINC01548	A6NM66	108 aa		4.97	□□□□□ -1.61
CIT-213	ENST00000543324	NUPR1	O60356	82 aa		4.97	□□□□□ -1.61
CIT-213	ENST00000543324	RAMP3	O60896	148 aa		4.97	□□□□□ -1.61
CIT-213	ENST00000543324	PGLYRP1	O75594	196 aa	Predicted RBP	4.97	□□□□□ -1.61
CIT-213	ENST00000543324	CDK2AP2	O75956	126 aa		4.97	□□□□□ -1.61
CIT-213	ENST00000543324	HBZ	P02008	142 aa		4.97	□□□□□ -1.61
CIT-213	ENST00000543324	IGF1	P05019	195 aa		4.97	□□□□□ -1.61
CIT-213	ENST00000543324	TMEM11	P17152	192 aa		4.97	□□□□□ -1.61
CIT-213	ENST00000543324	GPR12	P47775	334 aa		4.97	□□□□□ -1.61
CIT-213	ENST00000543324	UBE2G2	P60604	165 aa		4.97	□□□□□ -1.61
CIT-213	ENST00000543324	HTD2	P86397	168 aa		4.97	□□□□□ -1.61
CIT-213	ENST00000543324	SLC38A11	Q08AI6	406 aa		4.97	□□□□□ -1.61
CIT-213	ENST00000543324	ARL16	Q0P5N6	197 aa		4.97	□□□□□ -1.61
CIT-213	ENST00000543324	TMEM267	Q0VDI3	215 aa	Predicted RBP	4.97	□□□□□ -1.61
CIT-213	ENST00000543324	FHL3	Q13643	280 aa		4.97	□□□□□ -1.61
CIT-213	ENST00000543324	C19orf54	Q5BKX5	351 aa		4.97	□□□□□ -1.61
CIT-213	ENST00000543324	OR10J3	Q5JRS4	329 aa		4.97	□□□□□ -1.61
CIT-213	ENST00000543324	FAM78B	Q5VT40	261 aa		4.97	□□□□□ -1.61
CIT-213	ENST00000543324	TRAT1	Q6PIZ9	186 aa		4.97	□□□□□ -1.61
CIT-213	ENST00000543324	C18orf65	Q6ZTR6	163 aa		4.97	□□□□□ -1.61
CIT-213	ENST00000543324	LINC01551	Q86U37	167 aa		4.97	□□□□□ -1.61
CIT-213	ENST00000543324	OR10X1	Q8NGY0	326 aa		4.97	□□□□□ -1.61
CIT-213	ENST00000543324	RPUSD4	Q96CM3	377 aa	Known RBP	4.97	□□□□□ -1.61
CIT-213	ENST00000543324	OR4C12	Q96R67	309 aa		4.97	□□□□□ -1.61
CIT-213	ENST00000543324	HSPB9	Q9BQS6	159 aa		4.97	□□□□□ -1.61
CIT-213	ENST00000543324	TMEM147	Q9BVK8	224 aa		4.97	□□□□□ -1.61
CIT-213	ENST00000543324	MRPL27	Q9P0M9	148 aa	Known RBP	4.97	□□□□□ -1.61
CIT-213	ENST00000543324	MRPS16	Q9Y3D3	137 aa	Known RBP	4.97	□□□□□ -1.61
CIT-213	ENST00000543324	TRAV30	A0A087WSZ9	112 aa		4.96	□□□□□ -1.62
CIT-213	ENST00000543324	IGHV3-43	A0A0B4J1X8	118 aa		4.96	□□□□□ -1.62
CIT-213	ENST00000543324	IGHV3-72	A0A0B4J1Y9	119 aa		4.96	□□□□□ -1.62
CIT-213	ENST00000543324	IGKV1D-13	A0A0B4J2D9	117 aa		4.96	□□□□□ -1.62
CIT-213	ENST00000543324		A0A0G2JRQ6	117 aa		4.96	□□□□□ -1.62
CIT-213	ENST00000543324	MOS	P00540	346 aa		4.96	□□□□□ -1.62
CIT-213	ENST00000543324	IGHG4	P01861	327 aa		4.96	□□□□□ -1.62
CIT-213	ENST00000543324	MT-ND6	P03923	174 aa		4.96	□□□□□ -1.62
CIT-213	ENST00000543324	OR5G3	P0C626	314 aa		4.96	□□□□□ -1.62
CIT-213	ENST00000543324	IGLC2	P0DOY2	106 aa		4.96	□□□□□ -1.62
CIT-213	ENST00000543324	IGLC3	P0DOY3	106 aa		4.96	□□□□□ -1.62
CIT-213	ENST00000543324	IGHV3-43D	P0DP04	118 aa		4.96	□□□□□ -1.62
CIT-213	ENST00000543324	IGKV1-13	P0DP09	117 aa		4.96	□□□□□ -1.62
CIT-213	ENST00000543324	PF4V1	P10720	104 aa		4.96	□□□□□ -1.62
CIT-213	ENST00000543324	CRISP2	P16562	243 aa		4.96	□□□□□ -1.62
CIT-213	ENST00000543324	PSMB8	P28062	276 aa		4.96	□□□□□ -1.62
CIT-213	ENST00000543324	PPIF	P30405	207 aa	Known RBP	4.96	□□□□□ -1.62
CIT-213	ENST00000543324	REG1B	P48304	166 aa		4.96	□□□□□ -1.62
CIT-213	ENST00000543324	CRIP2	P52943	208 aa	Predicted RBP	4.96	□□□□□ -1.62
CIT-213	ENST00000543324	RPL19	P84098	196 aa	Known RBP	4.96	□□□□□ -1.62
CIT-213	ENST00000543324	FOXE3	Q13461	319 aa		4.96	□□□□□ -1.62
CIT-213	ENST00000543324	LTC4S	Q16873	150 aa		4.96	□□□□□ -1.62
CIT-213	ENST00000543324	ASPHD1	Q5U4P2	390 aa		4.96	□□□□□ -1.62
CIT-213	ENST00000543324	OR8G2P	Q6IF36	304 aa		4.96	□□□□□ -1.62
CIT-213	ENST00000543324	FAM71F2	Q6NXP2	309 aa		4.96	□□□□□ -1.62
CIT-213	ENST00000543324	ACSM6	Q6P461	480 aa		4.96	□□□□□ -1.62
CIT-213	ENST00000543324	ZNF833P	Q6ZTB9	187 aa		4.96	□□□□□ -1.62
CIT-213	ENST00000543324	LINC00336	Q6ZUF6	198 aa		4.96	□□□□□ -1.62
CIT-213	ENST00000543324	SMIM15	Q7Z3B0	74 aa		4.96	□□□□□ -1.62
CIT-213	ENST00000543324	ZNF329	Q86UD4	541 aa		4.96	□□□□□ -1.62
CIT-213	ENST00000543324	ZNF738	Q8NE65	137 aa		4.96	□□□□□ -1.62
CIT-213	ENST00000543324	OR1L1	Q8NH94	360 aa		4.96	□□□□□ -1.62
CIT-213	ENST00000543324	IL17D	Q8TAD2	202 aa		4.96	□□□□□ -1.62
CIT-213	ENST00000543324	UBALD1	Q8TB05	177 aa		4.96	□□□□□ -1.62
CIT-213	ENST00000543324	RNASE8	Q8TDE3	154 aa	Known RBP	4.96	□□□□□ -1.62
CIT-213	ENST00000543324	CIB3	Q96Q77	187 aa	Predicted RBP	4.96	□□□□□ -1.62
CIT-213	ENST00000543324	PRR25	Q96S07	402 aa		4.96	□□□□□ -1.62
CIT-213	ENST00000543324	S1PR3	Q99500	378 aa		4.96	□□□□□ -1.62
CIT-213	ENST00000543324	TM2D3	Q9BRN9	247 aa		4.96	□□□□□ -1.62
CIT-213	ENST00000543324	IFI27L2	Q9H2X8	130 aa		4.96	□□□□□ -1.62
CIT-213	ENST00000543324	SCRT2	Q9NQ03	307 aa		4.96	□□□□□ -1.62
CIT-213	ENST00000543324	CCL28	Q9NRJ3	127 aa		4.96	□□□□□ -1.62
CIT-213	ENST00000543324	IL36B	Q9NZH7	164 aa		4.96	□□□□□ -1.62
CIT-213	ENST00000543324	HSPB7	Q9UBY9	170 aa		4.96	□□□□□ -1.62
CIT-213	ENST00000543324	JPT1	Q9UK76	154 aa		4.96	□□□□□ -1.62
CIT-213	ENST00000543324	LAMTOR2	Q9Y2Q5	125 aa		4.96	□□□□□ -1.62
CIT-213	ENST00000543324	CHTOP	Q9Y3Y2	248 aa	Known RBP	4.96	□□□□□ -1.62
CIT-213	ENST00000543324	COX11	Q9Y6N1	276 aa		4.96	□□□□□ -1.62
CIT-213	ENST00000543324	DNAH5	Q8TE73	4624 aa		4.95	□□□□□ -1.62
CIT-213	ENST00000543324	LOC100996750	A0A140TA64	210 aa		4.95	□□□□□ -1.62
CIT-213	ENST00000543324	PMS2P5	A8MQ11	134 aa		4.95	□□□□□ -1.62
CIT-213	ENST00000543324		C9JCJ5	164 aa		4.95	□□□□□ -1.62
CIT-213	ENST00000543324	C17orf112	F2Z3M2	114 aa		4.95	□□□□□ -1.62
CIT-213	ENST00000543324	CCL25	O15444	150 aa		4.95	□□□□□ -1.62
CIT-213	ENST00000543324	SPINT2	O43291	252 aa		4.95	□□□□□ -1.62
CIT-213	ENST00000543324	NDUFA3	O95167	84 aa		4.95	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms