RNA–Protein interactions for RNA: ENST00000543025.5

KDM2B-216, Transcript of lysine demethylase 2B, humanhuman

TSL 1 (best)

Gene KDM2B, Length 2,522 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-216ENST00000543025 SLC25A39Q9BZJ4 359 aaPredicted RBP13.19□□□□□ -0.3
KDM2B-216ENST00000543025 TMEM14CQ9P0S9 112 aa13.19□□□□□ -0.3
KDM2B-216ENST00000543025 MRPS16Q9Y3D3 137 aaKnown RBP13.19□□□□□ -0.3
KDM2B-216ENST00000543025 COL8A1P27658 744 aa13.18□□□□□ -0.3
KDM2B-216ENST00000543025 PRR31Q5SQ13 230 aa13.18□□□□□ -0.3
KDM2B-216ENST00000543025 KMT2BQ9UMN6 2715 aaPredicted RBP13.18□□□□□ -0.3
KDM2B-216ENST00000543025 ZFYVE26Q68DK2 2539 aa13.18□□□□□ -0.3
KDM2B-216ENST00000543025 SRSF12Q8WXF0 261 aaKnown RBP13.18□□□□□ -0.3
KDM2B-216ENST00000543025 RASL11BQ9BPW5 248 aa13.18□□□□□ -0.3
KDM2B-216ENST00000543025 POLEQ07864 2286 aa13.18□□□□□ -0.3
KDM2B-216ENST00000543025 ROS1P08922 2347 aa13.18□□□□□ -0.3
KDM2B-216ENST00000543025 TRAV8-1A0A0A6YYK1 113 aa13.17□□□□□ -0.3
KDM2B-216ENST00000543025 FBXL15Q9H469 300 aa13.17□□□□□ -0.3
KDM2B-216ENST00000543025 CLEC5AQ9NY25 188 aa13.17□□□□□ -0.3
KDM2B-216ENST00000543025 CFAP46Q8IYW2 2715 aa13.17□□□□□ -0.3
KDM2B-216ENST00000543025 CRXO43186 299 aaPredicted RBP13.17□□□□□ -0.3
KDM2B-216ENST00000543025 IGLL1P15814 213 aa13.17□□□□□ -0.3
KDM2B-216ENST00000543025 CD24P25063 80 aa13.17□□□□□ -0.3
KDM2B-216ENST00000543025 APOBEC3AP31941 199 aaPredicted RBP13.17□□□□□ -0.3
KDM2B-216ENST00000543025 PRB3Q04118 309 aaPredicted RBP13.17□□□□□ -0.3
KDM2B-216ENST00000543025 FAM120AOSQ5T036 256 aa13.17□□□□□ -0.3
KDM2B-216ENST00000543025 KIR3DL3Q8N743 410 aa13.17□□□□□ -0.3
KDM2B-216ENST00000543025 ADGRG4Q8IZF6 3080 aa13.17□□□□□ -0.3
KDM2B-216ENST00000543025 I3L2K1 104 aa13.16□□□□□ -0.3
KDM2B-216ENST00000543025 CHEK1O14757 476 aa13.16□□□□□ -0.3
KDM2B-216ENST00000543025 CIARTQ8N365 385 aaPredicted RBP13.16□□□□□ -0.3
KDM2B-216ENST00000543025 RPEQ96AT9 228 aa13.16□□□□□ -0.3
KDM2B-216ENST00000543025 RELNP78509 3460 aa13.16□□□□□ -0.3
KDM2B-216ENST00000543025 IGHV1-24A0A0C4DH33 117 aa13.16□□□□□ -0.3
KDM2B-216ENST00000543025 GOLT1AQ6ZVE7 132 aa13.16□□□□□ -0.3
KDM2B-216ENST00000543025 EXOC3-AS1Q8N2X6 119 aa13.16□□□□□ -0.3
KDM2B-216ENST00000543025 NDFIP1Q9BT67 221 aa13.16□□□□□ -0.3
KDM2B-216ENST00000543025 B9A039 149 aa13.15□□□□□ -0.3
KDM2B-216ENST00000543025 M0QZ24 198 aa13.15□□□□□ -0.3
KDM2B-216ENST00000543025 CCL21O00585 134 aa13.15□□□□□ -0.3
KDM2B-216ENST00000543025 NDUFB8O95169 186 aa13.15□□□□□ -0.3
KDM2B-216ENST00000543025 IGLV2-11P01706 119 aa13.15□□□□□ -0.3
KDM2B-216ENST00000543025 RBP4P02753 201 aa13.15□□□□□ -0.3
KDM2B-216ENST00000543025 HOXB4P17483 251 aaPredicted RBP13.15□□□□□ -0.3
KDM2B-216ENST00000543025 SPATA12Q7Z6I5 190 aa13.15□□□□□ -0.3
KDM2B-216ENST00000543025 PRNTQ86SH4 94 aa13.15□□□□□ -0.3
KDM2B-216ENST00000543025 C1RLQ9NZP8 487 aa13.15□□□□□ -0.3
KDM2B-216ENST00000543025 LOC102724200A0A096LPH7 203 aaPredicted RBP13.15□□□□□ -0.3
KDM2B-216ENST00000543025 SH2D7A6NKC9 451 aaPredicted RBP13.15□□□□□ -0.3
KDM2B-216ENST00000543025 SIAH2O43255 324 aa13.15□□□□□ -0.3
KDM2B-216ENST00000543025 UQCRFS1P47985 274 aa13.15□□□□□ -0.3
KDM2B-216ENST00000543025 PLGLAQ15195 96 aa13.15□□□□□ -0.3
KDM2B-216ENST00000543025 TMEM190Q8WZ59 177 aa13.15□□□□□ -0.3
KDM2B-216ENST00000543025 NBASA2RRP1 2371 aa13.15□□□□□ -0.3
KDM2B-216ENST00000543025 HAX1O00165 279 aa13.14□□□□□ -0.31
KDM2B-216ENST00000543025 LEPROTL1O95214 131 aa13.14□□□□□ -0.31
KDM2B-216ENST00000543025 COX7A1P24310 79 aa13.14□□□□□ -0.31
KDM2B-216ENST00000543025 HINT1P49773 126 aaPredicted RBP13.14□□□□□ -0.31
KDM2B-216ENST00000543025 ZNF843Q8N446 348 aa13.14□□□□□ -0.31
KDM2B-216ENST00000543025 RNF5Q99942 180 aa13.14□□□□□ -0.31
KDM2B-216ENST00000543025 PKDREJQ9NTG1 2253 aa13.14□□□□□ -0.31
KDM2B-216ENST00000543025 PPIAL4CA0A0B4J2A2 164 aa13.14□□□□□ -0.31
KDM2B-216ENST00000543025 TRBV6-1A0A0K0K1D8 114 aa13.14□□□□□ -0.31
KDM2B-216ENST00000543025 OR4C46A6NHA9 309 aa13.14□□□□□ -0.31
KDM2B-216ENST00000543025 TOX4O94842 621 aa13.14□□□□□ -0.31
KDM2B-216ENST00000543025 PPIAL4GP0DN37 164 aa13.14□□□□□ -0.31
KDM2B-216ENST00000543025 GNLYP22749 145 aa13.14□□□□□ -0.31
KDM2B-216ENST00000543025 SRSF8Q9BRL6 282 aaKnown RBP13.14□□□□□ -0.31
KDM2B-216ENST00000543025 SYS1-DBNDD2H3BUS1 97 aa13.13□□□□□ -0.31
KDM2B-216ENST00000543025 IGKV1-17P01599 117 aa13.13□□□□□ -0.31
KDM2B-216ENST00000543025 APOHP02749 345 aaPredicted RBP13.13□□□□□ -0.31
KDM2B-216ENST00000543025 C16orf54Q6UWD8 224 aa13.13□□□□□ -0.31
KDM2B-216ENST00000543025 BPIFA4PQ86YQ2 179 aa13.13□□□□□ -0.31
KDM2B-216ENST00000543025 RNF24Q9Y225 148 aa13.13□□□□□ -0.31
KDM2B-216ENST00000543025 MALRD1Q5VYJ5 2156 aa13.13□□□□□ -0.31
KDM2B-216ENST00000543025 DMRTA1Q5VZB9 504 aa13.13□□□□□ -0.31
KDM2B-216ENST00000543025 PPP1R14DQ9NXH3 145 aa13.13□□□□□ -0.31
KDM2B-216ENST00000543025 TRBV19A0A075B6N1 114 aa13.12□□□□□ -0.31
KDM2B-216ENST00000543025 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.12□□□□□ -0.31
KDM2B-216ENST00000543025 CD3EP07766 207 aa13.12□□□□□ -0.31
KDM2B-216ENST00000543025 TMEM75Q8N9X5 138 aa13.12□□□□□ -0.31
KDM2B-216ENST00000543025 OR4F17Q8NGA8 305 aa13.12□□□□□ -0.31
KDM2B-216ENST00000543025 LYNX1G3V0Z9 82 aa13.12□□□□□ -0.31
KDM2B-216ENST00000543025 LYNX1P0DP58 116 aa13.12□□□□□ -0.31
KDM2B-216ENST00000543025 ADORA2A-AS1P86434 159 aa13.12□□□□□ -0.31
KDM2B-216ENST00000543025 ORAOV1Q8WV07 137 aa13.12□□□□□ -0.31
KDM2B-216ENST00000543025 SHANK2-AS3Q9BTD1 123 aa13.12□□□□□ -0.31
KDM2B-216ENST00000543025 PCNX1Q96RV3 2341 aa13.12□□□□□ -0.31
KDM2B-216ENST00000543025 H3BRN7 92 aa13.11□□□□□ -0.31
KDM2B-216ENST00000543025 CNIH1O95406 144 aa13.11□□□□□ -0.31
KDM2B-216ENST00000543025 LIPFP07098 398 aa13.11□□□□□ -0.31
KDM2B-216ENST00000543025 OR5AL1P0C617 328 aa13.11□□□□□ -0.31
KDM2B-216ENST00000543025 MUC15Q8N387 334 aa13.11□□□□□ -0.31
KDM2B-216ENST00000543025 ST20Q9HBF5 79 aa13.11□□□□□ -0.31
KDM2B-216ENST00000543025 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.11□□□□□ -0.31
KDM2B-216ENST00000543025 LY6LH3BQJ8 138 aa13.11□□□□□ -0.31
KDM2B-216ENST00000543025 K7EIM0 57 aa13.11□□□□□ -0.31
KDM2B-216ENST00000543025 K7EQM0 130 aa13.11□□□□□ -0.31
KDM2B-216ENST00000543025 ZC2HC1AQ96GY0 325 aa13.11□□□□□ -0.31
KDM2B-216ENST00000543025 A0A1B0GUT8 65 aa13.1□□□□□ -0.31
KDM2B-216ENST00000543025 LINC00173Q6ZV60 143 aa13.1□□□□□ -0.31
KDM2B-216ENST00000543025 Q71RC1 249 aaPredicted RBP13.1□□□□□ -0.31
KDM2B-216ENST00000543025 LYPD1Q8N2G4 141 aa13.1□□□□□ -0.31
KDM2B-216ENST00000543025 HTR1DP28221 377 aa13.1□□□□□ -0.31
KDM2B-216ENST00000543025 SIGLEC15Q6ZMC9 328 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms