RNA–Protein interactions for RNA: ENST00000542830.5

LTBR-210, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-210ENST00000542830 C5orf51A6NDU8 294 aa12.62□□□□□ -0.39
LTBR-210ENST00000542830 FAM25EA8MYX2 175 aa12.62□□□□□ -0.39
LTBR-210ENST00000542830 IGKV3-20P01619 116 aa12.62□□□□□ -0.39
LTBR-210ENST00000542830 RPL7P18124 248 aaKnown RBP12.62□□□□□ -0.39
LTBR-210ENST00000542830 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.62□□□□□ -0.39
LTBR-210ENST00000542830 C12orf45Q8N5I9 185 aaPredicted RBP12.62□□□□□ -0.39
LTBR-210ENST00000542830 OR4B1Q8NGF8 309 aa12.62□□□□□ -0.39
LTBR-210ENST00000542830 C2CD4CQ8TF44 421 aa12.62□□□□□ -0.39
LTBR-210ENST00000542830 NEU1Q99519 415 aa12.62□□□□□ -0.39
LTBR-210ENST00000542830 SEC22CQ9BRL7 303 aa12.62□□□□□ -0.39
LTBR-210ENST00000542830 ELOA3CA0A087WX78 387 aaPredicted RBP12.61□□□□□ -0.39
LTBR-210ENST00000542830 DEDDO75618 318 aa12.61□□□□□ -0.39
LTBR-210ENST00000542830 OR5G3P0C626 314 aa12.61□□□□□ -0.39
LTBR-210ENST00000542830 DEFB1P60022 68 aa12.61□□□□□ -0.39
LTBR-210ENST00000542830 PSG9Q00887 426 aa12.61□□□□□ -0.39
LTBR-210ENST00000542830 PXDC1Q5TGL8 231 aa12.61□□□□□ -0.39
LTBR-210ENST00000542830 ZNF705AQ6ZN79 300 aaPredicted RBP12.61□□□□□ -0.39
LTBR-210ENST00000542830 ZNF546Q86UE3 836 aa12.61□□□□□ -0.39
LTBR-210ENST00000542830 SCRT1Q9BWW7 348 aa12.61□□□□□ -0.39
LTBR-210ENST00000542830 A0A0J9YX75 114 aa12.6□□□□□ -0.39
LTBR-210ENST00000542830 SMIM9A6NGZ8 99 aa12.6□□□□□ -0.39
LTBR-210ENST00000542830 PVALBP20472 110 aaPredicted RBP12.6□□□□□ -0.39
LTBR-210ENST00000542830 HLA-DMBP28068 263 aa12.6□□□□□ -0.39
LTBR-210ENST00000542830 SLC38A11Q08AI6 406 aa12.6□□□□□ -0.39
LTBR-210ENST00000542830 ASAH1Q13510 395 aa12.6□□□□□ -0.39
LTBR-210ENST00000542830 LGALS9CQ6DKI2 356 aa12.6□□□□□ -0.39
LTBR-210ENST00000542830 ZNF709Q8N972 641 aa12.6□□□□□ -0.39
LTBR-210ENST00000542830 C20orf173Q96LM9 149 aa12.6□□□□□ -0.39
LTBR-210ENST00000542830 C2orf50Q96LR7 162 aa12.6□□□□□ -0.39
LTBR-210ENST00000542830 LSM5Q9Y4Y9 91 aaKnown RBP12.6□□□□□ -0.39
LTBR-210ENST00000542830 TMEM189A5PLL7 270 aa12.59□□□□□ -0.39
LTBR-210ENST00000542830 ZNF705FA8MVS1 300 aaPredicted RBP12.59□□□□□ -0.39
LTBR-210ENST00000542830 F6UB75 175 aa12.59□□□□□ -0.39
LTBR-210ENST00000542830 GOSR2O14653 212 aa12.59□□□□□ -0.39
LTBR-210ENST00000542830 ZNF705DP0CH99 300 aaPredicted RBP12.59□□□□□ -0.39
LTBR-210ENST00000542830 ZNF705BP0CI00 300 aaPredicted RBP12.59□□□□□ -0.39
LTBR-210ENST00000542830 BCAP31P51572 246 aa12.59□□□□□ -0.39
LTBR-210ENST00000542830 FXYD7P58549 80 aa12.59□□□□□ -0.39
LTBR-210ENST00000542830 ARL16Q0P5N6 197 aa12.59□□□□□ -0.39
LTBR-210ENST00000542830 FAM78BQ5VT40 261 aa12.59□□□□□ -0.39
LTBR-210ENST00000542830 GSG1LQ6UXU4 331 aa12.59□□□□□ -0.39
LTBR-210ENST00000542830 C17orf77Q96MU5 243 aa12.59□□□□□ -0.39
LTBR-210ENST00000542830 ARL6Q9H0F7 186 aa12.59□□□□□ -0.39
LTBR-210ENST00000542830 TRAV10A0A0B4J240 114 aa12.58□□□□□ -0.4
LTBR-210ENST00000542830 AGPAT2O15120 278 aa12.58□□□□□ -0.4
LTBR-210ENST00000542830 CAV2P51636 162 aa12.58□□□□□ -0.4
LTBR-210ENST00000542830 FGL1Q08830 312 aa12.58□□□□□ -0.4
LTBR-210ENST00000542830 SLC35B3Q9H1N7 401 aa12.58□□□□□ -0.4
LTBR-210ENST00000542830 ARV1Q9H2C2 271 aa12.58□□□□□ -0.4
LTBR-210ENST00000542830 GOLT1BQ9Y3E0 138 aa12.58□□□□□ -0.4
LTBR-210ENST00000542830 A0A087X0K7 114 aa12.57□□□□□ -0.4
LTBR-210ENST00000542830 A8MTW9 85 aa12.57□□□□□ -0.4
LTBR-210ENST00000542830 DUSP14O95147 198 aaKnown RBP12.57□□□□□ -0.4
LTBR-210ENST00000542830 RAB31Q13636 194 aa12.57□□□□□ -0.4
LTBR-210ENST00000542830 Q6ZTC4 211 aa12.57□□□□□ -0.4
LTBR-210ENST00000542830 ENKURQ8TC29 256 aa12.57□□□□□ -0.4
LTBR-210ENST00000542830 UHRF2Q96PU4 802 aa12.57□□□□□ -0.4
LTBR-210ENST00000542830 IGHV3OR16-12A0A075B7B8 117 aa12.56□□□□□ -0.4
LTBR-210ENST00000542830 TRAV8-2A0A0B4J237 113 aa12.56□□□□□ -0.4
LTBR-210ENST00000542830 IGLL5B9A064 214 aa12.56□□□□□ -0.4
LTBR-210ENST00000542830 AMBPP02760 352 aa12.56□□□□□ -0.4
LTBR-210ENST00000542830 PATE2Q6UY27 113 aa12.56□□□□□ -0.4
LTBR-210ENST00000542830 C11orf1Q9H5F2 150 aa12.56□□□□□ -0.4
LTBR-210ENST00000542830 CELA1Q9UNI1 258 aa12.56□□□□□ -0.4
LTBR-210ENST00000542830 RFNGQ9Y644 331 aa12.56□□□□□ -0.4
LTBR-210ENST00000542830 A6NHS1 94 aa12.55□□□□□ -0.4
LTBR-210ENST00000542830 UPK1BO75841 260 aa12.55□□□□□ -0.4
LTBR-210ENST00000542830 CXCL2P19875 107 aa12.55□□□□□ -0.4
LTBR-210ENST00000542830 S100A10P60903 97 aa12.55□□□□□ -0.4
LTBR-210ENST00000542830 C12orf74Q32Q52 190 aa12.55□□□□□ -0.4
LTBR-210ENST00000542830 LINC00305Q7Z4B0 112 aa12.55□□□□□ -0.4
LTBR-210ENST00000542830 LRRC20Q8TCA0 184 aa12.55□□□□□ -0.4
LTBR-210ENST00000542830 MGST2Q99735 147 aa12.55□□□□□ -0.4
LTBR-210ENST00000542830 GPN1Q9HCN4 374 aaPredicted RBP12.55□□□□□ -0.4
LTBR-210ENST00000542830 LYRM2Q9NU23 88 aaPredicted RBP12.55□□□□□ -0.4
LTBR-210ENST00000542830 UQCC1Q9NVA1 299 aa12.55□□□□□ -0.4
LTBR-210ENST00000542830 PTTG2Q9NZH5 202 aa12.55□□□□□ -0.4
LTBR-210ENST00000542830 TEX48A0A1B0GUV7 120 aa12.54□□□□□ -0.4
LTBR-210ENST00000542830 FAM24AA6NFZ4 105 aa12.54□□□□□ -0.4
LTBR-210ENST00000542830 COX7A2P2O60397 106 aa12.54□□□□□ -0.4
LTBR-210ENST00000542830 CST7O76096 145 aa12.54□□□□□ -0.4
LTBR-210ENST00000542830 HBE1P02100 147 aa12.54□□□□□ -0.4
LTBR-210ENST00000542830 SPART-AS1P0CW21 52 aa12.54□□□□□ -0.4
LTBR-210ENST00000542830 CAMLGP49069 296 aa12.54□□□□□ -0.4
LTBR-210ENST00000542830 CNN1P51911 297 aaKnown RBP12.54□□□□□ -0.4
LTBR-210ENST00000542830 IL15RAQ13261 267 aa12.54□□□□□ -0.4
LTBR-210ENST00000542830 IGFL4Q6B9Z1 124 aa12.54□□□□□ -0.4
LTBR-210ENST00000542830 AMTNQ6UX39 209 aa12.54□□□□□ -0.4
LTBR-210ENST00000542830 Q6ZRG5 221 aa12.54□□□□□ -0.4
LTBR-210ENST00000542830 STX12Q86Y82 276 aa12.54□□□□□ -0.4
LTBR-210ENST00000542830 ZNF738Q8NE65 137 aa12.54□□□□□ -0.4
LTBR-210ENST00000542830 IGF2BP2-AS1Q96M15 143 aa12.54□□□□□ -0.4
LTBR-210ENST00000542830 APLNQ9ULZ1 77 aa12.54□□□□□ -0.4
LTBR-210ENST00000542830 CXCL3P19876 107 aa12.53□□□□□ -0.4
LTBR-210ENST00000542830 S100A11P31949 105 aa12.53□□□□□ -0.4
LTBR-210ENST00000542830 SULT1A1P50225 295 aa12.53□□□□□ -0.4
LTBR-210ENST00000542830 HBG1P69891 147 aa12.53□□□□□ -0.4
LTBR-210ENST00000542830 HBG2P69892 147 aa12.53□□□□□ -0.4
LTBR-210ENST00000542830 RAB32Q13637 225 aa12.53□□□□□ -0.4
LTBR-210ENST00000542830 BPIFA4PQ86YQ2 179 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms