RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 SCTP09683 121 aa4.62□□□□□ -1.67
XRCC4-206ENST00000542685 CFC1BP0CG36 223 aa4.62□□□□□ -1.67
XRCC4-206ENST00000542685 CFC1P0CG37 223 aa4.62□□□□□ -1.67
XRCC4-206ENST00000542685 GP1BBP13224 206 aa4.62□□□□□ -1.67
XRCC4-206ENST00000542685 MYOD1P15172 320 aa4.62□□□□□ -1.67
XRCC4-206ENST00000542685 FXYD4P59646 89 aa4.62□□□□□ -1.67
XRCC4-206ENST00000542685 KRTAP10-5P60370 271 aa4.62□□□□□ -1.67
XRCC4-206ENST00000542685 RRN3P1Q2M238 152 aa4.62□□□□□ -1.67
XRCC4-206ENST00000542685 SPRNQ5BIV9 151 aa4.62□□□□□ -1.67
XRCC4-206ENST00000542685 MED12LQ86YW9 2145 aa4.62□□□□□ -1.67
XRCC4-206ENST00000542685 TMEM178AQ8NBL3 297 aa4.62□□□□□ -1.67
XRCC4-206ENST00000542685 MYOZ3Q8TDC0 251 aa4.62□□□□□ -1.67
XRCC4-206ENST00000542685 NAT6Q93015 286 aa4.62□□□□□ -1.67
XRCC4-206ENST00000542685 PRADC1Q9BSG0 188 aa4.62□□□□□ -1.67
XRCC4-206ENST00000542685 NPCDR1Q9BY65 106 aa4.62□□□□□ -1.67
XRCC4-206ENST00000542685 FAM60AQ9NP50 221 aa4.62□□□□□ -1.67
XRCC4-206ENST00000542685 TMEM167BQ9NRX6 74 aa4.62□□□□□ -1.67
XRCC4-206ENST00000542685 HIGD1AQ9Y241 93 aa4.62□□□□□ -1.67
XRCC4-206ENST00000542685 PIGLQ9Y2B2 252 aa4.62□□□□□ -1.67
XRCC4-206ENST00000542685 TNRC6BQ9UPQ9 1833 aaKnown RBP4.62□□□□□ -1.67
XRCC4-206ENST00000542685 PCNTO95613 3336 aa4.62□□□□□ -1.67
XRCC4-206ENST00000542685 PHF3Q92576 2039 aaKnown RBP4.62□□□□□ -1.67
XRCC4-206ENST00000542685 IGKV1D-8A0A087WSZ0 117 aa4.61□□□□□ -1.67
XRCC4-206ENST00000542685 TMED7-TICAM2A0A0A6YYA0 188 aa4.61□□□□□ -1.67
XRCC4-206ENST00000542685 A0A1B0GXF2 115 aa4.61□□□□□ -1.67
XRCC4-206ENST00000542685 A0A1W2PQF6 199 aa4.61□□□□□ -1.67
XRCC4-206ENST00000542685 C5orf67F2Z3F1 127 aa4.61□□□□□ -1.67
XRCC4-206ENST00000542685 TNFSF12O43508 249 aa4.61□□□□□ -1.67
XRCC4-206ENST00000542685 FKBP2P26885 142 aaKnown RBP4.61□□□□□ -1.67
XRCC4-206ENST00000542685 RPS27P42677 84 aaKnown RBP4.61□□□□□ -1.67
XRCC4-206ENST00000542685 TNFRSF4P43489 277 aa4.61□□□□□ -1.67
XRCC4-206ENST00000542685 DEFB103AP81534 67 aa4.61□□□□□ -1.67
XRCC4-206ENST00000542685 SRYQ05066 204 aa4.61□□□□□ -1.67
XRCC4-206ENST00000542685 DIAPH2-AS1Q14236 149 aa4.61□□□□□ -1.67
XRCC4-206ENST00000542685 GUSBP1Q15486 140 aa4.61□□□□□ -1.67
XRCC4-206ENST00000542685 KISS1Q15726 138 aa4.61□□□□□ -1.67
XRCC4-206ENST00000542685 MS4A18Q3C1V0 323 aa4.61□□□□□ -1.67
XRCC4-206ENST00000542685 SERTAD4-AS1Q5TG53 156 aa4.61□□□□□ -1.67
XRCC4-206ENST00000542685 TSPO2Q5TGU0 170 aa4.61□□□□□ -1.67
XRCC4-206ENST00000542685 SH2D6Q7Z4S9 175 aa4.61□□□□□ -1.67
XRCC4-206ENST00000542685 CEND1Q8N111 149 aa4.61□□□□□ -1.67
XRCC4-206ENST00000542685 GAPTQ8N292 157 aa4.61□□□□□ -1.67
XRCC4-206ENST00000542685 IL1F10Q8WWZ1 152 aa4.61□□□□□ -1.67
XRCC4-206ENST00000542685 RASL10AQ92737 203 aa4.61□□□□□ -1.67
XRCC4-206ENST00000542685 COQ2Q96H96 371 aa4.61□□□□□ -1.67
XRCC4-206ENST00000542685 DUX3Q96PT4 197 aa4.61□□□□□ -1.67
XRCC4-206ENST00000542685 LINC01587Q99440 93 aa4.61□□□□□ -1.67
XRCC4-206ENST00000542685 ASCL2Q99929 193 aa4.61□□□□□ -1.67
XRCC4-206ENST00000542685 GFRA4Q9GZZ7 299 aa4.61□□□□□ -1.67
XRCC4-206ENST00000542685 FBXL15Q9H469 300 aa4.61□□□□□ -1.67
XRCC4-206ENST00000542685 HILPDAQ9Y5L2 63 aa4.61□□□□□ -1.67
XRCC4-206ENST00000542685 MPC1Q9Y5U8 109 aa4.61□□□□□ -1.67
XRCC4-206ENST00000542685 RALGAPA1Q6GYQ0 2036 aa4.61□□□□□ -1.67
XRCC4-206ENST00000542685 TDRD6O60522 2096 aaKnown RBP4.61□□□□□ -1.67
XRCC4-206ENST00000542685 ARHGAP21Q5T5U3 1957 aa4.6□□□□□ -1.67
XRCC4-206ENST00000542685 FREM3P0C091 2139 aa4.6□□□□□ -1.67
XRCC4-206ENST00000542685 FAM240AA0A1B0GVK7 77 aa4.6□□□□□ -1.67
XRCC4-206ENST00000542685 TCRBV4S1A1TA0A5B7 111 aa4.6□□□□□ -1.67
XRCC4-206ENST00000542685 LILRA5A6NI73 299 aa4.6□□□□□ -1.67
XRCC4-206ENST00000542685 M0R2P5 195 aa4.6□□□□□ -1.67
XRCC4-206ENST00000542685 UQCRQO14949 82 aa4.6□□□□□ -1.67
XRCC4-206ENST00000542685 NPFFO15130 113 aa4.6□□□□□ -1.67
XRCC4-206ENST00000542685 CRLF1O75462 422 aa4.6□□□□□ -1.67
XRCC4-206ENST00000542685 NDUFA7O95182 113 aa4.6□□□□□ -1.67
XRCC4-206ENST00000542685 IGHG1P01857 330 aa4.6□□□□□ -1.67
XRCC4-206ENST00000542685 GLRXP35754 106 aa4.6□□□□□ -1.67
XRCC4-206ENST00000542685 EMP1P54849 157 aa4.6□□□□□ -1.67
XRCC4-206ENST00000542685 HBBP68871 147 aa4.6□□□□□ -1.67
XRCC4-206ENST00000542685 CENPWQ5EE01 88 aa4.6□□□□□ -1.67
XRCC4-206ENST00000542685 FAM159AQ6UWV7 190 aa4.6□□□□□ -1.67
XRCC4-206ENST00000542685 FAM19A5Q7Z5A7 132 aaPredicted RBP4.6□□□□□ -1.67
XRCC4-206ENST00000542685 RPRMLQ8N4K4 120 aa4.6□□□□□ -1.67
XRCC4-206ENST00000542685 GATD1Q8NB37 220 aa4.6□□□□□ -1.67
XRCC4-206ENST00000542685 GATAD1Q8WUU5 269 aa4.6□□□□□ -1.67
XRCC4-206ENST00000542685 CHAC1Q9BUX1 264 aa4.6□□□□□ -1.67
XRCC4-206ENST00000542685 C1QTNF5Q9BXJ0 243 aa4.6□□□□□ -1.67
XRCC4-206ENST00000542685 C19orf25Q9UFG5 118 aaPredicted RBP4.6□□□□□ -1.67
XRCC4-206ENST00000542685 WDR83OSQ9Y284 106 aa4.6□□□□□ -1.67
XRCC4-206ENST00000542685 INSIG2Q9Y5U4 225 aa4.6□□□□□ -1.67
XRCC4-206ENST00000542685 PCNX3Q9H6A9 2034 aa4.6□□□□□ -1.67
XRCC4-206ENST00000542685 IGLV3-32A0A0A0MS00 114 aa4.59□□□□□ -1.67
XRCC4-206ENST00000542685 TRBV7-7A0A0K0K1E9 115 aa4.59□□□□□ -1.67
XRCC4-206ENST00000542685 A8MWV9 139 aa4.59□□□□□ -1.67
XRCC4-206ENST00000542685 TMEM150CB9EJG8 249 aa4.59□□□□□ -1.67
XRCC4-206ENST00000542685 H3BSH0 61 aa4.59□□□□□ -1.67
XRCC4-206ENST00000542685 RS1O15537 224 aa4.59□□□□□ -1.67
XRCC4-206ENST00000542685 ZG16O60844 167 aa4.59□□□□□ -1.67
XRCC4-206ENST00000542685 DUSP14O95147 198 aaKnown RBP4.59□□□□□ -1.67
XRCC4-206ENST00000542685 NCR2O95944 276 aa4.59□□□□□ -1.67
XRCC4-206ENST00000542685 RBP4P02753 201 aa4.59□□□□□ -1.67
XRCC4-206ENST00000542685 MGST1P10620 155 aaKnown RBP4.59□□□□□ -1.67
XRCC4-206ENST00000542685 GCHFRP30047 84 aa4.59□□□□□ -1.67
XRCC4-206ENST00000542685 MARCH3Q86UD3 253 aa4.59□□□□□ -1.67
XRCC4-206ENST00000542685 ZNF524Q96C55 264 aa4.59□□□□□ -1.67
XRCC4-206ENST00000542685 TMEM101Q96IK0 257 aa4.59□□□□□ -1.67
XRCC4-206ENST00000542685 OR2H1Q9GZK4 316 aa4.59□□□□□ -1.67
XRCC4-206ENST00000542685 IDI2-AS1Q9NZ38 188 aa4.59□□□□□ -1.67
XRCC4-206ENST00000542685 PRO0628Q9UI54 55 aa4.59□□□□□ -1.67
XRCC4-206ENST00000542685 ATG2BQ96BY7 2078 aa4.58□□□□□ -1.68
XRCC4-206ENST00000542685 TRBV6-6A0A0A6YYG2 114 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms