RNA–Protein interactions for RNA: ENST00000542420.6

SS18-205, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2 BASIC

Gene SS18, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-205ENST00000542420 NPIPB6E9PJ23 425 aa7.78□□□□□ -1.16
SS18-205ENST00000542420 K7EQM0 130 aa7.78□□□□□ -1.16
SS18-205ENST00000542420 ZNF253O75346 499 aa7.78□□□□□ -1.16
SS18-205ENST00000542420 OR2J3O76001 311 aa7.78□□□□□ -1.16
SS18-205ENST00000542420 ZNF705DP0CH99 300 aaPredicted RBP7.78□□□□□ -1.16
SS18-205ENST00000542420 ZNF705BP0CI00 300 aaPredicted RBP7.78□□□□□ -1.16
SS18-205ENST00000542420 CBLN1P23435 193 aa7.78□□□□□ -1.16
SS18-205ENST00000542420 CTRLP40313 264 aa7.78□□□□□ -1.16
SS18-205ENST00000542420 IER3P46695 156 aa7.78□□□□□ -1.16
SS18-205ENST00000542420 RAB9AP51151 201 aa7.78□□□□□ -1.16
SS18-205ENST00000542420 LINC00310P59036 64 aa7.78□□□□□ -1.16
SS18-205ENST00000542420 RNF151Q2KHN1 245 aa7.78□□□□□ -1.16
SS18-205ENST00000542420 FAM162BQ5T6X4 162 aa7.78□□□□□ -1.16
SS18-205ENST00000542420 RUSC1-AS1Q66K80 236 aa7.78□□□□□ -1.16
SS18-205ENST00000542420 TOMM20LQ6UXN7 152 aa7.78□□□□□ -1.16
SS18-205ENST00000542420 ZNF491Q8N8L2 437 aa7.78□□□□□ -1.16
SS18-205ENST00000542420 RNF125Q96EQ8 232 aa7.78□□□□□ -1.16
SS18-205ENST00000542420 FANCD2OSQ96PS1 177 aa7.78□□□□□ -1.16
SS18-205ENST00000542420 HILPDAQ9Y5L2 63 aa7.78□□□□□ -1.16
SS18-205ENST00000542420 A8MWL6 223 aa7.78□□□□□ -1.16
SS18-205ENST00000542420 MRPS12O15235 138 aaKnown RBP7.78□□□□□ -1.16
SS18-205ENST00000542420 IGLC2P0DOY2 106 aa7.78□□□□□ -1.16
SS18-205ENST00000542420 DLX1P56177 255 aa7.78□□□□□ -1.16
SS18-205ENST00000542420 KLRD1Q13241 179 aa7.78□□□□□ -1.16
SS18-205ENST00000542420 Q6ZVH6 145 aa7.78□□□□□ -1.16
SS18-205ENST00000542420 FAM110DQ8TAY7 271 aaPredicted RBP7.78□□□□□ -1.16
SS18-205ENST00000542420 PAM16Q9Y3D7 125 aa7.78□□□□□ -1.16
SS18-205ENST00000542420 TRBV19A0A075B6N1 114 aa7.77□□□□□ -1.17
SS18-205ENST00000542420 NDUFS8O00217 210 aa7.77□□□□□ -1.17
SS18-205ENST00000542420 GNG7O60262 68 aa7.77□□□□□ -1.17
SS18-205ENST00000542420 TOX4O94842 621 aa7.77□□□□□ -1.17
SS18-205ENST00000542420 IGHV3-48P01763 117 aa7.77□□□□□ -1.17
SS18-205ENST00000542420 ZFP36P26651 326 aaKnown RBP7.77□□□□□ -1.17
SS18-205ENST00000542420 CDKN1AP38936 164 aa7.77□□□□□ -1.17
SS18-205ENST00000542420 LMO4P61968 165 aa7.77□□□□□ -1.17
SS18-205ENST00000542420 HES1Q14469 280 aa7.77□□□□□ -1.17
SS18-205ENST00000542420 ASPHD1Q5U4P2 390 aa7.77□□□□□ -1.17
SS18-205ENST00000542420 RPP21Q9H633 154 aaKnown RBP7.77□□□□□ -1.17
SS18-205ENST00000542420 ZNF586Q9NXT0 402 aa7.77□□□□□ -1.17
SS18-205ENST00000542420 TP53TG3Q9ULZ0 132 aa7.77□□□□□ -1.17
SS18-205ENST00000542420 A0A1W2PPR1 153 aa7.77□□□□□ -1.17
SS18-205ENST00000542420 LY6HO94772 140 aa7.77□□□□□ -1.17
SS18-205ENST00000542420 PSG9Q00887 426 aa7.77□□□□□ -1.17
SS18-205ENST00000542420 KLF5Q13887 457 aaPredicted RBP7.77□□□□□ -1.17
SS18-205ENST00000542420 COX8CQ7Z4L0 72 aa7.77□□□□□ -1.17
SS18-205ENST00000542420 Q86TA4 180 aa7.77□□□□□ -1.17
SS18-205ENST00000542420 Q8N976 141 aa7.77□□□□□ -1.17
SS18-205ENST00000542420 UBTD1Q9HAC8 227 aa7.77□□□□□ -1.17
SS18-205ENST00000542420 SERTAD4Q9NUC0 356 aa7.77□□□□□ -1.17
SS18-205ENST00000542420 C21orf62Q9NYP8 219 aa7.77□□□□□ -1.17
SS18-205ENST00000542420 COX11Q9Y6N1 276 aa7.77□□□□□ -1.17
SS18-205ENST00000542420 A0A1B0GXF2 115 aa7.76□□□□□ -1.17
SS18-205ENST00000542420 CBY3A6NI87 242 aa7.76□□□□□ -1.17
SS18-205ENST00000542420 CRIP2P52943 208 aaPredicted RBP7.76□□□□□ -1.17
SS18-205ENST00000542420 FOXA3P55318 350 aaPredicted RBP7.76□□□□□ -1.17
SS18-205ENST00000542420 LY6DQ14210 128 aa7.76□□□□□ -1.17
SS18-205ENST00000542420 Q8N9W7 124 aa7.76□□□□□ -1.17
SS18-205ENST00000542420 BLNKQ8WV28 456 aa7.76□□□□□ -1.17
SS18-205ENST00000542420 RPH3ALQ9UNE2 315 aa7.76□□□□□ -1.17
SS18-205ENST00000542420 PIEZO2Q9H5I5 2752 aa7.76□□□□□ -1.17
SS18-205ENST00000542420 A0A1B0GW15 77 aa7.75□□□□□ -1.17
SS18-205ENST00000542420 A0A1W2PRD5 423 aa7.75□□□□□ -1.17
SS18-205ENST00000542420 A0A1W2PRF3 423 aa7.75□□□□□ -1.17
SS18-205ENST00000542420 A0A1W2PRM7 423 aa7.75□□□□□ -1.17
SS18-205ENST00000542420 GATD1Q8NB37 220 aa7.75□□□□□ -1.17
SS18-205ENST00000542420 IGHV7-81A0A0B4J1V7 117 aa7.75□□□□□ -1.17
SS18-205ENST00000542420 BRI3O95415 125 aa7.75□□□□□ -1.17
SS18-205ENST00000542420 P01737 135 aa7.75□□□□□ -1.17
SS18-205ENST00000542420 APCSP02743 223 aa7.75□□□□□ -1.17
SS18-205ENST00000542420 RPL7P18124 248 aaKnown RBP7.75□□□□□ -1.17
SS18-205ENST00000542420 GNG5P63218 68 aa7.75□□□□□ -1.17
SS18-205ENST00000542420 Q6AWC8 147 aa7.75□□□□□ -1.17
SS18-205ENST00000542420 UNQ5815/PRO19632Q6UWF5 114 aa7.75□□□□□ -1.17
SS18-205ENST00000542420 SIGLEC15Q6ZMC9 328 aa7.75□□□□□ -1.17
SS18-205ENST00000542420 C19orf35Q6ZS72 473 aa7.75□□□□□ -1.17
SS18-205ENST00000542420 BAGE3Q86Y29 109 aa7.75□□□□□ -1.17
SS18-205ENST00000542420 NUP35Q8NFH5 326 aa7.75□□□□□ -1.17
SS18-205ENST00000542420 OR2D3Q8NGH3 330 aa7.75□□□□□ -1.17
SS18-205ENST00000542420 DAZAP1Q96EP5 407 aaKnown RBP7.75□□□□□ -1.17
SS18-205ENST00000542420 VAMP8Q9BV40 100 aa7.75□□□□□ -1.17
SS18-205ENST00000542420 RNF114Q9Y508 228 aa7.75□□□□□ -1.17
SS18-205ENST00000542420 ABCA4P78363 2273 aa7.75□□□□□ -1.17
SS18-205ENST00000542420 SPTBN2O15020 2390 aa7.75□□□□□ -1.17
SS18-205ENST00000542420 F8W735 103 aaPredicted RBP7.74□□□□□ -1.17
SS18-205ENST00000542420 IL4P05112 153 aa7.74□□□□□ -1.17
SS18-205ENST00000542420 EGR2P11161 476 aaPredicted RBP7.74□□□□□ -1.17
SS18-205ENST00000542420 FBLN7Q53RD9 439 aa7.74□□□□□ -1.17
SS18-205ENST00000542420 DYNAPQ8N1N2 210 aa7.74□□□□□ -1.17
SS18-205ENST00000542420 AJUBAQ96IF1 538 aa7.74□□□□□ -1.17
SS18-205ENST00000542420 ZNF414Q96IQ9 312 aa7.74□□□□□ -1.17
SS18-205ENST00000542420 KCNS1Q96KK3 526 aa7.74□□□□□ -1.17
SS18-205ENST00000542420 LINC00479Q96M42 142 aa7.74□□□□□ -1.17
SS18-205ENST00000542420 LAMTOR2Q9Y2Q5 125 aa7.74□□□□□ -1.17
SS18-205ENST00000542420 CEP295Q9C0D2 2601 aa7.74□□□□□ -1.17
SS18-205ENST00000542420 IGHV3-21A0A0B4J1V1 117 aa7.74□□□□□ -1.17
SS18-205ENST00000542420 TRAV34A0A0B4J273 112 aa7.74□□□□□ -1.17
SS18-205ENST00000542420 BMPR1BO00238 502 aa7.74□□□□□ -1.17
SS18-205ENST00000542420 IGLV2-11P01706 119 aa7.74□□□□□ -1.17
SS18-205ENST00000542420 PRB3Q04118 309 aaPredicted RBP7.74□□□□□ -1.17
SS18-205ENST00000542420 PAX8Q06710 450 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms