RNA–Protein interactions for RNA: ENST00000542367.1

CCND1-205, Transcript of cyclin D1, humanhuman

TSL 1 (best)

Gene CCND1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-205ENST00000542367 ZNF846Q147U1 533 aa11.83□□□□□ -0.52
CCND1-205ENST00000542367 FAM78BQ5VT40 261 aa11.83□□□□□ -0.52
CCND1-205ENST00000542367 LGALS9CQ6DKI2 356 aa11.83□□□□□ -0.52
CCND1-205ENST00000542367 Q6ZTC4 211 aa11.83□□□□□ -0.52
CCND1-205ENST00000542367 ZNF709Q8N972 641 aa11.83□□□□□ -0.52
CCND1-205ENST00000542367 ZNF431Q8TF32 576 aaPredicted RBP11.83□□□□□ -0.52
CCND1-205ENST00000542367 SLC35B3Q9H1N7 401 aa11.83□□□□□ -0.52
CCND1-205ENST00000542367 NUDT15Q9NV35 164 aa11.83□□□□□ -0.52
CCND1-205ENST00000542367 MGAT4CQ9UBM8 478 aa11.83□□□□□ -0.52
CCND1-205ENST00000542367 IGHV3OR16-12A0A075B7B8 117 aa11.82□□□□□ -0.52
CCND1-205ENST00000542367 A0A0J9YX75 114 aa11.82□□□□□ -0.52
CCND1-205ENST00000542367 IGLL5B9A064 214 aa11.82□□□□□ -0.52
CCND1-205ENST00000542367 L7N2F9 121 aa11.82□□□□□ -0.52
CCND1-205ENST00000542367 H2AFB2P0C5Z0 115 aa11.82□□□□□ -0.52
CCND1-205ENST00000542367 OR5G3P0C626 314 aa11.82□□□□□ -0.52
CCND1-205ENST00000542367 VAMP2P63027 116 aa11.82□□□□□ -0.52
CCND1-205ENST00000542367 PSG9Q00887 426 aa11.82□□□□□ -0.52
CCND1-205ENST00000542367 SLC38A11Q08AI6 406 aa11.82□□□□□ -0.52
CCND1-205ENST00000542367 IGFL4Q6B9Z1 124 aa11.82□□□□□ -0.52
CCND1-205ENST00000542367 TEPPQ6URK8 271 aa11.82□□□□□ -0.52
CCND1-205ENST00000542367 ZNF705AQ6ZN79 300 aaPredicted RBP11.82□□□□□ -0.52
CCND1-205ENST00000542367 SHANK2-AS3Q9BTD1 123 aa11.82□□□□□ -0.52
CCND1-205ENST00000542367 CELA1Q9UNI1 258 aa11.82□□□□□ -0.52
CCND1-205ENST00000542367 C5orf51A6NDU8 294 aa11.81□□□□□ -0.52
CCND1-205ENST00000542367 TCTAP57738 103 aa11.81□□□□□ -0.52
CCND1-205ENST00000542367 FGL1Q08830 312 aa11.81□□□□□ -0.52
CCND1-205ENST00000542367 LINC00299Q6ZSB3 139 aa11.81□□□□□ -0.52
CCND1-205ENST00000542367 ZNF767PQ75MW2 155 aa11.81□□□□□ -0.52
CCND1-205ENST00000542367 C12orf45Q8N5I9 185 aaPredicted RBP11.81□□□□□ -0.52
CCND1-205ENST00000542367 UHRF2Q96PU4 802 aa11.81□□□□□ -0.52
CCND1-205ENST00000542367 NEU1Q99519 415 aa11.81□□□□□ -0.52
CCND1-205ENST00000542367 ARL6Q9H0F7 186 aa11.81□□□□□ -0.52
CCND1-205ENST00000542367 LSM5Q9Y4Y9 91 aaKnown RBP11.81□□□□□ -0.52
CCND1-205ENST00000542367 VPS13DQ5THJ4 4388 aa11.8□□□□□ -0.52
CCND1-205ENST00000542367 TRAV10A0A0B4J240 114 aa11.8□□□□□ -0.52
CCND1-205ENST00000542367 FAM240BA0A1B0GVZ2 78 aa11.8□□□□□ -0.52
CCND1-205ENST00000542367 SMIM9A6NGZ8 99 aa11.8□□□□□ -0.52
CCND1-205ENST00000542367 ZNF705FA8MVS1 300 aaPredicted RBP11.8□□□□□ -0.52
CCND1-205ENST00000542367 K7EPK0 472 aa11.8□□□□□ -0.52
CCND1-205ENST00000542367 ZNF705DP0CH99 300 aaPredicted RBP11.8□□□□□ -0.52
CCND1-205ENST00000542367 ZNF705BP0CI00 300 aaPredicted RBP11.8□□□□□ -0.52
CCND1-205ENST00000542367 RPL7P18124 248 aaKnown RBP11.8□□□□□ -0.52
CCND1-205ENST00000542367 C12orf74Q32Q52 190 aa11.8□□□□□ -0.52
CCND1-205ENST00000542367 PATE2Q6UY27 113 aa11.8□□□□□ -0.52
CCND1-205ENST00000542367 RPP25LQ8N5L8 163 aaKnown RBP11.8□□□□□ -0.52
CCND1-205ENST00000542367 GGACTQ9BVM4 153 aa11.8□□□□□ -0.52
CCND1-205ENST00000542367 APLNQ9ULZ1 77 aa11.8□□□□□ -0.52
CCND1-205ENST00000542367 TRAV8-2A0A0B4J237 113 aa11.79□□□□□ -0.52
CCND1-205ENST00000542367 GOSR2O14653 212 aa11.79□□□□□ -0.52
CCND1-205ENST00000542367 AGPAT2O15120 278 aa11.79□□□□□ -0.52
CCND1-205ENST00000542367 DEDDO75618 318 aa11.79□□□□□ -0.52
CCND1-205ENST00000542367 BCAP31P51572 246 aa11.79□□□□□ -0.52
CCND1-205ENST00000542367 MZT2BQ6NZ67 158 aa11.79□□□□□ -0.52
CCND1-205ENST00000542367 S100A7AQ86SG5 101 aa11.79□□□□□ -0.52
CCND1-205ENST00000542367 RNF182Q8N6D2 247 aa11.79□□□□□ -0.52
CCND1-205ENST00000542367 S100ZQ8WXG8 99 aa11.79□□□□□ -0.52
CCND1-205ENST00000542367 C2orf50Q96LR7 162 aa11.79□□□□□ -0.52
CCND1-205ENST00000542367 ARV1Q9H2C2 271 aa11.79□□□□□ -0.52
CCND1-205ENST00000542367 EMP1P54849 157 aa11.78□□□□□ -0.52
CCND1-205ENST00000542367 ZNF546Q86UE3 836 aa11.78□□□□□ -0.52
CCND1-205ENST00000542367 C1orf158Q8N1D5 194 aa11.78□□□□□ -0.52
CCND1-205ENST00000542367 GOLT1BQ9Y3E0 138 aa11.78□□□□□ -0.52
CCND1-205ENST00000542367 DEFB131BA0A096LNP1 70 aa11.77□□□□□ -0.53
CCND1-205ENST00000542367 FAM24AA6NFZ4 105 aa11.77□□□□□ -0.53
CCND1-205ENST00000542367 A8MTW9 85 aa11.77□□□□□ -0.53
CCND1-205ENST00000542367 CST7O76096 145 aa11.77□□□□□ -0.53
CCND1-205ENST00000542367 DUSP14O95147 198 aaKnown RBP11.77□□□□□ -0.53
CCND1-205ENST00000542367 CAV2P51636 162 aa11.77□□□□□ -0.53
CCND1-205ENST00000542367 CNN1P51911 297 aaKnown RBP11.77□□□□□ -0.53
CCND1-205ENST00000542367 PXDC1Q5TGL8 231 aa11.77□□□□□ -0.53
CCND1-205ENST00000542367 AMTNQ6UX39 209 aa11.77□□□□□ -0.53
CCND1-205ENST00000542367 MGST2Q99735 147 aa11.77□□□□□ -0.53
CCND1-205ENST00000542367 C11orf1Q9H5F2 150 aa11.77□□□□□ -0.53
CCND1-205ENST00000542367 RFNGQ9Y644 331 aa11.77□□□□□ -0.53
CCND1-205ENST00000542367 IGHV4-4A0A075B6R2 117 aa11.76□□□□□ -0.53
CCND1-205ENST00000542367 A0A087X0K7 114 aa11.76□□□□□ -0.53
CCND1-205ENST00000542367 TMEM189A5PLL7 270 aa11.76□□□□□ -0.53
CCND1-205ENST00000542367 SPART-AS1P0CW21 52 aa11.76□□□□□ -0.53
CCND1-205ENST00000542367 PRR20EP86478 221 aa11.76□□□□□ -0.53
CCND1-205ENST00000542367 PRR20CP86479 221 aa11.76□□□□□ -0.53
CCND1-205ENST00000542367 PRR20DP86480 221 aa11.76□□□□□ -0.53
CCND1-205ENST00000542367 PRR20BP86481 221 aa11.76□□□□□ -0.53
CCND1-205ENST00000542367 PRR20AP86496 221 aa11.76□□□□□ -0.53
CCND1-205ENST00000542367 ASAH1Q13510 395 aa11.76□□□□□ -0.53
CCND1-205ENST00000542367 LINC00305Q7Z4B0 112 aa11.76□□□□□ -0.53
CCND1-205ENST00000542367 ZNF738Q8NE65 137 aa11.76□□□□□ -0.53
CCND1-205ENST00000542367 OR11H7Q8NGC8 314 aa11.76□□□□□ -0.53
CCND1-205ENST00000542367 LRRC20Q8TCA0 184 aa11.76□□□□□ -0.53
CCND1-205ENST00000542367 RNF24Q9Y225 148 aa11.76□□□□□ -0.53
CCND1-205ENST00000542367 MRPS12O15235 138 aaKnown RBP11.75□□□□□ -0.53
CCND1-205ENST00000542367 PVALBP20472 110 aaPredicted RBP11.75□□□□□ -0.53
CCND1-205ENST00000542367 S100A10P60903 97 aa11.75□□□□□ -0.53
CCND1-205ENST00000542367 IL15RAQ13261 267 aa11.75□□□□□ -0.53
CCND1-205ENST00000542367 TMEM37Q8WXS4 190 aa11.75□□□□□ -0.53
CCND1-205ENST00000542367 IGF2BP2-AS1Q96M15 143 aa11.75□□□□□ -0.53
CCND1-205ENST00000542367 RNF126Q9BV68 326 aa11.75□□□□□ -0.53
CCND1-205ENST00000542367 A6NHS1 94 aa11.74□□□□□ -0.53
CCND1-205ENST00000542367 M0R2Z0 102 aa11.74□□□□□ -0.53
CCND1-205ENST00000542367 COX7A2P2O60397 106 aa11.74□□□□□ -0.53
CCND1-205ENST00000542367 HBE1P02100 147 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms