RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 PKD1L1Q8TDX9 2849 aa7.08□□□□□ -1.28
DDX55-208ENST00000541259 SCO2A0A1W2PP80 73 aa7.07□□□□□ -1.28
DDX55-208ENST00000541259 ZNF98A6NK75 572 aa7.07□□□□□ -1.28
DDX55-208ENST00000541259 CHEK1O14757 476 aa7.07□□□□□ -1.28
DDX55-208ENST00000541259 HMGB3O15347 200 aaKnown RBP7.07□□□□□ -1.28
DDX55-208ENST00000541259 BUB3O43684 328 aa7.07□□□□□ -1.28
DDX55-208ENST00000541259 MBP02144 154 aa7.07□□□□□ -1.28
DDX55-208ENST00000541259 C8orf88P0DMB2 117 aa7.07□□□□□ -1.28
DDX55-208ENST00000541259 ANKRD39Q53RE8 183 aa7.07□□□□□ -1.28
DDX55-208ENST00000541259 TEX261Q6UWH6 196 aa7.07□□□□□ -1.28
DDX55-208ENST00000541259 PFDN5Q99471 154 aa7.07□□□□□ -1.28
DDX55-208ENST00000541259 SHANK2-AS3Q9BTD1 123 aa7.07□□□□□ -1.28
DDX55-208ENST00000541259 ELOVL1Q9BW60 279 aa7.07□□□□□ -1.28
DDX55-208ENST00000541259 RHPN1-AS1Q9BWJ2 59 aa7.07□□□□□ -1.28
DDX55-208ENST00000541259 SLC25A22Q9H936 323 aa7.07□□□□□ -1.28
DDX55-208ENST00000541259 PEMTQ9UBM1 199 aa7.07□□□□□ -1.28
DDX55-208ENST00000541259 MLXQ9UH92 298 aa7.07□□□□□ -1.28
DDX55-208ENST00000541259 FUT9Q9Y231 359 aa7.07□□□□□ -1.28
DDX55-208ENST00000541259 DNHD1Q96M86 4753 aa7.06□□□□□ -1.28
DDX55-208ENST00000541259 A0A1W2PPV4 95 aa7.06□□□□□ -1.28
DDX55-208ENST00000541259 SEC14L6B5MCN3 397 aa7.06□□□□□ -1.28
DDX55-208ENST00000541259 SNRPCP09234 159 aaKnown RBP7.06□□□□□ -1.28
DDX55-208ENST00000541259 SULT1A2P50226 295 aa7.06□□□□□ -1.28
DDX55-208ENST00000541259 RHOBP62745 196 aa7.06□□□□□ -1.28
DDX55-208ENST00000541259 KRTAP21-3Q3LHN1 58 aa7.06□□□□□ -1.28
DDX55-208ENST00000541259 EIF5AL1Q6IS14 154 aaKnown RBP7.06□□□□□ -1.28
DDX55-208ENST00000541259 C16orf54Q6UWD8 224 aa7.06□□□□□ -1.28
DDX55-208ENST00000541259 ZNF680Q8NEM1 530 aa7.06□□□□□ -1.28
DDX55-208ENST00000541259 FAM213BQ8TBF2 198 aa7.06□□□□□ -1.28
DDX55-208ENST00000541259 PCNPQ8WW12 178 aaKnown RBP7.06□□□□□ -1.28
DDX55-208ENST00000541259 RAB24Q969Q5 203 aa7.06□□□□□ -1.28
DDX55-208ENST00000541259 PHYHIPLQ96FC7 376 aa7.06□□□□□ -1.28
DDX55-208ENST00000541259 FAM167A-AS1Q96KT0 104 aa7.06□□□□□ -1.28
DDX55-208ENST00000541259 RNF2Q99496 336 aa7.06□□□□□ -1.28
DDX55-208ENST00000541259 SLC25A2Q9BXI2 301 aa7.06□□□□□ -1.28
DDX55-208ENST00000541259 ACTR3CQ9C0K3 210 aaPredicted RBP7.06□□□□□ -1.28
DDX55-208ENST00000541259 SMAD5-AS1Q9Y6J3 95 aa7.06□□□□□ -1.28
DDX55-208ENST00000541259 UMAD1C9J7I0 102 aa7.05□□□□□ -1.28
DDX55-208ENST00000541259 SAP30O75446 220 aa7.05□□□□□ -1.28
DDX55-208ENST00000541259 PYYP10082 97 aa7.05□□□□□ -1.28
DDX55-208ENST00000541259 CDC34P49427 236 aaPredicted RBP7.05□□□□□ -1.28
DDX55-208ENST00000541259 FGF8P55075 233 aaPredicted RBP7.05□□□□□ -1.28
DDX55-208ENST00000541259 LCN15Q6UWW0 184 aa7.05□□□□□ -1.28
DDX55-208ENST00000541259 WFDC9Q8NEX5 89 aa7.05□□□□□ -1.28
DDX55-208ENST00000541259 GLMPQ8WWB7 406 aa7.05□□□□□ -1.28
DDX55-208ENST00000541259 ZNF503Q96F45 646 aa7.05□□□□□ -1.28
DDX55-208ENST00000541259 C17orf77Q96MU5 243 aa7.05□□□□□ -1.28
DDX55-208ENST00000541259 MRPL32Q9BYC8 188 aaKnown RBP7.05□□□□□ -1.28
DDX55-208ENST00000541259 DNAH3Q8TD57 4116 aa7.04□□□□□ -1.28
DDX55-208ENST00000541259 IGKV3-7A0A075B6H7 116 aa7.04□□□□□ -1.28
DDX55-208ENST00000541259 CTXND1A0A1B0GTU2 59 aa7.04□□□□□ -1.28
DDX55-208ENST00000541259 A0A1B0GV50 99 aa7.04□□□□□ -1.28
DDX55-208ENST00000541259 A0A1W2PS18 150 aa7.04□□□□□ -1.28
DDX55-208ENST00000541259 IZUMO1RA6ND01 250 aa7.04□□□□□ -1.28
DDX55-208ENST00000541259 H3BTX0 84 aa7.04□□□□□ -1.28
DDX55-208ENST00000541259 MRPS12O15235 138 aaKnown RBP7.04□□□□□ -1.28
DDX55-208ENST00000541259 STAG3L2P0CL84 134 aa7.04□□□□□ -1.28
DDX55-208ENST00000541259 STAG3L3P0CL85 134 aa7.04□□□□□ -1.28
DDX55-208ENST00000541259 IGLL1P15814 213 aa7.04□□□□□ -1.28
DDX55-208ENST00000541259 DEFB114Q30KQ6 69 aa7.04□□□□□ -1.28
DDX55-208ENST00000541259 FAM90A2PQ658T7 463 aa7.04□□□□□ -1.28
DDX55-208ENST00000541259 TCF24Q7RTU0 167 aa7.04□□□□□ -1.28
DDX55-208ENST00000541259 OR8I2Q8N0Y5 310 aa7.04□□□□□ -1.28
DDX55-208ENST00000541259 MARC2Q969Z3 335 aa7.04□□□□□ -1.28
DDX55-208ENST00000541259 NARS2Q96I59 477 aaKnown RBP7.04□□□□□ -1.28
DDX55-208ENST00000541259 TECRQ9NZ01 308 aaKnown RBP7.04□□□□□ -1.28
DDX55-208ENST00000541259 ZNF705EA8MWA4 302 aaPredicted RBP7.03□□□□□ -1.28
DDX55-208ENST00000541259 H3BQ15 152 aa7.03□□□□□ -1.28
DDX55-208ENST00000541259 OR7C2O60412 319 aa7.03□□□□□ -1.28
DDX55-208ENST00000541259 IFNA7P01567 189 aa7.03□□□□□ -1.28
DDX55-208ENST00000541259 OR10J4P0C629 311 aa7.03□□□□□ -1.28
DDX55-208ENST00000541259 ARL14EPLP0DKL9 152 aa7.03□□□□□ -1.28
DDX55-208ENST00000541259 GP9P14770 177 aa7.03□□□□□ -1.28
DDX55-208ENST00000541259 RAB5CP51148 216 aa7.03□□□□□ -1.28
DDX55-208ENST00000541259 CCL20P78556 96 aa7.03□□□□□ -1.28
DDX55-208ENST00000541259 CD300EQ496F6 205 aaPredicted RBP7.03□□□□□ -1.28
DDX55-208ENST00000541259 C1orf194Q5T5A4 169 aa7.03□□□□□ -1.28
DDX55-208ENST00000541259 DPPA3Q6W0C5 159 aa7.03□□□□□ -1.28
DDX55-208ENST00000541259 SIGLEC15Q6ZMC9 328 aa7.03□□□□□ -1.28
DDX55-208ENST00000541259 GBGT1Q8N5D6 347 aa7.03□□□□□ -1.28
DDX55-208ENST00000541259 DYNLRB2Q8TF09 96 aa7.03□□□□□ -1.28
DDX55-208ENST00000541259 MBD3L1Q8WWY6 194 aa7.03□□□□□ -1.28
DDX55-208ENST00000541259 GRAMD2BQ96HH9 432 aa7.03□□□□□ -1.28
DDX55-208ENST00000541259 PAXXQ9BUH6 204 aa7.03□□□□□ -1.28
DDX55-208ENST00000541259 OR51M1Q9H341 326 aa7.03□□□□□ -1.28
DDX55-208ENST00000541259 TMPRSS5Q9H3S3 457 aa7.03□□□□□ -1.28
DDX55-208ENST00000541259 ZNF586Q9NXT0 402 aa7.03□□□□□ -1.28
DDX55-208ENST00000541259 SIGLEC8Q9NYZ4 499 aa7.03□□□□□ -1.28
DDX55-208ENST00000541259 UBQLN2Q9UHD9 624 aa7.03□□□□□ -1.28
DDX55-208ENST00000541259 PFDN2Q9UHV9 154 aa7.03□□□□□ -1.28
DDX55-208ENST00000541259 AGRNO00468 2067 aa7.03□□□□□ -1.28
DDX55-208ENST00000541259 MAP1LC3B2A6NCE7 125 aa7.02□□□□□ -1.29
DDX55-208ENST00000541259 IGLV1-51P01701 117 aa7.02□□□□□ -1.29
DDX55-208ENST00000541259 GCHFRP30047 84 aa7.02□□□□□ -1.29
DDX55-208ENST00000541259 S100A7P31151 101 aa7.02□□□□□ -1.29
DDX55-208ENST00000541259 TAS2R45P59539 299 aa7.02□□□□□ -1.29
DDX55-208ENST00000541259 RPL11P62913 178 aaKnown RBP7.02□□□□□ -1.29
DDX55-208ENST00000541259 KHDC3LQ587J8 217 aa7.02□□□□□ -1.29
DDX55-208ENST00000541259 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.02□□□□□ -1.29
DDX55-208ENST00000541259 S100A7AQ86SG5 101 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms