RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 ETV2O00321 342 aaPredicted RBP12.2□□□□□ -0.46
SMARCA4-207ENST00000541122 C5orf24Q7Z6I8 188 aa12.2□□□□□ -0.46
SMARCA4-207ENST00000541122 A0A1W2PPM0 123 aa12.2□□□□□ -0.46
SMARCA4-207ENST00000541122 PRSS46E5RG02 174 aa12.2□□□□□ -0.46
SMARCA4-207ENST00000541122 ARMS2P0C7Q2 107 aa12.2□□□□□ -0.46
SMARCA4-207ENST00000541122 CFHR1Q03591 330 aa12.2□□□□□ -0.46
SMARCA4-207ENST00000541122 PAX8Q06710 450 aa12.2□□□□□ -0.46
SMARCA4-207ENST00000541122 CSRP2Q16527 193 aa12.2□□□□□ -0.46
SMARCA4-207ENST00000541122 BVES-AS1Q5T3Y7 98 aa12.2□□□□□ -0.46
SMARCA4-207ENST00000541122 TMEM86BQ8N661 226 aa12.2□□□□□ -0.46
SMARCA4-207ENST00000541122 LINC00477Q96M19 166 aa12.2□□□□□ -0.46
SMARCA4-207ENST00000541122 NPFFR1Q9GZQ6 430 aa12.2□□□□□ -0.46
SMARCA4-207ENST00000541122 SELENOKQ9Y6D0 94 aa12.2□□□□□ -0.46
SMARCA4-207ENST00000541122 DOCK6Q96HP0 2047 aa12.19□□□□□ -0.46
SMARCA4-207ENST00000541122 CACNA1DQ01668 2161 aa12.19□□□□□ -0.46
SMARCA4-207ENST00000541122 HAX1O00165 279 aa12.19□□□□□ -0.46
SMARCA4-207ENST00000541122 SP9P0CG40 484 aa12.19□□□□□ -0.46
SMARCA4-207ENST00000541122 PYGO2Q9BRQ0 406 aa12.19□□□□□ -0.46
SMARCA4-207ENST00000541122 FOXG1P55316 489 aaPredicted RBP12.19□□□□□ -0.46
SMARCA4-207ENST00000541122 FAM104BQ5XKR9 115 aa12.19□□□□□ -0.46
SMARCA4-207ENST00000541122 PRR19A6NJB7 356 aa12.19□□□□□ -0.46
SMARCA4-207ENST00000541122 IGHV1-8P0DP01 117 aa12.19□□□□□ -0.46
SMARCA4-207ENST00000541122 FXYD7P58549 80 aa12.19□□□□□ -0.46
SMARCA4-207ENST00000541122 SHANK2-AS3Q9BTD1 123 aa12.19□□□□□ -0.46
SMARCA4-207ENST00000541122 C9JAW5 83 aa12.19□□□□□ -0.46
SMARCA4-207ENST00000541122 ARTNQ5T4W7 220 aa12.19□□□□□ -0.46
SMARCA4-207ENST00000541122 PLXNA3P51805 1871 aa12.18□□□□□ -0.46
SMARCA4-207ENST00000541122 TMEM8BA6NDV4 472 aa12.18□□□□□ -0.46
SMARCA4-207ENST00000541122 PLAURQ03405 335 aa12.18□□□□□ -0.46
SMARCA4-207ENST00000541122 ZFP36L1Q07352 338 aaKnown RBP12.18□□□□□ -0.46
SMARCA4-207ENST00000541122 ABHD17AQ96GS6 310 aa12.18□□□□□ -0.46
SMARCA4-207ENST00000541122 MCRIP2Q9BUT9 160 aaKnown RBP12.18□□□□□ -0.46
SMARCA4-207ENST00000541122 LTBP1Q14766 1721 aa12.18□□□□□ -0.46
SMARCA4-207ENST00000541122 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.18□□□□□ -0.46
SMARCA4-207ENST00000541122 ZCCHC24Q8N2G6 241 aaKnown RBP12.18□□□□□ -0.46
SMARCA4-207ENST00000541122 SPRR3Q9UBC9 169 aa12.18□□□□□ -0.46
SMARCA4-207ENST00000541122 IL18BPO95998 194 aa12.18□□□□□ -0.46
SMARCA4-207ENST00000541122 RPL15P61313 204 aaKnown RBP12.18□□□□□ -0.46
SMARCA4-207ENST00000541122 TMEM14BQ9NUH8 114 aa12.18□□□□□ -0.46
SMARCA4-207ENST00000541122 AHCTF1Q8WYP5 2266 aa12.18□□□□□ -0.46
SMARCA4-207ENST00000541122 IGHV1-3A0A0C4DH29 117 aa12.18□□□□□ -0.46
SMARCA4-207ENST00000541122 COLCA1Q6ZS62 124 aa12.18□□□□□ -0.46
SMARCA4-207ENST00000541122 RASL10AQ92737 203 aa12.18□□□□□ -0.46
SMARCA4-207ENST00000541122 PEMTQ9UBM1 199 aa12.18□□□□□ -0.46
SMARCA4-207ENST00000541122 LINC01560Q8TB33 94 aa12.17□□□□□ -0.46
SMARCA4-207ENST00000541122 CYYR1Q96J86 154 aa12.17□□□□□ -0.46
SMARCA4-207ENST00000541122 LINC00479Q96M42 142 aa12.17□□□□□ -0.46
SMARCA4-207ENST00000541122 METRNQ9UJH8 293 aa12.17□□□□□ -0.46
SMARCA4-207ENST00000541122 CASP8AP2Q9UKL3 1982 aa12.17□□□□□ -0.46
SMARCA4-207ENST00000541122 IGLC7A0M8Q6 106 aa12.17□□□□□ -0.46
SMARCA4-207ENST00000541122 GAGE12HA6NDE8 117 aa12.17□□□□□ -0.46
SMARCA4-207ENST00000541122 CRPP02741 224 aa12.17□□□□□ -0.46
SMARCA4-207ENST00000541122 PRR31Q5SQ13 230 aa12.17□□□□□ -0.46
SMARCA4-207ENST00000541122 TMEM200BQ69YZ2 307 aa12.17□□□□□ -0.46
SMARCA4-207ENST00000541122 Q8N8P6 123 aa12.17□□□□□ -0.46
SMARCA4-207ENST00000541122 RSPO3Q9BXY4 272 aaPredicted RBP12.17□□□□□ -0.46
SMARCA4-207ENST00000541122 PLSCR4Q9NRQ2 329 aa12.17□□□□□ -0.46
SMARCA4-207ENST00000541122 WDR90Q96KV7 1748 aa12.17□□□□□ -0.46
SMARCA4-207ENST00000541122 GLMPQ8WWB7 406 aa12.17□□□□□ -0.46
SMARCA4-207ENST00000541122 ZNF48Q96MX3 618 aaPredicted RBP12.17□□□□□ -0.46
SMARCA4-207ENST00000541122 SNRNP200O75643 2136 aaKnown RBP12.16□□□□□ -0.46
SMARCA4-207ENST00000541122 TRAV40A0A0B4J280 105 aa12.16□□□□□ -0.46
SMARCA4-207ENST00000541122 LMO1P25800 156 aa12.16□□□□□ -0.46
SMARCA4-207ENST00000541122 BOD1L2Q8IYS8 172 aa12.16□□□□□ -0.46
SMARCA4-207ENST00000541122 CSTL1Q9H114 145 aa12.16□□□□□ -0.46
SMARCA4-207ENST00000541122 IGHV3-64A0A075B6Q5 118 aa12.16□□□□□ -0.46
SMARCA4-207ENST00000541122 MYMXA0A1B0GTQ4 84 aa12.16□□□□□ -0.46
SMARCA4-207ENST00000541122 OR11H6Q8NGC7 330 aa12.16□□□□□ -0.46
SMARCA4-207ENST00000541122 WIPF2Q8TF74 440 aaPredicted RBP12.16□□□□□ -0.46
SMARCA4-207ENST00000541122 H3BMM0 161 aa12.16□□□□□ -0.46
SMARCA4-207ENST00000541122 ITLN2Q8WWU7 325 aaPredicted RBP12.16□□□□□ -0.46
SMARCA4-207ENST00000541122 UBE2WQ96B02 151 aa12.16□□□□□ -0.46
SMARCA4-207ENST00000541122 IGKV3D-20A0A0C4DH25 116 aa12.15□□□□□ -0.46
SMARCA4-207ENST00000541122 ATP5J2P56134 94 aa12.15□□□□□ -0.46
SMARCA4-207ENST00000541122 LHFPL4Q7Z7J7 247 aa12.15□□□□□ -0.46
SMARCA4-207ENST00000541122 SIGLEC9Q9Y336 463 aa12.15□□□□□ -0.46
SMARCA4-207ENST00000541122 SMKR1H3BMG3 65 aa12.15□□□□□ -0.46
SMARCA4-207ENST00000541122 B3GALT5-AS1P59052 145 aa12.15□□□□□ -0.46
SMARCA4-207ENST00000541122 ETDBQ3ZM63 59 aa12.15□□□□□ -0.46
SMARCA4-207ENST00000541122 E9PLN8 166 aa12.15□□□□□ -0.46
SMARCA4-207ENST00000541122 SELLP14151 372 aa12.15□□□□□ -0.46
SMARCA4-207ENST00000541122 KLF5Q13887 457 aaPredicted RBP12.15□□□□□ -0.46
SMARCA4-207ENST00000541122 GAFA1Q96PS6 74 aa12.15□□□□□ -0.46
SMARCA4-207ENST00000541122 IGKV1-39P01597 117 aa12.15□□□□□ -0.47
SMARCA4-207ENST00000541122 IGKV1D-39P04432 117 aa12.15□□□□□ -0.47
SMARCA4-207ENST00000541122 SPACA3Q8IXA5 215 aa12.15□□□□□ -0.47
SMARCA4-207ENST00000541122 SVILO95425 2214 aa12.14□□□□□ -0.47
SMARCA4-207ENST00000541122 IGKV1D-17A0A075B6S4 117 aa12.14□□□□□ -0.47
SMARCA4-207ENST00000541122 IGHV3-11P01762 117 aa12.14□□□□□ -0.47
SMARCA4-207ENST00000541122 C9orf153Q5TBE3 101 aa12.14□□□□□ -0.47
SMARCA4-207ENST00000541122 LRRK1Q38SD2 2015 aa12.14□□□□□ -0.47
SMARCA4-207ENST00000541122 ZNF114Q8NC26 417 aa12.14□□□□□ -0.47
SMARCA4-207ENST00000541122 Q8TAT8 98 aa12.14□□□□□ -0.47
SMARCA4-207ENST00000541122 RNASE6Q93091 150 aaKnown RBP12.14□□□□□ -0.47
SMARCA4-207ENST00000541122 SPANXCQ9NY87 97 aa12.14□□□□□ -0.47
SMARCA4-207ENST00000541122 IGHV3OR16-10A0A075B7F0 116 aa12.14□□□□□ -0.47
SMARCA4-207ENST00000541122 NTN3O00634 580 aaPredicted RBP12.14□□□□□ -0.47
SMARCA4-207ENST00000541122 C15orf32Q32M92 178 aa12.14□□□□□ -0.47
SMARCA4-207ENST00000541122 MINOS1Q5TGZ0 78 aa12.14□□□□□ -0.47
SMARCA4-207ENST00000541122 TMEM141Q96I45 108 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms