RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 MRPS12O15235 138 aaKnown RBP18.91■□□□□ 0.62
TTC3-225ENST00000540756 RPLP1P05386 114 aaKnown RBP18.91■□□□□ 0.62
TTC3-225ENST00000540756 Q8N2B8 174 aa18.91■□□□□ 0.62
TTC3-225ENST00000540756 AURKAIP1Q9NWT8 199 aaPredicted RBP18.91■□□□□ 0.62
TTC3-225ENST00000540756 TMEM14CQ9P0S9 112 aa18.91■□□□□ 0.62
TTC3-225ENST00000540756 TRBV20OR9-2A0A075B6H5 130 aa18.9■□□□□ 0.62
TTC3-225ENST00000540756 NDUFS6O75380 124 aaKnown RBP18.9■□□□□ 0.62
TTC3-225ENST00000540756 IGHV3OR16-13A0A075B7E8 117 aa18.9■□□□□ 0.62
TTC3-225ENST00000540756 IGHV3-74A0A0B4J1X5 117 aa18.9■□□□□ 0.62
TTC3-225ENST00000540756 BMPR1BO00238 502 aa18.9■□□□□ 0.62
TTC3-225ENST00000540756 IGHV3-49A0A0A0MS15 119 aa18.89■□□□□ 0.61
TTC3-225ENST00000540756 IGHV3-66A0A0C4DH42 116 aa18.89■□□□□ 0.61
TTC3-225ENST00000540756 APOHP02749 345 aaPredicted RBP18.89■□□□□ 0.61
TTC3-225ENST00000540756 MYCNOSP40205 109 aa18.89■□□□□ 0.61
TTC3-225ENST00000540756 TMEM241Q24JQ0 296 aa18.89■□□□□ 0.61
TTC3-225ENST00000540756 UNQ9165/PRO28630Q6UXU0 137 aa18.89■□□□□ 0.61
TTC3-225ENST00000540756 BPIFA4PQ86YQ2 179 aa18.89■□□□□ 0.61
TTC3-225ENST00000540756 A0A0G2JLM5 398 aa18.88■□□□□ 0.61
TTC3-225ENST00000540756 IGLC2P0DOY2 106 aa18.88■□□□□ 0.61
TTC3-225ENST00000540756 C11orf52Q96A22 123 aa18.88■□□□□ 0.61
TTC3-225ENST00000540756 ATP6V0BQ99437 205 aa18.88■□□□□ 0.61
TTC3-225ENST00000540756 NAT8Q9UHE5 227 aa18.88■□□□□ 0.61
TTC3-225ENST00000540756 PRB4P10163 310 aaPredicted RBP18.88■□□□□ 0.61
TTC3-225ENST00000540756 HIST1H1EP10412 219 aaKnown RBP18.88■□□□□ 0.61
TTC3-225ENST00000540756 GNG5P63218 68 aa18.88■□□□□ 0.61
TTC3-225ENST00000540756 RELQ04864 619 aaPredicted RBP18.88■□□□□ 0.61
TTC3-225ENST00000540756 LINC00479Q96M42 142 aa18.88■□□□□ 0.61
TTC3-225ENST00000540756 RPL23P62829 140 aaKnown RBP18.87■□□□□ 0.61
TTC3-225ENST00000540756 TEX38Q6PEX7 206 aa18.87■□□□□ 0.61
TTC3-225ENST00000540756 Q6ZSV7 163 aa18.87■□□□□ 0.61
TTC3-225ENST00000540756 SETD2Q9BYW2 2564 aaPredicted RBP18.87■□□□□ 0.61
TTC3-225ENST00000540756 PGPA6NDG6 321 aa18.86■□□□□ 0.61
TTC3-225ENST00000540756 SLC17A3O00476 420 aa18.86■□□□□ 0.61
TTC3-225ENST00000540756 RPL35P42766 123 aaKnown RBP18.86■□□□□ 0.61
TTC3-225ENST00000540756 ADIRFQ15847 76 aa18.86■□□□□ 0.61
TTC3-225ENST00000540756 SRD5A1P18405 259 aa18.86■□□□□ 0.61
TTC3-225ENST00000540756 RHEBQ15382 184 aa18.86■□□□□ 0.61
TTC3-225ENST00000540756 HIST2H2BDQ6DRA6 164 aa18.86■□□□□ 0.61
TTC3-225ENST00000540756 EXOC3-AS1Q8N2X6 119 aa18.86■□□□□ 0.61
TTC3-225ENST00000540756 C2CD4CQ8TF44 421 aa18.86■□□□□ 0.61
TTC3-225ENST00000540756 Q9H3A6 140 aa18.86■□□□□ 0.61
TTC3-225ENST00000540756 TMEM160Q9NX00 188 aa18.86■□□□□ 0.61
TTC3-225ENST00000540756 SLC35B1P78383 322 aa18.85■□□□□ 0.61
TTC3-225ENST00000540756 SMAD5-AS1Q9Y6J3 95 aa18.85■□□□□ 0.61
TTC3-225ENST00000540756 TRBV19A0A075B6N1 114 aa18.84■□□□□ 0.61
TTC3-225ENST00000540756 OR8I2Q8N0Y5 310 aa18.84■□□□□ 0.61
TTC3-225ENST00000540756 OR4F17Q8NGA8 305 aa18.84■□□□□ 0.61
TTC3-225ENST00000540756 NSD1Q96L73 2696 aaPredicted RBP18.84■□□□□ 0.61
TTC3-225ENST00000540756 BUB3O43684 328 aa18.84■□□□□ 0.61
TTC3-225ENST00000540756 ISOC2Q96AB3 205 aa18.84■□□□□ 0.61
TTC3-225ENST00000540756 FOXE3Q13461 319 aa18.83■□□□□ 0.61
TTC3-225ENST00000540756 RPH3ALQ9UNE2 315 aa18.83■□□□□ 0.61
TTC3-225ENST00000540756 TMEM89A2RUT3 159 aa18.83■□□□□ 0.6
TTC3-225ENST00000540756 PNRC1Q12796 327 aaPredicted RBP18.83■□□□□ 0.6
TTC3-225ENST00000540756 PEF1Q9UBV8 284 aaKnown RBP18.83■□□□□ 0.6
TTC3-225ENST00000540756 TRAV34A0A0B4J273 112 aa18.82■□□□□ 0.6
TTC3-225ENST00000540756 SLC25A5P05141 298 aaKnown RBP18.82■□□□□ 0.6
TTC3-225ENST00000540756 S100A7AQ86SG5 101 aa18.82■□□□□ 0.6
TTC3-225ENST00000540756 LINC01551Q86U37 167 aa18.82■□□□□ 0.6
TTC3-225ENST00000540756 SGK494Q96LW2 274 aa18.82■□□□□ 0.6
TTC3-225ENST00000540756 HELTA6NFD8 242 aa18.81■□□□□ 0.6
TTC3-225ENST00000540756 ELANEP08246 267 aa18.81■□□□□ 0.6
TTC3-225ENST00000540756 KLHDC1Q8N7A1 406 aa18.81■□□□□ 0.6
TTC3-225ENST00000540756 MYOZ3Q8TDC0 251 aa18.81■□□□□ 0.6
TTC3-225ENST00000540756 METTL26Q96S19 204 aa18.81■□□□□ 0.6
TTC3-225ENST00000540756 BAHCC1Q9P281 2608 aa18.81■□□□□ 0.6
TTC3-225ENST00000540756 C18orf65Q6ZTR6 163 aa18.81■□□□□ 0.6
TTC3-225ENST00000540756 OCC1Q8TAD7 63 aa18.81■□□□□ 0.6
TTC3-225ENST00000540756 EPDR1Q9UM22 224 aa18.81■□□□□ 0.6
TTC3-225ENST00000540756 SETXQ7Z333 2677 aaKnown RBP18.8■□□□□ 0.6
TTC3-225ENST00000540756 ZNF320A2RRD8 509 aa18.8■□□□□ 0.6
TTC3-225ENST00000540756 INAFM1C9JVW0 142 aa18.8■□□□□ 0.6
TTC3-225ENST00000540756 NDUFA4O00483 81 aa18.8■□□□□ 0.6
TTC3-225ENST00000540756 PEX7O00628 323 aa18.8■□□□□ 0.6
TTC3-225ENST00000540756 RPL7P18124 248 aaKnown RBP18.8■□□□□ 0.6
TTC3-225ENST00000540756 RNF212Q495C1 297 aa18.8■□□□□ 0.6
TTC3-225ENST00000540756 SIGLEC15Q6ZMC9 328 aa18.8■□□□□ 0.6
TTC3-225ENST00000540756 TMA7Q9Y2S6 64 aaKnown RBP18.8■□□□□ 0.6
TTC3-225ENST00000540756 CLDN34H7C241 214 aa18.79■□□□□ 0.6
TTC3-225ENST00000540756 GGCTO75223 188 aaKnown RBP18.79■□□□□ 0.6
TTC3-225ENST00000540756 CD99P14209 185 aa18.79■□□□□ 0.6
TTC3-225ENST00000540756 CDC42EP3Q9UKI2 254 aa18.79■□□□□ 0.6
TTC3-225ENST00000540756 FN1P02751 2386 aaKnown RBP18.79■□□□□ 0.6
TTC3-225ENST00000540756 EDN2P20800 178 aa18.79■□□□□ 0.6
TTC3-225ENST00000540756 CENPWQ5EE01 88 aa18.79■□□□□ 0.6
TTC3-225ENST00000540756 TCTEX1D4Q5JR98 221 aa18.79■□□□□ 0.6
TTC3-225ENST00000540756 SMCO4Q9NRQ5 59 aa18.79■□□□□ 0.6
TTC3-225ENST00000540756 U3KQE9 123 aa18.79■□□□□ 0.6
TTC3-225ENST00000540756 K7EN84 100 aa18.78■□□□□ 0.6
TTC3-225ENST00000540756 FAM209BQ5JX69 171 aa18.78■□□□□ 0.6
TTC3-225ENST00000540756 IGFL4Q6B9Z1 124 aa18.78■□□□□ 0.6
TTC3-225ENST00000540756 RNF152Q8N8N0 203 aa18.78■□□□□ 0.6
TTC3-225ENST00000540756 OTORQ9NRC9 128 aa18.78■□□□□ 0.6
TTC3-225ENST00000540756 RNASE1P07998 156 aaKnown RBP18.78■□□□□ 0.6
TTC3-225ENST00000540756 SELENOKQ9Y6D0 94 aa18.78■□□□□ 0.6
TTC3-225ENST00000540756 ISLRO14498 428 aa18.77■□□□□ 0.6
TTC3-225ENST00000540756 TM4SF20Q53R12 229 aa18.77■□□□□ 0.6
TTC3-225ENST00000540756 B4DEV8 164 aa18.76■□□□□ 0.59
TTC3-225ENST00000540756 M0R3E3 92 aa18.76■□□□□ 0.59
TTC3-225ENST00000540756 TSPAN4O14817 238 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms