RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 CLEC3BP05452 202 aa8.1□□□□□ -1.11
ATL3-204ENST00000540699 ADCYAP1P18509 176 aa8.1□□□□□ -1.11
ATL3-204ENST00000540699 ORM2P19652 201 aa8.1□□□□□ -1.11
ATL3-204ENST00000540699 GCHFRP30047 84 aa8.1□□□□□ -1.11
ATL3-204ENST00000540699 TAS2R45P59539 299 aa8.1□□□□□ -1.11
ATL3-204ENST00000540699 LYZP61626 148 aa8.1□□□□□ -1.11
ATL3-204ENST00000540699 PEA15Q15121 130 aa8.1□□□□□ -1.11
ATL3-204ENST00000540699 USF2Q15853 346 aaPredicted RBP8.1□□□□□ -1.11
ATL3-204ENST00000540699 HAGHQ16775 308 aa8.1□□□□□ -1.11
ATL3-204ENST00000540699 KHDC3LQ587J8 217 aa8.1□□□□□ -1.11
ATL3-204ENST00000540699 C10orf91Q5T1B1 145 aa8.1□□□□□ -1.11
ATL3-204ENST00000540699 CLEC19AQ6UXS0 136 aa8.1□□□□□ -1.11
ATL3-204ENST00000540699 ZNF600Q6ZNG1 722 aa8.1□□□□□ -1.11
ATL3-204ENST00000540699 PQLC2Q6ZP29 291 aa8.1□□□□□ -1.11
ATL3-204ENST00000540699 LINC00305Q7Z4B0 112 aa8.1□□□□□ -1.11
ATL3-204ENST00000540699 Q8WTZ3 238 aa8.1□□□□□ -1.11
ATL3-204ENST00000540699 DUX3Q96PT4 197 aa8.1□□□□□ -1.11
ATL3-204ENST00000540699 UHRF2Q96PU4 802 aa8.1□□□□□ -1.11
ATL3-204ENST00000540699 OR5B12Q96R08 314 aa8.1□□□□□ -1.11
ATL3-204ENST00000540699 ZFAND3Q9H8U3 227 aa8.1□□□□□ -1.11
ATL3-204ENST00000540699 TREM1Q9NP99 234 aa8.1□□□□□ -1.11
ATL3-204ENST00000540699 MANBALQ9NQG1 85 aa8.1□□□□□ -1.11
ATL3-204ENST00000540699 HIGD1AQ9Y241 93 aa8.1□□□□□ -1.11
ATL3-204ENST00000540699 TRAV5A0A0B4J249 113 aa8.09□□□□□ -1.11
ATL3-204ENST00000540699 LINC01619G3V211 115 aa8.09□□□□□ -1.11
ATL3-204ENST00000540699 H3BRN7 92 aa8.09□□□□□ -1.11
ATL3-204ENST00000540699 TRBV12-3P01733 135 aa8.09□□□□□ -1.11
ATL3-204ENST00000540699 IL4P05112 153 aa8.09□□□□□ -1.11
ATL3-204ENST00000540699 TAGLN2P37802 199 aaKnown RBP8.09□□□□□ -1.11
ATL3-204ENST00000540699 PPT1P50897 306 aa8.09□□□□□ -1.11
ATL3-204ENST00000540699 C1QL4Q86Z23 238 aa8.09□□□□□ -1.11
ATL3-204ENST00000540699 SLC25A39Q9BZJ4 359 aaPredicted RBP8.09□□□□□ -1.11
ATL3-204ENST00000540699 EIF5A2Q9GZV4 153 aaKnown RBP8.09□□□□□ -1.11
ATL3-204ENST00000540699 PEF1Q9UBV8 284 aaKnown RBP8.09□□□□□ -1.11
ATL3-204ENST00000540699 VAX2Q9UIW0 290 aa8.09□□□□□ -1.11
ATL3-204ENST00000540699 PUS1Q9Y606 427 aaKnown RBP eCLIP8.09□□□□□ -1.11
ATL3-204ENST00000540699 ARL2-SNX15V9GYD0 113 aa8.09□□□□□ -1.11
ATL3-204ENST00000540699 SRP19P09132 144 aaKnown RBP8.08□□□□□ -1.12
ATL3-204ENST00000540699 TOMM20LQ6UXN7 152 aa8.08□□□□□ -1.12
ATL3-204ENST00000540699 RXFP4Q8TDU9 374 aa8.08□□□□□ -1.12
ATL3-204ENST00000540699 DPF1Q92782 380 aa8.08□□□□□ -1.12
ATL3-204ENST00000540699 SHANK2-AS3Q9BTD1 123 aa8.08□□□□□ -1.12
ATL3-204ENST00000540699 TMEM167BQ9NRX6 74 aa8.08□□□□□ -1.12
ATL3-204ENST00000540699 SORL1Q92673 2214 aa8.07□□□□□ -1.12
ATL3-204ENST00000540699 PPP5D1E7EU14 171 aa8.07□□□□□ -1.12
ATL3-204ENST00000540699 BMPR1BO00238 502 aa8.07□□□□□ -1.12
ATL3-204ENST00000540699 MRPS12O15235 138 aaKnown RBP8.07□□□□□ -1.12
ATL3-204ENST00000540699 OR7C2O60412 319 aa8.07□□□□□ -1.12
ATL3-204ENST00000540699 PAGE4O60829 102 aa8.07□□□□□ -1.12
ATL3-204ENST00000540699 SFTA3P0C7M3 94 aa8.07□□□□□ -1.12
ATL3-204ENST00000540699 GP9P14770 177 aa8.07□□□□□ -1.12
ATL3-204ENST00000540699 CD33P20138 364 aa8.07□□□□□ -1.12
ATL3-204ENST00000540699 HOXD3P31249 432 aaPredicted RBP8.07□□□□□ -1.12
ATL3-204ENST00000540699 ARL3P36405 182 aa8.07□□□□□ -1.12
ATL3-204ENST00000540699 SLURP1P55000 103 aa8.07□□□□□ -1.12
ATL3-204ENST00000540699 CD81P60033 236 aa8.07□□□□□ -1.12
ATL3-204ENST00000540699 RELQ04864 619 aaPredicted RBP8.07□□□□□ -1.12
ATL3-204ENST00000540699 KLF5Q13887 457 aaPredicted RBP8.07□□□□□ -1.12
ATL3-204ENST00000540699 SAMD5Q5TGI4 173 aa8.07□□□□□ -1.12
ATL3-204ENST00000540699 IQCF2Q8IXL9 164 aa8.07□□□□□ -1.12
ATL3-204ENST00000540699 FXYD5Q96DB9 178 aa8.07□□□□□ -1.12
ATL3-204ENST00000540699 NARS2Q96I59 477 aaKnown RBP8.07□□□□□ -1.12
ATL3-204ENST00000540699 PAXXQ9BUH6 204 aa8.07□□□□□ -1.12
ATL3-204ENST00000540699 SLC35B3Q9H1N7 401 aa8.07□□□□□ -1.12
ATL3-204ENST00000540699 TMEM14CQ9P0S9 112 aa8.07□□□□□ -1.12
ATL3-204ENST00000540699 CARHSP1Q9Y2V2 147 aaKnown RBP8.07□□□□□ -1.12
ATL3-204ENST00000540699 FAM74A7A6NL05 159 aa8.06□□□□□ -1.12
ATL3-204ENST00000540699 PYYP10082 97 aa8.06□□□□□ -1.12
ATL3-204ENST00000540699 ATP5G3P48201 142 aa8.06□□□□□ -1.12
ATL3-204ENST00000540699 MEF2BQ02080 365 aaPredicted RBP8.06□□□□□ -1.12
ATL3-204ENST00000540699 KPRPQ5T749 579 aaPredicted RBP8.06□□□□□ -1.12
ATL3-204ENST00000540699 FAM90A2PQ658T7 463 aa8.06□□□□□ -1.12
ATL3-204ENST00000540699 LEMD1Q68G75 181 aa8.06□□□□□ -1.12
ATL3-204ENST00000540699 STXBP6Q8NFX7 210 aa8.06□□□□□ -1.12
ATL3-204ENST00000540699 DLX4Q92988 240 aaPredicted RBP8.06□□□□□ -1.12
ATL3-204ENST00000540699 TXNDC17Q9BRA2 123 aa8.06□□□□□ -1.12
ATL3-204ENST00000540699 MCRIP2Q9BUT9 160 aaKnown RBP8.06□□□□□ -1.12
ATL3-204ENST00000540699 SEC11CQ9BY50 192 aa8.06□□□□□ -1.12
ATL3-204ENST00000540699 OR51M1Q9H341 326 aa8.06□□□□□ -1.12
ATL3-204ENST00000540699 YTHDF2Q9Y5A9 579 aaKnown RBP8.06□□□□□ -1.12
ATL3-204ENST00000540699 IGHV3-35A0A0C4DH35 117 aa8.05□□□□□ -1.12
ATL3-204ENST00000540699 A0A1W2PRE2 83 aa8.05□□□□□ -1.12
ATL3-204ENST00000540699 ZNF98A6NK75 572 aa8.05□□□□□ -1.12
ATL3-204ENST00000540699 C11orf94C9JXX5 98 aa8.05□□□□□ -1.12
ATL3-204ENST00000540699 NDUFA4O00483 81 aa8.05□□□□□ -1.12
ATL3-204ENST00000540699 OVOL1O14753 267 aa8.05□□□□□ -1.12
ATL3-204ENST00000540699 GGCTO75223 188 aaKnown RBP8.05□□□□□ -1.12
ATL3-204ENST00000540699 OR10J4P0C629 311 aa8.05□□□□□ -1.12
ATL3-204ENST00000540699 UBE2G2P60604 165 aa8.05□□□□□ -1.12
ATL3-204ENST00000540699 UBE2L3P68036 154 aaKnown RBP8.05□□□□□ -1.12
ATL3-204ENST00000540699 GPHB5Q86YW7 130 aa8.05□□□□□ -1.12
ATL3-204ENST00000540699 CCDC28AQ8IWP9 274 aa8.05□□□□□ -1.12
ATL3-204ENST00000540699 CYB561D1Q8N8Q1 229 aa8.05□□□□□ -1.12
ATL3-204ENST00000540699 GPR61Q9BZJ8 451 aa8.05□□□□□ -1.12
ATL3-204ENST00000540699 RABAC1Q9UI14 185 aa8.05□□□□□ -1.12
ATL3-204ENST00000540699 U3KQE9 123 aa8.05□□□□□ -1.12
ATL3-204ENST00000540699 F8W036 122 aa8.04□□□□□ -1.12
ATL3-204ENST00000540699 G3V4G9 280 aa8.04□□□□□ -1.12
ATL3-204ENST00000540699 TMEM250H0YL14 139 aa8.04□□□□□ -1.12
ATL3-204ENST00000540699 LGALS9O00182 355 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms