RNA–Protein interactions for RNA: ENST00000540669.1

VPS33A-204, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS33A, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-204ENST00000540669 ACOT6Q3I5F7 207 aaPredicted RBP7.96□□□□□ -1.14
VPS33A-204ENST00000540669 C10orf113Q5VZT2 155 aa7.96□□□□□ -1.14
VPS33A-204ENST00000540669 EIF5AL1Q6IS14 154 aaKnown RBP7.96□□□□□ -1.14
VPS33A-204ENST00000540669 LINC00305Q7Z4B0 112 aa7.96□□□□□ -1.14
VPS33A-204ENST00000540669 OR1B1Q8NGR6 318 aa7.96□□□□□ -1.14
VPS33A-204ENST00000540669 LYPD6BQ8NI32 183 aa7.96□□□□□ -1.14
VPS33A-204ENST00000540669 MBD3L1Q8WWY6 194 aa7.96□□□□□ -1.14
VPS33A-204ENST00000540669 SLC25A2Q9BXI2 301 aa7.96□□□□□ -1.14
VPS33A-204ENST00000540669 DOK5Q9P104 306 aa7.96□□□□□ -1.14
VPS33A-204ENST00000540669 PEMTQ9UBM1 199 aa7.96□□□□□ -1.14
VPS33A-204ENST00000540669 CTXND1A0A1B0GTU2 59 aa7.95□□□□□ -1.14
VPS33A-204ENST00000540669 SOCS3O14543 225 aa7.95□□□□□ -1.14
VPS33A-204ENST00000540669 RGS13O14921 159 aa7.95□□□□□ -1.14
VPS33A-204ENST00000540669 ORM2P19652 201 aa7.95□□□□□ -1.14
VPS33A-204ENST00000540669 NPPCP23582 126 aa7.95□□□□□ -1.14
VPS33A-204ENST00000540669 FHITP49789 147 aa7.95□□□□□ -1.14
VPS33A-204ENST00000540669 RHOBP62745 196 aa7.95□□□□□ -1.14
VPS33A-204ENST00000540669 ALKAL2Q6UX46 152 aa7.95□□□□□ -1.14
VPS33A-204ENST00000540669 MIR17HGQ75NE6 70 aa7.95□□□□□ -1.14
VPS33A-204ENST00000540669 ZNF680Q8NEM1 530 aa7.95□□□□□ -1.14
VPS33A-204ENST00000540669 OR10G4Q8NGN3 311 aa7.95□□□□□ -1.14
VPS33A-204ENST00000540669 OR10G9Q8NGN4 311 aa7.95□□□□□ -1.14
VPS33A-204ENST00000540669 OR10G7Q8NGN6 311 aa7.95□□□□□ -1.14
VPS33A-204ENST00000540669 GPR82Q96P67 336 aa7.95□□□□□ -1.14
VPS33A-204ENST00000540669 C20orf24Q9BUV8 137 aa7.95□□□□□ -1.14
VPS33A-204ENST00000540669 PBDC1Q9BVG4 233 aa7.95□□□□□ -1.14
VPS33A-204ENST00000540669 RHPN1-AS1Q9BWJ2 59 aa7.95□□□□□ -1.14
VPS33A-204ENST00000540669 SMAD5-AS1Q9Y6J3 95 aa7.95□□□□□ -1.14
VPS33A-204ENST00000540669 ZNF207O43670 478 aaKnown RBP7.94□□□□□ -1.14
VPS33A-204ENST00000540669 CDC34P49427 236 aaPredicted RBP7.94□□□□□ -1.14
VPS33A-204ENST00000540669 INSL3P51460 131 aa7.94□□□□□ -1.14
VPS33A-204ENST00000540669 DEFB114Q30KQ6 69 aa7.94□□□□□ -1.14
VPS33A-204ENST00000540669 FAM74A1Q5RGS3 127 aa7.94□□□□□ -1.14
VPS33A-204ENST00000540669 FAM78BQ5VT40 261 aa7.94□□□□□ -1.14
VPS33A-204ENST00000540669 OR2K2Q8NGT1 345 aa7.94□□□□□ -1.14
VPS33A-204ENST00000540669 RAB24Q969Q5 203 aa7.94□□□□□ -1.14
VPS33A-204ENST00000540669 FXYD5Q96DB9 178 aa7.94□□□□□ -1.14
VPS33A-204ENST00000540669 SLC25A22Q9H936 323 aa7.94□□□□□ -1.14
VPS33A-204ENST00000540669 TRAV2A0A0B4J234 112 aa7.93□□□□□ -1.14
VPS33A-204ENST00000540669 TRAV25A0A0B4J276 109 aa7.93□□□□□ -1.14
VPS33A-204ENST00000540669 A0A1W2PS18 150 aa7.93□□□□□ -1.14
VPS33A-204ENST00000540669 ZNF320A2RRD8 509 aa7.93□□□□□ -1.14
VPS33A-204ENST00000540669 NMBP08949 121 aa7.93□□□□□ -1.14
VPS33A-204ENST00000540669 PMS2P11Q13670 270 aa7.93□□□□□ -1.14
VPS33A-204ENST00000540669 AKR1C8PQ5T2L2 129 aa7.93□□□□□ -1.14
VPS33A-204ENST00000540669 LEMD1Q68G75 181 aa7.93□□□□□ -1.14
VPS33A-204ENST00000540669 S100A7AQ86SG5 101 aa7.93□□□□□ -1.14
VPS33A-204ENST00000540669 TMEM61Q8N0U2 210 aa7.93□□□□□ -1.14
VPS33A-204ENST00000540669 DCANP1Q8TF63 244 aa7.93□□□□□ -1.14
VPS33A-204ENST00000540669 SAT2Q96F10 170 aaPredicted RBP7.93□□□□□ -1.14
VPS33A-204ENST00000540669 TMEM231Q9H6L2 316 aa7.93□□□□□ -1.14
VPS33A-204ENST00000540669 RNF24Q9Y225 148 aa7.93□□□□□ -1.14
VPS33A-204ENST00000540669 MEGF8Q7Z7M0 2845 aa7.93□□□□□ -1.14
VPS33A-204ENST00000540669 TRAV5A0A0B4J249 113 aa7.92□□□□□ -1.14
VPS33A-204ENST00000540669 H3BQ15 152 aa7.92□□□□□ -1.14
VPS33A-204ENST00000540669 TSPAN4O14817 238 aa7.92□□□□□ -1.14
VPS33A-204ENST00000540669 ZNF253O75346 499 aa7.92□□□□□ -1.14
VPS33A-204ENST00000540669 CD5P06127 495 aa7.92□□□□□ -1.14
VPS33A-204ENST00000540669 RPL7P18124 248 aaKnown RBP7.92□□□□□ -1.14
VPS33A-204ENST00000540669 S100A7P31151 101 aa7.92□□□□□ -1.14
VPS33A-204ENST00000540669 KHDC3LQ587J8 217 aa7.92□□□□□ -1.14
VPS33A-204ENST00000540669 FAM122CQ6P4D5 195 aa7.92□□□□□ -1.14
VPS33A-204ENST00000540669 PQLC2Q6ZP29 291 aa7.92□□□□□ -1.14
VPS33A-204ENST00000540669 STXBP6Q8NFX7 210 aa7.92□□□□□ -1.14
VPS33A-204ENST00000540669 ELOVL1Q9BW60 279 aa7.92□□□□□ -1.14
VPS33A-204ENST00000540669 ACTR3CQ9C0K3 210 aaPredicted RBP7.92□□□□□ -1.14
VPS33A-204ENST00000540669 HRH4Q9H3N8 390 aa7.92□□□□□ -1.14
VPS33A-204ENST00000540669 PFDN2Q9UHV9 154 aa7.92□□□□□ -1.14
VPS33A-204ENST00000540669 ARL2-SNX15V9GYD0 113 aa7.92□□□□□ -1.14
VPS33A-204ENST00000540669 SORL1Q92673 2214 aa7.91□□□□□ -1.14
VPS33A-204ENST00000540669 IGHV3OR16-13A0A075B7E8 117 aa7.91□□□□□ -1.14
VPS33A-204ENST00000540669 IGHV3-49A0A0A0MS15 119 aa7.91□□□□□ -1.14
VPS33A-204ENST00000540669 IGHV3-74A0A0B4J1X5 117 aa7.91□□□□□ -1.14
VPS33A-204ENST00000540669 MAP1LC3B2A6NCE7 125 aa7.91□□□□□ -1.14
VPS33A-204ENST00000540669 HELTA6NFD8 242 aa7.91□□□□□ -1.14
VPS33A-204ENST00000540669 EIF3GO75821 320 aaKnown RBP eCLIP7.91□□□□□ -1.14
VPS33A-204ENST00000540669 NDUFB4O95168 129 aa7.91□□□□□ -1.14
VPS33A-204ENST00000540669 ARL14EPLP0DKL9 152 aa7.91□□□□□ -1.14
VPS33A-204ENST00000540669 BMI1P35226 326 aa7.91□□□□□ -1.14
VPS33A-204ENST00000540669 MEOX2P50222 304 aa7.91□□□□□ -1.14
VPS33A-204ENST00000540669 EGFEM1PQ0D2K5 195 aa7.91□□□□□ -1.14
VPS33A-204ENST00000540669 PDE6HQ13956 83 aa7.91□□□□□ -1.14
VPS33A-204ENST00000540669 C9orf66Q5T8R8 295 aa7.91□□□□□ -1.14
VPS33A-204ENST00000540669 SAMD5Q5TGI4 173 aa7.91□□□□□ -1.14
VPS33A-204ENST00000540669 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.91□□□□□ -1.14
VPS33A-204ENST00000540669 SIGLEC15Q6ZMC9 328 aa7.91□□□□□ -1.14
VPS33A-204ENST00000540669 ZNF767PQ75MW2 155 aa7.91□□□□□ -1.14
VPS33A-204ENST00000540669 BPIFA4PQ86YQ2 179 aa7.91□□□□□ -1.14
VPS33A-204ENST00000540669 FAM213BQ8TBF2 198 aa7.91□□□□□ -1.14
VPS33A-204ENST00000540669 RNF141Q8WVD5 230 aa7.91□□□□□ -1.14
VPS33A-204ENST00000540669 MAP1LC3BQ9GZQ8 125 aa7.91□□□□□ -1.14
VPS33A-204ENST00000540669 ZNF256Q9Y2P7 627 aaPredicted RBP7.91□□□□□ -1.14
VPS33A-204ENST00000540669 TRBV19A0A075B6N1 114 aa7.9□□□□□ -1.14
VPS33A-204ENST00000540669 TRAV8-2A0A0B4J237 113 aa7.9□□□□□ -1.14
VPS33A-204ENST00000540669 IGHV3-66A0A0C4DH42 116 aa7.9□□□□□ -1.14
VPS33A-204ENST00000540669 IZUMO1RA6ND01 250 aa7.9□□□□□ -1.14
VPS33A-204ENST00000540669 K7EQG2 157 aa7.9□□□□□ -1.14
VPS33A-204ENST00000540669 SLC17A3O00476 420 aa7.9□□□□□ -1.14
VPS33A-204ENST00000540669 IFNA7P01567 189 aa7.9□□□□□ -1.14
VPS33A-204ENST00000540669 PYYP10082 97 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms