RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 ATG101Q9BSB4 218 aa8.46□□□□□ -1.06
CBX3P4-202ENST00000540428 TMEM147Q9BVK8 224 aa8.46□□□□□ -1.06
CBX3P4-202ENST00000540428 PAIP2BQ9ULR5 123 aaKnown RBP8.46□□□□□ -1.06
CBX3P4-202ENST00000540428 SYNGR2O43760 224 aa8.45□□□□□ -1.06
CBX3P4-202ENST00000540428 ORM2P19652 201 aa8.45□□□□□ -1.06
CBX3P4-202ENST00000540428 TRAV8-2A0A0B4J237 113 aa8.44□□□□□ -1.06
CBX3P4-202ENST00000540428 NBDYA0A0U1RRE5 68 aa8.44□□□□□ -1.06
CBX3P4-202ENST00000540428 FABP12A6NFH5 140 aa8.44□□□□□ -1.06
CBX3P4-202ENST00000540428 ZNF705GA8MUZ8 300 aaPredicted RBP8.44□□□□□ -1.06
CBX3P4-202ENST00000540428 M0R2Z0 102 aa8.44□□□□□ -1.06
CBX3P4-202ENST00000540428 AP3S2P59780 193 aa8.44□□□□□ -1.06
CBX3P4-202ENST00000540428 SPINK13Q1W4C9 94 aa8.44□□□□□ -1.06
CBX3P4-202ENST00000540428 TMED4Q7Z7H5 227 aa8.44□□□□□ -1.06
CBX3P4-202ENST00000540428 TMEM256Q8N2U0 113 aa8.44□□□□□ -1.06
CBX3P4-202ENST00000540428 ZNRF2Q8NHG8 242 aa8.44□□□□□ -1.06
CBX3P4-202ENST00000540428 DEDD2Q8WXF8 326 aa8.44□□□□□ -1.06
CBX3P4-202ENST00000540428 ABCA13Q86UQ4 5058 aa8.44□□□□□ -1.06
CBX3P4-202ENST00000540428 PLAC8L1A1L4L8 177 aa8.43□□□□□ -1.06
CBX3P4-202ENST00000540428 H3BRN7 92 aa8.43□□□□□ -1.06
CBX3P4-202ENST00000540428 BOLA2-SMG1P6H3BVE0 249 aa8.43□□□□□ -1.06
CBX3P4-202ENST00000540428 WRBO00258 174 aa8.43□□□□□ -1.06
CBX3P4-202ENST00000540428 CDK2AP2O75956 126 aa8.43□□□□□ -1.06
CBX3P4-202ENST00000540428 ATP5G1P05496 136 aa8.43□□□□□ -1.06
CBX3P4-202ENST00000540428 DEFB130BP0DP73 79 aa8.43□□□□□ -1.06
CBX3P4-202ENST00000540428 DEFB130AP0DP74 79 aa8.43□□□□□ -1.06
CBX3P4-202ENST00000540428 RPL7P18124 248 aaKnown RBP8.43□□□□□ -1.06
CBX3P4-202ENST00000540428 VAMP1P23763 118 aa8.43□□□□□ -1.06
CBX3P4-202ENST00000540428 GATA2P23769 480 aaPredicted RBP8.43□□□□□ -1.06
CBX3P4-202ENST00000540428 TNFSF8P32971 234 aa8.43□□□□□ -1.06
CBX3P4-202ENST00000540428 ATP5G3P48201 142 aa8.43□□□□□ -1.06
CBX3P4-202ENST00000540428 TMBIM6P55061 237 aa8.43□□□□□ -1.06
CBX3P4-202ENST00000540428 CCL18P55774 89 aa8.43□□□□□ -1.06
CBX3P4-202ENST00000540428 AKR1C1Q04828 323 aa8.43□□□□□ -1.06
CBX3P4-202ENST00000540428 TNP2Q05952 138 aa8.43□□□□□ -1.06
CBX3P4-202ENST00000540428 TMEM182Q6ZP80 229 aaPredicted RBP8.43□□□□□ -1.06
CBX3P4-202ENST00000540428 TMEM144Q7Z5S9 345 aa8.43□□□□□ -1.06
CBX3P4-202ENST00000540428 C6orf223Q8N319 242 aa8.43□□□□□ -1.06
CBX3P4-202ENST00000540428 SLC25A21Q9BQT8 299 aaPredicted RBP8.43□□□□□ -1.06
CBX3P4-202ENST00000540428 SHANK2-AS3Q9BTD1 123 aa8.43□□□□□ -1.06
CBX3P4-202ENST00000540428 KRTAP4-5Q9BYR2 181 aa8.43□□□□□ -1.06
CBX3P4-202ENST00000540428 SLIRPQ9GZT3 109 aaKnown RBP8.43□□□□□ -1.06
CBX3P4-202ENST00000540428 NACAE9PAV3 2078 aa8.42□□□□□ -1.06
CBX3P4-202ENST00000540428 A0A087X0K7 114 aa8.42□□□□□ -1.06
CBX3P4-202ENST00000540428 CBY3A6NI87 242 aa8.42□□□□□ -1.06
CBX3P4-202ENST00000540428 C16orf90A8MZG2 172 aa8.42□□□□□ -1.06
CBX3P4-202ENST00000540428 F5H768 121 aa8.42□□□□□ -1.06
CBX3P4-202ENST00000540428 SFT2D2O95562 160 aa8.42□□□□□ -1.06
CBX3P4-202ENST00000540428 PRM2P04554 102 aa8.42□□□□□ -1.06
CBX3P4-202ENST00000540428 TAS2R60P59551 318 aa8.42□□□□□ -1.06
CBX3P4-202ENST00000540428 PLP1P60201 277 aa8.42□□□□□ -1.06
CBX3P4-202ENST00000540428 RAP2BP61225 183 aa8.42□□□□□ -1.06
CBX3P4-202ENST00000540428 FGL1Q08830 312 aa8.42□□□□□ -1.06
CBX3P4-202ENST00000540428 SPANXN5Q5MJ07 72 aa8.42□□□□□ -1.06
CBX3P4-202ENST00000540428 IGFL4Q6B9Z1 124 aa8.42□□□□□ -1.06
CBX3P4-202ENST00000540428 ACOT7LQ6ZUV0 252 aa8.42□□□□□ -1.06
CBX3P4-202ENST00000540428 S100A7AQ86SG5 101 aa8.42□□□□□ -1.06
CBX3P4-202ENST00000540428 BAP18Q8IXM2 172 aa8.42□□□□□ -1.06
CBX3P4-202ENST00000540428 RNF182Q8N6D2 247 aa8.42□□□□□ -1.06
CBX3P4-202ENST00000540428 ZNF738Q8NE65 137 aa8.42□□□□□ -1.06
CBX3P4-202ENST00000540428 TRIM63Q969Q1 353 aa8.42□□□□□ -1.06
CBX3P4-202ENST00000540428 C16orf74Q96GX8 76 aa8.42□□□□□ -1.06
CBX3P4-202ENST00000540428 SLC25A39Q9BZJ4 359 aaPredicted RBP8.42□□□□□ -1.06
CBX3P4-202ENST00000540428 STRAPQ9Y3F4 350 aaKnown RBP8.42□□□□□ -1.06
CBX3P4-202ENST00000540428 TRAV12-2A0A075B6T6 113 aa8.41□□□□□ -1.06
CBX3P4-202ENST00000540428 NUDT3O95989 172 aa8.41□□□□□ -1.06
CBX3P4-202ENST00000540428 IL5P05113 134 aa8.41□□□□□ -1.06
CBX3P4-202ENST00000540428 CXCL3P19876 107 aa8.41□□□□□ -1.06
CBX3P4-202ENST00000540428 AZU1P20160 251 aa8.41□□□□□ -1.06
CBX3P4-202ENST00000540428 SELENOTP62341 195 aa8.41□□□□□ -1.06
CBX3P4-202ENST00000540428 CYP2G1PQ6ZSU1 146 aa8.41□□□□□ -1.06
CBX3P4-202ENST00000540428 TOMM5Q8N4H5 51 aa8.41□□□□□ -1.06
CBX3P4-202ENST00000540428 OR8A1Q8NGG7 326 aa8.41□□□□□ -1.06
CBX3P4-202ENST00000540428 LINC01587Q99440 93 aa8.41□□□□□ -1.06
CBX3P4-202ENST00000540428 RNF24Q9Y225 148 aa8.41□□□□□ -1.06
CBX3P4-202ENST00000540428 HIGD1AQ9Y241 93 aa8.41□□□□□ -1.06
CBX3P4-202ENST00000540428 HYPMO75409 117 aa8.4□□□□□ -1.06
CBX3P4-202ENST00000540428 HOXB5P09067 269 aa8.4□□□□□ -1.06
CBX3P4-202ENST00000540428 ID3Q02535 119 aa8.4□□□□□ -1.06
CBX3P4-202ENST00000540428 HIST1H1AQ02539 215 aaPredicted RBP8.4□□□□□ -1.06
CBX3P4-202ENST00000540428 PPP1R1AQ13522 171 aa8.4□□□□□ -1.06
CBX3P4-202ENST00000540428 ZNF493Q6ZR52 646 aa8.4□□□□□ -1.06
CBX3P4-202ENST00000540428 PPP1R14DQ9NXH3 145 aa8.4□□□□□ -1.06
CBX3P4-202ENST00000540428 LINC00588Q9Y4M8 146 aa8.4□□□□□ -1.06
CBX3P4-202ENST00000540428 TIMM8BQ9Y5J9 83 aaPredicted RBP8.4□□□□□ -1.06
CBX3P4-202ENST00000540428 SMCO3A2RU48 225 aa8.39□□□□□ -1.07
CBX3P4-202ENST00000540428 H3BP45 60 aa8.39□□□□□ -1.07
CBX3P4-202ENST00000540428 NOL3O60936 208 aaKnown RBP8.39□□□□□ -1.07
CBX3P4-202ENST00000540428 LINC00869P0C866 280 aa8.39□□□□□ -1.07
CBX3P4-202ENST00000540428 CXCL2P19875 107 aa8.39□□□□□ -1.07
CBX3P4-202ENST00000540428 CDKN1BP46527 198 aa8.39□□□□□ -1.07
CBX3P4-202ENST00000540428 UBE2MP61081 183 aaKnown RBP8.39□□□□□ -1.07
CBX3P4-202ENST00000540428 RHOBP62745 196 aa8.39□□□□□ -1.07
CBX3P4-202ENST00000540428 FCN2Q15485 313 aa8.39□□□□□ -1.07
CBX3P4-202ENST00000540428 PSG3Q16557 428 aa8.39□□□□□ -1.07
CBX3P4-202ENST00000540428 MCFD2Q8NI22 146 aa8.39□□□□□ -1.07
CBX3P4-202ENST00000540428 RNF141Q8WVD5 230 aa8.39□□□□□ -1.07
CBX3P4-202ENST00000540428 C20orf144Q9BQM9 153 aa8.39□□□□□ -1.07
CBX3P4-202ENST00000540428 HSPG2P98160 4391 aa8.39□□□□□ -1.07
CBX3P4-202ENST00000540428 PMS2P5A8MQ11 134 aa8.38□□□□□ -1.07
CBX3P4-202ENST00000540428 FNDC10F2Z333 226 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms