RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 SPP1P10451 314 aa10.97□□□□□ -0.65
UBE3B-212ENST00000540230 HLA-DRB4P13762 266 aa10.97□□□□□ -0.65
UBE3B-212ENST00000540230 GALR1P47211 349 aa10.97□□□□□ -0.65
UBE3B-212ENST00000540230 SULT1A1P50225 295 aa10.97□□□□□ -0.65
UBE3B-212ENST00000540230 VWC2Q2TAL6 325 aa10.97□□□□□ -0.65
UBE3B-212ENST00000540230 IGFL4Q6B9Z1 124 aa10.97□□□□□ -0.65
UBE3B-212ENST00000540230 MORN3Q6PF18 240 aaPredicted RBP10.97□□□□□ -0.65
UBE3B-212ENST00000540230 ZNF546Q86UE3 836 aa10.97□□□□□ -0.65
UBE3B-212ENST00000540230 NMES1Q9C002 83 aa10.97□□□□□ -0.65
UBE3B-212ENST00000540230 ARV1Q9H2C2 271 aa10.97□□□□□ -0.65
UBE3B-212ENST00000540230 HLA-DRB4X5D2U9 266 aa10.97□□□□□ -0.65
UBE3B-212ENST00000540230 ALMS1Q8TCU4 4167 aa10.97□□□□□ -0.65
UBE3B-212ENST00000540230 UBE2L5PA0A1B0GUS4 154 aa10.96□□□□□ -0.65
UBE3B-212ENST00000540230 ISLRO14498 428 aa10.96□□□□□ -0.65
UBE3B-212ENST00000540230 IGKV3-20P01619 116 aa10.96□□□□□ -0.65
UBE3B-212ENST00000540230 MORN5Q5VZ52 161 aa10.96□□□□□ -0.65
UBE3B-212ENST00000540230 CSNK1G2-AS1Q8NCQ2 148 aa10.96□□□□□ -0.65
UBE3B-212ENST00000540230 SAV1Q9H4B6 383 aaPredicted RBP10.96□□□□□ -0.65
UBE3B-212ENST00000540230 UQCC1Q9NVA1 299 aa10.96□□□□□ -0.65
UBE3B-212ENST00000540230 WDR83OSQ9Y284 106 aa10.96□□□□□ -0.65
UBE3B-212ENST00000540230 TRAV8-2A0A0B4J237 113 aa10.95□□□□□ -0.66
UBE3B-212ENST00000540230 DEFB4AO15263 64 aa10.95□□□□□ -0.66
UBE3B-212ENST00000540230 ID1P41134 155 aa10.95□□□□□ -0.66
UBE3B-212ENST00000540230 CAMLGP49069 296 aa10.95□□□□□ -0.66
UBE3B-212ENST00000540230 NHLH2Q02577 135 aa10.95□□□□□ -0.66
UBE3B-212ENST00000540230 PMS2P11Q13670 270 aa10.95□□□□□ -0.66
UBE3B-212ENST00000540230 MIC13Q5XKP0 118 aa10.95□□□□□ -0.66
UBE3B-212ENST00000540230 TMEM37Q8WXS4 190 aa10.95□□□□□ -0.66
UBE3B-212ENST00000540230 C16orf92Q96LL3 132 aa10.95□□□□□ -0.66
UBE3B-212ENST00000540230 MRPS12O15235 138 aaKnown RBP10.94□□□□□ -0.66
UBE3B-212ENST00000540230 SSNA1O43805 119 aa10.94□□□□□ -0.66
UBE3B-212ENST00000540230 MEOX2P50222 304 aa10.94□□□□□ -0.66
UBE3B-212ENST00000540230 FXYD7P58549 80 aa10.94□□□□□ -0.66
UBE3B-212ENST00000540230 FGL1Q08830 312 aa10.94□□□□□ -0.66
UBE3B-212ENST00000540230 FOXI2Q6ZQN5 318 aa10.94□□□□□ -0.66
UBE3B-212ENST00000540230 STX12Q86Y82 276 aa10.94□□□□□ -0.66
UBE3B-212ENST00000540230 GPR82Q96P67 336 aa10.94□□□□□ -0.66
UBE3B-212ENST00000540230 SNRPCP09234 159 aaKnown RBP10.94□□□□□ -0.66
UBE3B-212ENST00000540230 HLA-DMBP28068 263 aa10.94□□□□□ -0.66
UBE3B-212ENST00000540230 S100A11P31949 105 aa10.94□□□□□ -0.66
UBE3B-212ENST00000540230 PRR20EP86478 221 aa10.94□□□□□ -0.66
UBE3B-212ENST00000540230 PRR20CP86479 221 aa10.94□□□□□ -0.66
UBE3B-212ENST00000540230 PRR20DP86480 221 aa10.94□□□□□ -0.66
UBE3B-212ENST00000540230 PRR20BP86481 221 aa10.94□□□□□ -0.66
UBE3B-212ENST00000540230 PRR20AP86496 221 aa10.94□□□□□ -0.66
UBE3B-212ENST00000540230 BAXQ07812 192 aa10.94□□□□□ -0.66
UBE3B-212ENST00000540230 LINC00305Q7Z4B0 112 aa10.94□□□□□ -0.66
UBE3B-212ENST00000540230 RNF182Q8N6D2 247 aa10.94□□□□□ -0.66
UBE3B-212ENST00000540230 Q8NAQ8 132 aa10.94□□□□□ -0.66
UBE3B-212ENST00000540230 PPP1R1CQ8WVI7 109 aa10.94□□□□□ -0.66
UBE3B-212ENST00000540230 XCL2Q9UBD3 114 aa10.94□□□□□ -0.66
UBE3B-212ENST00000540230 X6R8D5 127 aa10.94□□□□□ -0.66
UBE3B-212ENST00000540230 E5RGE8 158 aa10.93□□□□□ -0.66
UBE3B-212ENST00000540230 PRB4P10163 310 aaPredicted RBP10.93□□□□□ -0.66
UBE3B-212ENST00000540230 RPL7P18124 248 aaKnown RBP10.93□□□□□ -0.66
UBE3B-212ENST00000540230 HBG1P69891 147 aa10.93□□□□□ -0.66
UBE3B-212ENST00000540230 HBG2P69892 147 aa10.93□□□□□ -0.66
UBE3B-212ENST00000540230 OPCMLQ14982 345 aa10.93□□□□□ -0.66
UBE3B-212ENST00000540230 ZNF709Q8N972 641 aa10.93□□□□□ -0.66
UBE3B-212ENST00000540230 RNF126Q9BV68 326 aa10.93□□□□□ -0.66
UBE3B-212ENST00000540230 C11orf68Q9H3H3 251 aaKnown RBP10.93□□□□□ -0.66
UBE3B-212ENST00000540230 ALG5Q9Y673 324 aa10.93□□□□□ -0.66
UBE3B-212ENST00000540230 A0A087X0K7 114 aa10.92□□□□□ -0.66
UBE3B-212ENST00000540230 A0A0J9YX75 114 aa10.92□□□□□ -0.66
UBE3B-212ENST00000540230 ZNF705EA8MWA4 302 aaPredicted RBP10.92□□□□□ -0.66
UBE3B-212ENST00000540230 COX7A2P2O60397 106 aa10.92□□□□□ -0.66
UBE3B-212ENST00000540230 ATF4P18848 351 aaPredicted RBP10.92□□□□□ -0.66
UBE3B-212ENST00000540230 FGF7P21781 194 aa10.92□□□□□ -0.66
UBE3B-212ENST00000540230 S100A7P31151 101 aa10.92□□□□□ -0.66
UBE3B-212ENST00000540230 TMEM41BQ5BJD5 291 aa10.92□□□□□ -0.66
UBE3B-212ENST00000540230 PXDC1Q5TGL8 231 aa10.92□□□□□ -0.66
UBE3B-212ENST00000540230 FAM78BQ5VT40 261 aa10.92□□□□□ -0.66
UBE3B-212ENST00000540230 OR4B1Q8NGF8 309 aa10.92□□□□□ -0.66
UBE3B-212ENST00000540230 OR5C1Q8NGR4 320 aa10.92□□□□□ -0.66
UBE3B-212ENST00000540230 SLC35B3Q9H1N7 401 aa10.92□□□□□ -0.66
UBE3B-212ENST00000540230 RPRMQ9NS64 109 aa10.92□□□□□ -0.66
UBE3B-212ENST00000540230 IGHV4-28A0A0C4DH34 117 aa10.91□□□□□ -0.66
UBE3B-212ENST00000540230 CXorf65A6NEN9 183 aa10.91□□□□□ -0.66
UBE3B-212ENST00000540230 RLN2P04090 185 aa10.91□□□□□ -0.66
UBE3B-212ENST00000540230 RBMY1A1P0DJD3 496 aaKnown RBP10.91□□□□□ -0.66
UBE3B-212ENST00000540230 RBMY1CP0DJD4 496 aa10.91□□□□□ -0.66
UBE3B-212ENST00000540230 CYCSP99999 105 aaKnown RBP10.91□□□□□ -0.66
UBE3B-212ENST00000540230 RBMY1FQ15415 496 aaKnown RBP10.91□□□□□ -0.66
UBE3B-212ENST00000540230 SAMD13Q5VXD3 122 aa10.91□□□□□ -0.66
UBE3B-212ENST00000540230 THAP6Q8TBB0 222 aa10.91□□□□□ -0.66
UBE3B-212ENST00000540230 TRAV5A0A0B4J249 113 aa10.9□□□□□ -0.66
UBE3B-212ENST00000540230 LCE6AA0A183 80 aa10.9□□□□□ -0.66
UBE3B-212ENST00000540230 H3BTX0 84 aa10.9□□□□□ -0.66
UBE3B-212ENST00000540230 MPC2O95563 127 aa10.9□□□□□ -0.66
UBE3B-212ENST00000540230 PTTG1O95997 202 aa10.9□□□□□ -0.66
UBE3B-212ENST00000540230 ZNF705DP0CH99 300 aaPredicted RBP10.9□□□□□ -0.66
UBE3B-212ENST00000540230 ZNF705BP0CI00 300 aaPredicted RBP10.9□□□□□ -0.66
UBE3B-212ENST00000540230 CXCL3P19876 107 aa10.9□□□□□ -0.66
UBE3B-212ENST00000540230 RPL29P47914 159 aaKnown RBP10.9□□□□□ -0.66
UBE3B-212ENST00000540230 NANOS2P60321 138 aaKnown RBP10.9□□□□□ -0.66
UBE3B-212ENST00000540230 B2MP61769 119 aa10.9□□□□□ -0.66
UBE3B-212ENST00000540230 NUTF2P61970 127 aaKnown RBP10.9□□□□□ -0.66
UBE3B-212ENST00000540230 RAB31Q13636 194 aa10.9□□□□□ -0.66
UBE3B-212ENST00000540230 CLINT1Q14677 625 aa10.9□□□□□ -0.66
UBE3B-212ENST00000540230 ATP6V1FQ16864 119 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms