RNA–Protein interactions for RNA: ENST00000539975.5

SNHG1-212, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 955 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-212ENST00000539975 DOK5Q9P104 306 aa4.89□□□□□ -1.63
SNHG1-212ENST00000539975 MLXQ9UH92 298 aa4.89□□□□□ -1.63
SNHG1-212ENST00000539975 WDR83OSQ9Y284 106 aa4.89□□□□□ -1.63
SNHG1-212ENST00000539975 SMAD5-AS1Q9Y6J3 95 aa4.89□□□□□ -1.63
SNHG1-212ENST00000539975 TENM1Q9UKZ4 2725 aa4.89□□□□□ -1.63
SNHG1-212ENST00000539975 IGKV1D-37A0A075B6S9 117 aa4.88□□□□□ -1.63
SNHG1-212ENST00000539975 IGKV1OR2-108A0A075B7D4 117 aa4.88□□□□□ -1.63
SNHG1-212ENST00000539975 OR11H12B2RN74 326 aa4.88□□□□□ -1.63
SNHG1-212ENST00000539975 TAAR5O14804 337 aa4.88□□□□□ -1.63
SNHG1-212ENST00000539975 ARPC5O15511 151 aa4.88□□□□□ -1.63
SNHG1-212ENST00000539975 PFDN1O60925 122 aa4.88□□□□□ -1.63
SNHG1-212ENST00000539975 LYL1P12980 280 aa4.88□□□□□ -1.63
SNHG1-212ENST00000539975 RPL7P18124 248 aaKnown RBP4.88□□□□□ -1.63
SNHG1-212ENST00000539975 GATA2P23769 480 aaPredicted RBP4.88□□□□□ -1.63
SNHG1-212ENST00000539975 RPL29P47914 159 aaKnown RBP4.88□□□□□ -1.63
SNHG1-212ENST00000539975 TFPI2P48307 235 aa4.88□□□□□ -1.63
SNHG1-212ENST00000539975 MEOX2P50222 304 aa4.88□□□□□ -1.63
SNHG1-212ENST00000539975 B2MP61769 119 aa4.88□□□□□ -1.63
SNHG1-212ENST00000539975 EIF5AP63241 154 aaKnown RBP4.88□□□□□ -1.63
SNHG1-212ENST00000539975 USF2Q15853 346 aaPredicted RBP4.88□□□□□ -1.63
SNHG1-212ENST00000539975 VWC2Q2TAL6 325 aa4.88□□□□□ -1.63
SNHG1-212ENST00000539975 GAGE13Q4V321 117 aa4.88□□□□□ -1.63
SNHG1-212ENST00000539975 Q6ZNX1 250 aa4.88□□□□□ -1.63
SNHG1-212ENST00000539975 AKAP14Q86UN6 197 aa4.88□□□□□ -1.63
SNHG1-212ENST00000539975 TMEM61Q8N0U2 210 aa4.88□□□□□ -1.63
SNHG1-212ENST00000539975 GBGT1Q8N5D6 347 aa4.88□□□□□ -1.63
SNHG1-212ENST00000539975 ST8SIA2Q92186 375 aa4.88□□□□□ -1.63
SNHG1-212ENST00000539975 AQP10Q96PS8 301 aa4.88□□□□□ -1.63
SNHG1-212ENST00000539975 PRR25Q96S07 402 aa4.88□□□□□ -1.63
SNHG1-212ENST00000539975 NEURL2Q9BR09 285 aa4.88□□□□□ -1.63
SNHG1-212ENST00000539975 KRTAP4-2Q9BYR5 136 aa4.88□□□□□ -1.63
SNHG1-212ENST00000539975 MFFQ9GZY8 342 aa4.88□□□□□ -1.63
SNHG1-212ENST00000539975 ARV1Q9H2C2 271 aa4.88□□□□□ -1.63
SNHG1-212ENST00000539975 C11orf1Q9H5F2 150 aa4.88□□□□□ -1.63
SNHG1-212ENST00000539975 VSIRQ9H7M9 311 aa4.88□□□□□ -1.63
SNHG1-212ENST00000539975 LSM4Q9Y4Z0 139 aaKnown RBP4.88□□□□□ -1.63
SNHG1-212ENST00000539975 PXMP4Q9Y6I8 212 aa4.88□□□□□ -1.63
SNHG1-212ENST00000539975 TRAV2A0A0B4J234 112 aa4.87□□□□□ -1.63
SNHG1-212ENST00000539975 A0A0D9SG52 128 aa4.87□□□□□ -1.63
SNHG1-212ENST00000539975 A0A1W2PPV4 95 aa4.87□□□□□ -1.63
SNHG1-212ENST00000539975 KANTRA0A1W2PQU2 76 aa4.87□□□□□ -1.63
SNHG1-212ENST00000539975 ZNF98A6NK75 572 aa4.87□□□□□ -1.63
SNHG1-212ENST00000539975 BUB3O43684 328 aa4.87□□□□□ -1.63
SNHG1-212ENST00000539975 JTBO76095 146 aa4.87□□□□□ -1.63
SNHG1-212ENST00000539975 MBP02144 154 aa4.87□□□□□ -1.63
SNHG1-212ENST00000539975 APOHP02749 345 aaPredicted RBP4.87□□□□□ -1.63
SNHG1-212ENST00000539975 PRB2P02812 416 aaPredicted RBP4.87□□□□□ -1.63
SNHG1-212ENST00000539975 PLP1P60201 277 aa4.87□□□□□ -1.63
SNHG1-212ENST00000539975 KRTAP10-11P60412 298 aa4.87□□□□□ -1.63
SNHG1-212ENST00000539975 C16orf54Q6UWD8 224 aa4.87□□□□□ -1.63
SNHG1-212ENST00000539975 LINC00305Q7Z4B0 112 aa4.87□□□□□ -1.63
SNHG1-212ENST00000539975 BPIFA4PQ86YQ2 179 aa4.87□□□□□ -1.63
SNHG1-212ENST00000539975 GATAD1Q8WUU5 269 aa4.87□□□□□ -1.63
SNHG1-212ENST00000539975 CHAC2Q8WUX2 184 aa4.87□□□□□ -1.63
SNHG1-212ENST00000539975 GNPNAT1Q96EK6 184 aaPredicted RBP4.87□□□□□ -1.63
SNHG1-212ENST00000539975 MGST2Q99735 147 aa4.87□□□□□ -1.63
SNHG1-212ENST00000539975 NPCDR1Q9BY65 106 aa4.87□□□□□ -1.63
SNHG1-212ENST00000539975 KRTAP17-1Q9BYP8 105 aa4.87□□□□□ -1.63
SNHG1-212ENST00000539975 SLC25A39Q9BZJ4 359 aaPredicted RBP4.87□□□□□ -1.63
SNHG1-212ENST00000539975 WDR61Q9GZS3 305 aaKnown RBP4.87□□□□□ -1.63
SNHG1-212ENST00000539975 MS4A6AQ9H2W1 248 aa4.87□□□□□ -1.63
SNHG1-212ENST00000539975 NRN1Q9NPD7 142 aa4.87□□□□□ -1.63
SNHG1-212ENST00000539975 SLC39A9Q9NUM3 307 aa4.87□□□□□ -1.63
SNHG1-212ENST00000539975 AURKAIP1Q9NWT8 199 aaPredicted RBP4.87□□□□□ -1.63
SNHG1-212ENST00000539975 TNFSF18Q9UNG2 199 aa4.87□□□□□ -1.63
SNHG1-212ENST00000539975 SELENOKQ9Y6D0 94 aa4.87□□□□□ -1.63
SNHG1-212ENST00000539975 IZUMO1RA6ND01 250 aa4.86□□□□□ -1.63
SNHG1-212ENST00000539975 HMSDA8MTL9 139 aa4.86□□□□□ -1.63
SNHG1-212ENST00000539975 PLXNB1O43157 2135 aa4.86□□□□□ -1.63
SNHG1-212ENST00000539975 EDN2P20800 178 aa4.86□□□□□ -1.63
SNHG1-212ENST00000539975 TAS2R45P59539 299 aa4.86□□□□□ -1.63
SNHG1-212ENST00000539975 RHOBP62745 196 aa4.86□□□□□ -1.63
SNHG1-212ENST00000539975 OPCMLQ14982 345 aa4.86□□□□□ -1.63
SNHG1-212ENST00000539975 ACOT6Q3I5F7 207 aaPredicted RBP4.86□□□□□ -1.63
SNHG1-212ENST00000539975 FFAR4Q5NUL3 377 aa4.86□□□□□ -1.63
SNHG1-212ENST00000539975 MIC13Q5XKP0 118 aa4.86□□□□□ -1.63
SNHG1-212ENST00000539975 ADAMTSL5Q6ZMM2 481 aa4.86□□□□□ -1.63
SNHG1-212ENST00000539975 HYLS1Q96M11 299 aa4.86□□□□□ -1.63
SNHG1-212ENST00000539975 SHANK2-AS3Q9BTD1 123 aa4.86□□□□□ -1.63
SNHG1-212ENST00000539975 RSG1Q9BU20 258 aa4.86□□□□□ -1.63
SNHG1-212ENST00000539975 GGTLC1Q9BX51 225 aa4.86□□□□□ -1.63
SNHG1-212ENST00000539975 PARD6GQ9BYG4 376 aaPredicted RBP4.86□□□□□ -1.63
SNHG1-212ENST00000539975 TNCP24821 2201 aa4.86□□□□□ -1.63
SNHG1-212ENST00000539975 SERF2P84101 59 aa4.85□□□□□ -1.63
SNHG1-212ENST00000539975 ZNF345Q14585 488 aa4.85□□□□□ -1.63
SNHG1-212ENST00000539975 GUK1Q16774 197 aa4.85□□□□□ -1.63
SNHG1-212ENST00000539975 Q5BKY6 102 aa4.85□□□□□ -1.63
SNHG1-212ENST00000539975 FAM78BQ5VT40 261 aa4.85□□□□□ -1.63
SNHG1-212ENST00000539975 EIF5AL1Q6IS14 154 aaKnown RBP4.85□□□□□ -1.63
SNHG1-212ENST00000539975 TMEM182Q6ZP80 229 aaPredicted RBP4.85□□□□□ -1.63
SNHG1-212ENST00000539975 Q6ZSN1 163 aa4.85□□□□□ -1.63
SNHG1-212ENST00000539975 STHQ8IWL8 128 aa4.85□□□□□ -1.63
SNHG1-212ENST00000539975 IQCF2Q8IXL9 164 aa4.85□□□□□ -1.63
SNHG1-212ENST00000539975 TCTE3Q8IZS6 198 aa4.85□□□□□ -1.63
SNHG1-212ENST00000539975 HSD17B11Q8NBQ5 300 aa4.85□□□□□ -1.63
SNHG1-212ENST00000539975 SVIPQ8NHG7 77 aa4.85□□□□□ -1.63
SNHG1-212ENST00000539975 GLMPQ8WWB7 406 aa4.85□□□□□ -1.63
SNHG1-212ENST00000539975 LINC00052Q96N35 136 aa4.85□□□□□ -1.63
SNHG1-212ENST00000539975 UHRF2Q96PU4 802 aa4.85□□□□□ -1.63
SNHG1-212ENST00000539975 FAM110AQ9BQ89 295 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms