RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 HIST1H2BBP33778 126 aa11.89□□□□□ -0.51
DDB1-216ENST00000539739 HIST1H2BDP58876 126 aa11.89□□□□□ -0.51
DDB1-216ENST00000539739 HIST1H2BCP62807 126 aa11.89□□□□□ -0.51
DDB1-216ENST00000539739 RANP62826 216 aaKnown RBP11.89□□□□□ -0.51
DDB1-216ENST00000539739 ZNF616Q08AN1 781 aa11.89□□□□□ -0.51
DDB1-216ENST00000539739 HIST2H2BEQ16778 126 aa11.89□□□□□ -0.51
DDB1-216ENST00000539739 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.89□□□□□ -0.51
DDB1-216ENST00000539739 C1orf194Q5T5A4 169 aa11.89□□□□□ -0.51
DDB1-216ENST00000539739 SPATA3Q8NHX4 192 aa11.89□□□□□ -0.51
DDB1-216ENST00000539739 ORAOV1Q8WV07 137 aa11.89□□□□□ -0.51
DDB1-216ENST00000539739 NPIPB3Q92617 1050 aa11.89□□□□□ -0.51
DDB1-216ENST00000539739 HIST1H2BHQ93079 126 aa11.89□□□□□ -0.51
DDB1-216ENST00000539739 HIST1H2BNQ99877 126 aa11.89□□□□□ -0.51
DDB1-216ENST00000539739 HIST1H2BMQ99879 126 aa11.89□□□□□ -0.51
DDB1-216ENST00000539739 IGHV4OR15-8A0A075B7B6 117 aa11.89□□□□□ -0.51
DDB1-216ENST00000539739 A0A087WW49 117 aa11.89□□□□□ -0.51
DDB1-216ENST00000539739 PPP5D1E7EU14 171 aa11.89□□□□□ -0.51
DDB1-216ENST00000539739 FNDC10F2Z333 226 aa11.89□□□□□ -0.51
DDB1-216ENST00000539739 F8W735 103 aaPredicted RBP11.89□□□□□ -0.51
DDB1-216ENST00000539739 TRBV12-3P01733 135 aa11.89□□□□□ -0.51
DDB1-216ENST00000539739 MYCNOSP40205 109 aa11.89□□□□□ -0.51
DDB1-216ENST00000539739 ARL16Q0P5N6 197 aa11.89□□□□□ -0.51
DDB1-216ENST00000539739 COA6Q5JTJ3 125 aaKnown RBP11.89□□□□□ -0.51
DDB1-216ENST00000539739 COL5A1-AS1Q5SY13 56 aa11.89□□□□□ -0.51
DDB1-216ENST00000539739 HAPLN4Q86UW8 402 aa11.89□□□□□ -0.51
DDB1-216ENST00000539739 RAX2Q96IS3 184 aa11.89□□□□□ -0.51
DDB1-216ENST00000539739 HIST1H2BLQ99880 126 aa11.89□□□□□ -0.51
DDB1-216ENST00000539739 MRPL36Q9P0J6 103 aaKnown RBP11.89□□□□□ -0.51
DDB1-216ENST00000539739 C20orf202A1L168 122 aa11.88□□□□□ -0.51
DDB1-216ENST00000539739 M0R036 132 aa11.88□□□□□ -0.51
DDB1-216ENST00000539739 PF4P02776 101 aa11.88□□□□□ -0.51
DDB1-216ENST00000539739 FABP4P15090 132 aa11.88□□□□□ -0.51
DDB1-216ENST00000539739 SULT1A2P50226 295 aa11.88□□□□□ -0.51
DDB1-216ENST00000539739 RPEL1Q2QD12 228 aa11.88□□□□□ -0.51
DDB1-216ENST00000539739 TMEM183AQ8IXX5 376 aa11.88□□□□□ -0.51
DDB1-216ENST00000539739 DUX3Q96PT4 197 aa11.88□□□□□ -0.51
DDB1-216ENST00000539739 NPVFQ9HCQ7 196 aa11.88□□□□□ -0.51
DDB1-216ENST00000539739 RPH3ALQ9UNE2 315 aa11.88□□□□□ -0.51
DDB1-216ENST00000539739 BMPR1BO00238 502 aa11.87□□□□□ -0.51
DDB1-216ENST00000539739 CTSGP08311 255 aa11.87□□□□□ -0.51
DDB1-216ENST00000539739 OR10J1P30954 320 aa11.87□□□□□ -0.51
DDB1-216ENST00000539739 TMEM144Q7Z5S9 345 aa11.87□□□□□ -0.51
DDB1-216ENST00000539739 OR5C1Q8NGR4 320 aa11.87□□□□□ -0.51
DDB1-216ENST00000539739 SMIM12Q96EX1 92 aa11.87□□□□□ -0.51
DDB1-216ENST00000539739 AQP10Q96PS8 301 aa11.87□□□□□ -0.51
DDB1-216ENST00000539739 VAX2Q9UIW0 290 aa11.87□□□□□ -0.51
DDB1-216ENST00000539739 ZFP92A6NM28 416 aa11.86□□□□□ -0.51
DDB1-216ENST00000539739 FHL3Q13643 280 aa11.86□□□□□ -0.51
DDB1-216ENST00000539739 GUK1Q16774 197 aa11.86□□□□□ -0.51
DDB1-216ENST00000539739 ZNF674Q2M3X9 581 aa11.86□□□□□ -0.51
DDB1-216ENST00000539739 RNASE8Q8TDE3 154 aaKnown RBP11.86□□□□□ -0.51
DDB1-216ENST00000539739 CHRDL1Q9BU40 450 aa11.86□□□□□ -0.51
DDB1-216ENST00000539739 TMEM147Q9BVK8 224 aa11.86□□□□□ -0.51
DDB1-216ENST00000539739 CSTL1Q9H114 145 aa11.86□□□□□ -0.51
DDB1-216ENST00000539739 TMEM231Q9H6L2 316 aa11.86□□□□□ -0.51
DDB1-216ENST00000539739 IGLC1P0CG04 106 aa11.86□□□□□ -0.51
DDB1-216ENST00000539739 HOXD3P31249 432 aaPredicted RBP11.86□□□□□ -0.51
DDB1-216ENST00000539739 FAM106AQ4KMX7 169 aa11.86□□□□□ -0.51
DDB1-216ENST00000539739 PBDC1Q9BVG4 233 aa11.86□□□□□ -0.51
DDB1-216ENST00000539739 ADMP35318 185 aa11.85□□□□□ -0.51
DDB1-216ENST00000539739 TEPPQ6URK8 271 aa11.85□□□□□ -0.51
DDB1-216ENST00000539739 GPHB5Q86YW7 130 aa11.85□□□□□ -0.51
DDB1-216ENST00000539739 THAP8Q8NA92 274 aa11.85□□□□□ -0.51
DDB1-216ENST00000539739 ISOC2Q96AB3 205 aa11.85□□□□□ -0.51
DDB1-216ENST00000539739 NUDT11Q96G61 164 aa11.85□□□□□ -0.51
DDB1-216ENST00000539739 TRGV9Q99603 122 aa11.85□□□□□ -0.51
DDB1-216ENST00000539739 DNAJC4Q9NNZ3 241 aa11.85□□□□□ -0.51
DDB1-216ENST00000539739 IGHV3-35A0A0C4DH35 117 aa11.84□□□□□ -0.51
DDB1-216ENST00000539739 IGKV1-17P01599 117 aa11.84□□□□□ -0.51
DDB1-216ENST00000539739 SLURP1P55000 103 aa11.84□□□□□ -0.51
DDB1-216ENST00000539739 YPEL3P61236 119 aaPredicted RBP11.84□□□□□ -0.51
DDB1-216ENST00000539739 VWC2Q2TAL6 325 aa11.84□□□□□ -0.51
DDB1-216ENST00000539739 TIGITQ495A1 244 aa11.84□□□□□ -0.51
DDB1-216ENST00000539739 TREML4Q6UXN2 200 aa11.84□□□□□ -0.51
DDB1-216ENST00000539739 ATP5SQ99766 215 aa11.84□□□□□ -0.51
DDB1-216ENST00000539739 HRH4Q9H3N8 390 aa11.84□□□□□ -0.51
DDB1-216ENST00000539739 B4DEV8 164 aa11.83□□□□□ -0.52
DDB1-216ENST00000539739 NDUFA4O00483 81 aa11.83□□□□□ -0.52
DDB1-216ENST00000539739 FHITP49789 147 aa11.83□□□□□ -0.52
DDB1-216ENST00000539739 RAB31Q13636 194 aa11.83□□□□□ -0.52
DDB1-216ENST00000539739 KLF5Q13887 457 aaPredicted RBP11.83□□□□□ -0.52
DDB1-216ENST00000539739 Q8WTZ3 238 aa11.83□□□□□ -0.52
DDB1-216ENST00000539739 C20orf144Q9BQM9 153 aa11.83□□□□□ -0.52
DDB1-216ENST00000539739 SMIM3Q9BZL3 60 aa11.83□□□□□ -0.52
DDB1-216ENST00000539739 CYTL1Q9NRR1 136 aa11.83□□□□□ -0.52
DDB1-216ENST00000539739 IGKV1D-37A0A075B6S9 117 aa11.82□□□□□ -0.52
DDB1-216ENST00000539739 UBE2L5PA0A1B0GUS4 154 aa11.82□□□□□ -0.52
DDB1-216ENST00000539739 TSPAN15O95858 294 aa11.82□□□□□ -0.52
DDB1-216ENST00000539739 IFNA5P01569 189 aa11.82□□□□□ -0.52
DDB1-216ENST00000539739 TMED6Q8WW62 240 aa11.82□□□□□ -0.52
DDB1-216ENST00000539739 PARD6GQ9BYG4 376 aaPredicted RBP11.82□□□□□ -0.52
DDB1-216ENST00000539739 SLC35B3Q9H1N7 401 aa11.82□□□□□ -0.52
DDB1-216ENST00000539739 FBXL17Q9UF56 701 aa11.82□□□□□ -0.52
DDB1-216ENST00000539739 WNK1Q9H4A3 2382 aa11.82□□□□□ -0.52
DDB1-216ENST00000539739 IGKV1OR2-108A0A075B7D4 117 aa11.82□□□□□ -0.52
DDB1-216ENST00000539739 ZNF320A2RRD8 509 aa11.82□□□□□ -0.52
DDB1-216ENST00000539739 UMAD1C9J7I0 102 aa11.82□□□□□ -0.52
DDB1-216ENST00000539739 MPDU1O75352 247 aa11.82□□□□□ -0.52
DDB1-216ENST00000539739 TOMM40O96008 361 aa11.82□□□□□ -0.52
DDB1-216ENST00000539739 NBEAP1P0C6P0 100 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms