RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 RBFOX3A6NFN3 312 aa12.35□□□□□ -0.43
TRAF3-204ENST00000539721 APOHP02749 345 aaPredicted RBP12.35□□□□□ -0.43
TRAF3-204ENST00000539721 SYNJ2BPP57105 145 aa12.35□□□□□ -0.43
TRAF3-204ENST00000539721 TM4SF20Q53R12 229 aa12.35□□□□□ -0.43
TRAF3-204ENST00000539721 REC114Q7Z4M0 266 aa12.35□□□□□ -0.43
TRAF3-204ENST00000539721 C1QL4Q86Z23 238 aa12.35□□□□□ -0.43
TRAF3-204ENST00000539721 DAZ1Q9NQZ3 744 aaKnown RBP12.35□□□□□ -0.43
TRAF3-204ENST00000539721 TMEM14CQ9P0S9 112 aa12.35□□□□□ -0.43
TRAF3-204ENST00000539721 U3KQE9 123 aa12.35□□□□□ -0.43
TRAF3-204ENST00000539721 JMJD1CQ15652 2540 aa12.35□□□□□ -0.43
TRAF3-204ENST00000539721 IGHV3-66A0A0C4DH42 116 aa12.34□□□□□ -0.43
TRAF3-204ENST00000539721 K7EMT4 169 aa12.34□□□□□ -0.43
TRAF3-204ENST00000539721 BUB3O43684 328 aa12.34□□□□□ -0.43
TRAF3-204ENST00000539721 UBE2G2P60604 165 aa12.34□□□□□ -0.43
TRAF3-204ENST00000539721 PMS2P11Q13670 270 aa12.34□□□□□ -0.43
TRAF3-204ENST00000539721 NSUN5P1Q3KNT7 163 aa12.34□□□□□ -0.43
TRAF3-204ENST00000539721 AWAT1Q58HT5 328 aa12.34□□□□□ -0.43
TRAF3-204ENST00000539721 PRIMA1Q86XR5 153 aa12.34□□□□□ -0.43
TRAF3-204ENST00000539721 OR8I2Q8N0Y5 310 aa12.34□□□□□ -0.43
TRAF3-204ENST00000539721 FXYD5Q96DB9 178 aa12.34□□□□□ -0.43
TRAF3-204ENST00000539721 RAX2Q96IS3 184 aa12.34□□□□□ -0.43
TRAF3-204ENST00000539721 CITED4Q96RK1 184 aa12.34□□□□□ -0.43
TRAF3-204ENST00000539721 TMEM231Q9H6L2 316 aa12.34□□□□□ -0.43
TRAF3-204ENST00000539721 LOC102723971A0A1B0GUV8 181 aa12.33□□□□□ -0.44
TRAF3-204ENST00000539721 LGALS9O00182 355 aa12.33□□□□□ -0.44
TRAF3-204ENST00000539721 SNRPCP09234 159 aaKnown RBP12.33□□□□□ -0.44
TRAF3-204ENST00000539721 BCL2P10415 239 aa12.33□□□□□ -0.44
TRAF3-204ENST00000539721 RPL7P18124 248 aaKnown RBP12.33□□□□□ -0.44
TRAF3-204ENST00000539721 SRSF3P84103 164 aaKnown RBP12.33□□□□□ -0.44
TRAF3-204ENST00000539721 KLF5Q13887 457 aaPredicted RBP12.33□□□□□ -0.44
TRAF3-204ENST00000539721 KRTAP24-1Q3LI83 254 aa12.33□□□□□ -0.44
TRAF3-204ENST00000539721 OR4F17Q8NGA8 305 aa12.33□□□□□ -0.44
TRAF3-204ENST00000539721 OR4F4Q96R69 305 aa12.33□□□□□ -0.44
TRAF3-204ENST00000539721 RARRES2Q99969 163 aa12.33□□□□□ -0.44
TRAF3-204ENST00000539721 IGHV7-4-1A0A0J9YVY3 117 aa12.33□□□□□ -0.44
TRAF3-204ENST00000539721 CCL24O00175 119 aa12.33□□□□□ -0.44
TRAF3-204ENST00000539721 PAGE4O60829 102 aa12.33□□□□□ -0.44
TRAF3-204ENST00000539721 ZNF506Q5JVG8 444 aa12.33□□□□□ -0.44
TRAF3-204ENST00000539721 C1orf194Q5T5A4 169 aa12.33□□□□□ -0.44
TRAF3-204ENST00000539721 NDUFA11Q86Y39 141 aa12.33□□□□□ -0.44
TRAF3-204ENST00000539721 EIF4E3Q8N5X7 224 aaKnown RBP12.33□□□□□ -0.44
TRAF3-204ENST00000539721 SUN5Q8TC36 379 aa12.33□□□□□ -0.44
TRAF3-204ENST00000539721 TREM1Q9NP99 234 aa12.33□□□□□ -0.44
TRAF3-204ENST00000539721 A0A1W2PS18 150 aa12.32□□□□□ -0.44
TRAF3-204ENST00000539721 ADARB2-AS1A8MUL3 147 aa12.32□□□□□ -0.44
TRAF3-204ENST00000539721 A8MWP6 167 aa12.32□□□□□ -0.44
TRAF3-204ENST00000539721 MRPS12O15235 138 aaKnown RBP12.32□□□□□ -0.44
TRAF3-204ENST00000539721 HIST1H1EP10412 219 aaKnown RBP12.32□□□□□ -0.44
TRAF3-204ENST00000539721 PEA15Q15121 130 aa12.32□□□□□ -0.44
TRAF3-204ENST00000539721 UQCC3Q6UW78 93 aa12.32□□□□□ -0.44
TRAF3-204ENST00000539721 RXFP4Q8TDU9 374 aa12.32□□□□□ -0.44
TRAF3-204ENST00000539721 BLNKQ8WV28 456 aa12.32□□□□□ -0.44
TRAF3-204ENST00000539721 GRAMD2BQ96HH9 432 aa12.32□□□□□ -0.44
TRAF3-204ENST00000539721 GPR82Q96P67 336 aa12.32□□□□□ -0.44
TRAF3-204ENST00000539721 NBEAP1P0C6P0 100 aa12.31□□□□□ -0.44
TRAF3-204ENST00000539721 TAGLN2P37802 199 aaKnown RBP12.31□□□□□ -0.44
TRAF3-204ENST00000539721 FHL3Q13643 280 aa12.31□□□□□ -0.44
TRAF3-204ENST00000539721 ICAM4Q14773 271 aa12.31□□□□□ -0.44
TRAF3-204ENST00000539721 CST9LP1Q5W188 147 aa12.31□□□□□ -0.44
TRAF3-204ENST00000539721 C16orf54Q6UWD8 224 aa12.31□□□□□ -0.44
TRAF3-204ENST00000539721 SMPXQ9UHP9 88 aa12.31□□□□□ -0.44
TRAF3-204ENST00000539721 VAX2Q9UIW0 290 aa12.31□□□□□ -0.44
TRAF3-204ENST00000539721 TMEM213A2RRL7 107 aa12.3□□□□□ -0.44
TRAF3-204ENST00000539721 H3BQ15 152 aa12.3□□□□□ -0.44
TRAF3-204ENST00000539721 H3BTX0 84 aa12.3□□□□□ -0.44
TRAF3-204ENST00000539721 IGLC2P0DOY2 106 aa12.3□□□□□ -0.44
TRAF3-204ENST00000539721 ATF4P18848 351 aaPredicted RBP12.3□□□□□ -0.44
TRAF3-204ENST00000539721 EDN2P20800 178 aa12.3□□□□□ -0.44
TRAF3-204ENST00000539721 DLX4Q92988 240 aaPredicted RBP12.3□□□□□ -0.44
TRAF3-204ENST00000539721 RHPN1-AS1Q9BWJ2 59 aa12.3□□□□□ -0.44
TRAF3-204ENST00000539721 ZNF586Q9NXT0 402 aa12.3□□□□□ -0.44
TRAF3-204ENST00000539721 YTHDF2Q9Y5A9 579 aaKnown RBP12.3□□□□□ -0.44
TRAF3-204ENST00000539721 FAM74A7A6NL05 159 aa12.3□□□□□ -0.44
TRAF3-204ENST00000539721 CD5P06127 495 aa12.3□□□□□ -0.44
TRAF3-204ENST00000539721 BMI1P35226 326 aa12.3□□□□□ -0.44
TRAF3-204ENST00000539721 GALR1P47211 349 aa12.3□□□□□ -0.44
TRAF3-204ENST00000539721 MEF2BQ02080 365 aaPredicted RBP12.3□□□□□ -0.44
TRAF3-204ENST00000539721 GLMPQ8WWB7 406 aa12.3□□□□□ -0.44
TRAF3-204ENST00000539721 PEMTQ9UBM1 199 aa12.3□□□□□ -0.44
TRAF3-204ENST00000539721 ARL2-SNX15V9GYD0 113 aa12.3□□□□□ -0.44
TRAF3-204ENST00000539721 C11orf94C9JXX5 98 aa12.29□□□□□ -0.44
TRAF3-204ENST00000539721 CHEK1O14757 476 aa12.29□□□□□ -0.44
TRAF3-204ENST00000539721 ATP5G3P48201 142 aa12.29□□□□□ -0.44
TRAF3-204ENST00000539721 SIGLEC15Q6ZMC9 328 aa12.29□□□□□ -0.44
TRAF3-204ENST00000539721 SMAD5-AS1Q9Y6J3 95 aa12.29□□□□□ -0.44
TRAF3-204ENST00000539721 A0A1W2PRE2 83 aa12.28□□□□□ -0.44
TRAF3-204ENST00000539721 C2orf70A6NJV1 201 aa12.28□□□□□ -0.44
TRAF3-204ENST00000539721 ZNF785A8K8V0 405 aa12.28□□□□□ -0.44
TRAF3-204ENST00000539721 OR9G4Q8NGQ1 327 aa12.28□□□□□ -0.44
TRAF3-204ENST00000539721 ELOVL1Q9BW60 279 aa12.28□□□□□ -0.44
TRAF3-204ENST00000539721 SMDT1Q9H4I9 107 aa12.28□□□□□ -0.44
TRAF3-204ENST00000539721 TRBV19A0A075B6N1 114 aa12.28□□□□□ -0.44
TRAF3-204ENST00000539721 C9JQL5 133 aa12.28□□□□□ -0.44
TRAF3-204ENST00000539721 ATP6V1G1O75348 118 aa12.28□□□□□ -0.44
TRAF3-204ENST00000539721 MYCNOSP40205 109 aa12.28□□□□□ -0.44
TRAF3-204ENST00000539721 RANP62826 216 aaKnown RBP12.28□□□□□ -0.44
TRAF3-204ENST00000539721 C17orf77Q96MU5 243 aa12.28□□□□□ -0.44
TRAF3-204ENST00000539721 CITED1Q99966 193 aa12.28□□□□□ -0.44
TRAF3-204ENST00000539721 TXNDC17Q9BRA2 123 aa12.28□□□□□ -0.44
TRAF3-204ENST00000539721 A0A087X0K7 114 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms