RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 LCN15Q6UWW0 184 aa9.8□□□□□ -0.84
CCDC42-202ENST00000539522 EIF4E3Q8N5X7 224 aaKnown RBP9.8□□□□□ -0.84
CCDC42-202ENST00000539522 OR51G1Q8NGK1 321 aa9.8□□□□□ -0.84
CCDC42-202ENST00000539522 C20orf24Q9BUV8 137 aa9.8□□□□□ -0.84
CCDC42-202ENST00000539522 U3KQE9 123 aa9.8□□□□□ -0.84
CCDC42-202ENST00000539522 MAP1LC3B2A6NCE7 125 aa9.79□□□□□ -0.84
CCDC42-202ENST00000539522 PRB2P02812 416 aaPredicted RBP9.79□□□□□ -0.84
CCDC42-202ENST00000539522 OR5G3P0C626 314 aa9.79□□□□□ -0.84
CCDC42-202ENST00000539522 ORM2P19652 201 aa9.79□□□□□ -0.84
CCDC42-202ENST00000539522 DEFB114Q30KQ6 69 aa9.79□□□□□ -0.84
CCDC42-202ENST00000539522 FAM78BQ5VT40 261 aa9.79□□□□□ -0.84
CCDC42-202ENST00000539522 C10orf113Q5VZT2 155 aa9.79□□□□□ -0.84
CCDC42-202ENST00000539522 S100A7AQ86SG5 101 aa9.79□□□□□ -0.84
CCDC42-202ENST00000539522 TMEM37Q8WXS4 190 aa9.79□□□□□ -0.84
CCDC42-202ENST00000539522 MCRIP2Q9BUT9 160 aaKnown RBP9.79□□□□□ -0.84
CCDC42-202ENST00000539522 MRPL32Q9BYC8 188 aaKnown RBP9.79□□□□□ -0.84
CCDC42-202ENST00000539522 MAP1LC3BQ9GZQ8 125 aa9.79□□□□□ -0.84
CCDC42-202ENST00000539522 DAZ1Q9NQZ3 744 aaKnown RBP9.79□□□□□ -0.84
CCDC42-202ENST00000539522 TECRQ9NZ01 308 aaKnown RBP9.79□□□□□ -0.84
CCDC42-202ENST00000539522 SMPXQ9UHP9 88 aa9.79□□□□□ -0.84
CCDC42-202ENST00000539522 FUT9Q9Y231 359 aa9.79□□□□□ -0.84
CCDC42-202ENST00000539522 IGHV3OR16-13A0A075B7E8 117 aa9.78□□□□□ -0.84
CCDC42-202ENST00000539522 IGHV3-74A0A0B4J1X5 117 aa9.78□□□□□ -0.84
CCDC42-202ENST00000539522 IGHV7-4-1A0A0J9YVY3 117 aa9.78□□□□□ -0.84
CCDC42-202ENST00000539522 CHEK1O14757 476 aa9.78□□□□□ -0.84
CCDC42-202ENST00000539522 CXorf1O96002 111 aa9.78□□□□□ -0.84
CCDC42-202ENST00000539522 CRYBB3P26998 211 aa9.78□□□□□ -0.84
CCDC42-202ENST00000539522 S100A7P31151 101 aa9.78□□□□□ -0.84
CCDC42-202ENST00000539522 TAS2R45P59539 299 aa9.78□□□□□ -0.84
CCDC42-202ENST00000539522 CCL20P78556 96 aa9.78□□□□□ -0.84
CCDC42-202ENST00000539522 CD300EQ496F6 205 aaPredicted RBP9.78□□□□□ -0.84
CCDC42-202ENST00000539522 FAM90A2PQ658T7 463 aa9.78□□□□□ -0.84
CCDC42-202ENST00000539522 UQCC3Q6UW78 93 aa9.78□□□□□ -0.84
CCDC42-202ENST00000539522 PATE2Q6UY27 113 aa9.78□□□□□ -0.84
CCDC42-202ENST00000539522 OR1B1Q8NGR6 318 aa9.78□□□□□ -0.84
CCDC42-202ENST00000539522 PBDC1Q9BVG4 233 aa9.78□□□□□ -0.84
CCDC42-202ENST00000539522 SLC25A22Q9H936 323 aa9.78□□□□□ -0.84
CCDC42-202ENST00000539522 SEPSECSQ9HD40 501 aaKnown RBP9.78□□□□□ -0.84
CCDC42-202ENST00000539522 PEMTQ9UBM1 199 aa9.78□□□□□ -0.84
CCDC42-202ENST00000539522 UFC1Q9Y3C8 167 aa9.78□□□□□ -0.84
CCDC42-202ENST00000539522 DNAH9Q9NYC9 4486 aa9.78□□□□□ -0.84
CCDC42-202ENST00000539522 IGHV3-66A0A0C4DH42 116 aa9.77□□□□□ -0.85
CCDC42-202ENST00000539522 ZNF785A8K8V0 405 aa9.77□□□□□ -0.85
CCDC42-202ENST00000539522 IL4P05112 153 aa9.77□□□□□ -0.85
CCDC42-202ENST00000539522 STAG3L2P0CL84 134 aa9.77□□□□□ -0.85
CCDC42-202ENST00000539522 STAG3L3P0CL85 134 aa9.77□□□□□ -0.85
CCDC42-202ENST00000539522 PPT1P50897 306 aa9.77□□□□□ -0.85
CCDC42-202ENST00000539522 PEA15Q15121 130 aa9.77□□□□□ -0.85
CCDC42-202ENST00000539522 SSX7Q7RTT5 188 aa9.77□□□□□ -0.85
CCDC42-202ENST00000539522 RNF125Q96EQ8 232 aa9.77□□□□□ -0.85
CCDC42-202ENST00000539522 C17orf77Q96MU5 243 aa9.77□□□□□ -0.85
CCDC42-202ENST00000539522 CITED4Q96RK1 184 aa9.77□□□□□ -0.85
CCDC42-202ENST00000539522 ELOVL1Q9BW60 279 aa9.77□□□□□ -0.85
CCDC42-202ENST00000539522 MRPL27Q9P0M9 148 aaKnown RBP9.77□□□□□ -0.85
CCDC42-202ENST00000539522 HIGD1AQ9Y241 93 aa9.77□□□□□ -0.85
CCDC42-202ENST00000539522 A0A1B0GV50 99 aa9.76□□□□□ -0.85
CCDC42-202ENST00000539522 RBFOX3A6NFN3 312 aa9.76□□□□□ -0.85
CCDC42-202ENST00000539522 HMGB3O15347 200 aaKnown RBP9.76□□□□□ -0.85
CCDC42-202ENST00000539522 TAGLN2P37802 199 aaKnown RBP9.76□□□□□ -0.85
CCDC42-202ENST00000539522 PSMB3P49720 205 aa9.76□□□□□ -0.85
CCDC42-202ENST00000539522 INSL3P51460 131 aa9.76□□□□□ -0.85
CCDC42-202ENST00000539522 FGF8P55075 233 aaPredicted RBP9.76□□□□□ -0.85
CCDC42-202ENST00000539522 LYZP61626 148 aa9.76□□□□□ -0.85
CCDC42-202ENST00000539522 MIR17HGQ75NE6 70 aa9.76□□□□□ -0.85
CCDC42-202ENST00000539522 LINC00305Q7Z4B0 112 aa9.76□□□□□ -0.85
CCDC42-202ENST00000539522 TMEM61Q8N0U2 210 aa9.76□□□□□ -0.85
CCDC42-202ENST00000539522 STXBP6Q8NFX7 210 aa9.76□□□□□ -0.85
CCDC42-202ENST00000539522 FAM210AQ96ND0 272 aa9.76□□□□□ -0.85
CCDC42-202ENST00000539522 RHPN1-AS1Q9BWJ2 59 aa9.76□□□□□ -0.85
CCDC42-202ENST00000539522 SMDT1Q9H4I9 107 aa9.76□□□□□ -0.85
CCDC42-202ENST00000539522 DOK5Q9P104 306 aa9.76□□□□□ -0.85
CCDC42-202ENST00000539522 RNF24Q9Y225 148 aa9.76□□□□□ -0.85
CCDC42-202ENST00000539522 IFNA1P01562 189 aa9.75□□□□□ -0.85
CCDC42-202ENST00000539522 GUK1Q16774 197 aa9.75□□□□□ -0.85
CCDC42-202ENST00000539522 KHDC3LQ587J8 217 aa9.75□□□□□ -0.85
CCDC42-202ENST00000539522 SPATA31B1PQ5VZV4 182 aa9.75□□□□□ -0.85
CCDC42-202ENST00000539522 PQLC2Q6ZP29 291 aa9.75□□□□□ -0.85
CCDC42-202ENST00000539522 METTL26Q96S19 204 aa9.75□□□□□ -0.85
CCDC42-202ENST00000539522 EIF5A2Q9GZV4 153 aaKnown RBP9.75□□□□□ -0.85
CCDC42-202ENST00000539522 AURKAIP1Q9NWT8 199 aaPredicted RBP9.75□□□□□ -0.85
CCDC42-202ENST00000539522 BUB3O43684 328 aa9.74□□□□□ -0.85
CCDC42-202ENST00000539522 ATP6V1G1O75348 118 aa9.74□□□□□ -0.85
CCDC42-202ENST00000539522 CD5P06127 495 aa9.74□□□□□ -0.85
CCDC42-202ENST00000539522 S100A1P23297 94 aa9.74□□□□□ -0.85
CCDC42-202ENST00000539522 GCHFRP30047 84 aa9.74□□□□□ -0.85
CCDC42-202ENST00000539522 MORN5Q5VZ52 161 aa9.74□□□□□ -0.85
CCDC42-202ENST00000539522 Q8N1Y9 231 aa9.74□□□□□ -0.85
CCDC42-202ENST00000539522 GLMPQ8WWB7 406 aa9.74□□□□□ -0.85
CCDC42-202ENST00000539522 PRR25Q96S07 402 aa9.74□□□□□ -0.85
CCDC42-202ENST00000539522 SCRT1Q9BWW7 348 aa9.74□□□□□ -0.85
CCDC42-202ENST00000539522 TMEM167BQ9NRX6 74 aa9.74□□□□□ -0.85
CCDC42-202ENST00000539522 GNG13Q9P2W3 67 aa9.74□□□□□ -0.85
CCDC42-202ENST00000539522 RABAC1Q9UI14 185 aa9.74□□□□□ -0.85
CCDC42-202ENST00000539522 ZNF256Q9Y2P7 627 aaPredicted RBP9.74□□□□□ -0.85
CCDC42-202ENST00000539522 TRAV5A0A0B4J249 113 aa9.73□□□□□ -0.85
CCDC42-202ENST00000539522 K7EIL1 84 aa9.73□□□□□ -0.85
CCDC42-202ENST00000539522 EIF3GO75821 320 aaKnown RBP eCLIP9.73□□□□□ -0.85
CCDC42-202ENST00000539522 ARL14EPLP0DKL9 152 aa9.73□□□□□ -0.85
CCDC42-202ENST00000539522 NPPCP23582 126 aa9.73□□□□□ -0.85
CCDC42-202ENST00000539522 ZNF506Q5JVG8 444 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms