RNA–Protein interactions for RNA: ENST00000539204.5

YBX3-207, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 649 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-207ENST00000539204 CMTM1Q8IZ96 169 aa8.31□□□□□ -1.08
YBX3-207ENST00000539204 C12orf45Q8N5I9 185 aaPredicted RBP8.31□□□□□ -1.08
YBX3-207ENST00000539204 ZFAND1Q8TCF1 268 aa8.31□□□□□ -1.08
YBX3-207ENST00000539204 MRPL36Q9P0J6 103 aaKnown RBP8.31□□□□□ -1.08
YBX3-207ENST00000539204 SHPKQ9UHJ6 478 aa8.31□□□□□ -1.08
YBX3-207ENST00000539204 ZNF705GA8MUZ8 300 aaPredicted RBP8.3□□□□□ -1.08
YBX3-207ENST00000539204 BUB3O43684 328 aa8.3□□□□□ -1.08
YBX3-207ENST00000539204 PRM2P04554 102 aa8.3□□□□□ -1.08
YBX3-207ENST00000539204 OPRK1P41145 380 aa8.3□□□□□ -1.08
YBX3-207ENST00000539204 NKX2-5P52952 324 aaPredicted RBP8.3□□□□□ -1.08
YBX3-207ENST00000539204 C4orf46Q504U0 113 aa8.3□□□□□ -1.08
YBX3-207ENST00000539204 SPINK9Q5DT21 86 aa8.3□□□□□ -1.08
YBX3-207ENST00000539204 FAM78BQ5VT40 261 aa8.3□□□□□ -1.08
YBX3-207ENST00000539204 EBLN2Q6P2I7 272 aa8.3□□□□□ -1.08
YBX3-207ENST00000539204 MARCH1Q8TCQ1 289 aa8.3□□□□□ -1.08
YBX3-207ENST00000539204 MITD1Q8WV92 249 aa8.3□□□□□ -1.08
YBX3-207ENST00000539204 GNPNAT1Q96EK6 184 aaPredicted RBP8.3□□□□□ -1.08
YBX3-207ENST00000539204 EHFQ9NZC4 300 aa8.3□□□□□ -1.08
YBX3-207ENST00000539204 MGAT4CQ9UBM8 478 aa8.3□□□□□ -1.08
YBX3-207ENST00000539204 C9orf170A2RU37 121 aa8.29□□□□□ -1.08
YBX3-207ENST00000539204 RGS13O14921 159 aa8.29□□□□□ -1.08
YBX3-207ENST00000539204 UCP3P55916 312 aa8.29□□□□□ -1.08
YBX3-207ENST00000539204 HAMPP81172 84 aa8.29□□□□□ -1.08
YBX3-207ENST00000539204 OR5I1Q13606 314 aa8.29□□□□□ -1.08
YBX3-207ENST00000539204 LPCAT3Q6P1A2 487 aa8.29□□□□□ -1.08
YBX3-207ENST00000539204 COQ8AQ8NI60 647 aa8.29□□□□□ -1.08
YBX3-207ENST00000539204 SEC22AQ96IW7 307 aa8.29□□□□□ -1.08
YBX3-207ENST00000539204 IGF2BP2-AS1Q96M15 143 aa8.29□□□□□ -1.08
YBX3-207ENST00000539204 RTBDNQ9BSG5 229 aaPredicted RBP8.29□□□□□ -1.08
YBX3-207ENST00000539204 FNDC4Q9H6D8 234 aaPredicted RBP8.29□□□□□ -1.08
YBX3-207ENST00000539204 LRP1Q07954 4544 aaKnown RBP8.28□□□□□ -1.08
YBX3-207ENST00000539204 INS-IGF2F8WCM5 200 aa8.28□□□□□ -1.08
YBX3-207ENST00000539204 G3V3Q6 166 aa8.28□□□□□ -1.08
YBX3-207ENST00000539204 B2MP61769 119 aa8.28□□□□□ -1.08
YBX3-207ENST00000539204 IFITM2Q01629 132 aa8.28□□□□□ -1.08
YBX3-207ENST00000539204 TMED4Q7Z7H5 227 aa8.28□□□□□ -1.08
YBX3-207ENST00000539204 OR1S2Q8NGQ3 325 aa8.28□□□□□ -1.08
YBX3-207ENST00000539204 DEFB104AQ8WTQ1 72 aa8.28□□□□□ -1.08
YBX3-207ENST00000539204 PAIP2BQ9ULR5 123 aaKnown RBP8.28□□□□□ -1.08
YBX3-207ENST00000539204 MRPS16Q9Y3D3 137 aaKnown RBP8.28□□□□□ -1.08
YBX3-207ENST00000539204 TRAV26-1A0A087WT03 109 aa8.27□□□□□ -1.09
YBX3-207ENST00000539204 GPR31O00270 319 aa8.27□□□□□ -1.09
YBX3-207ENST00000539204 SFT2D2O95562 160 aa8.27□□□□□ -1.09
YBX3-207ENST00000539204 PLA2G1BP04054 148 aaKnown RBP8.27□□□□□ -1.09
YBX3-207ENST00000539204 IL4P05112 153 aa8.27□□□□□ -1.09
YBX3-207ENST00000539204 RNASE2P10153 161 aaKnown RBP8.27□□□□□ -1.09
YBX3-207ENST00000539204 TSPOP30536 169 aa8.27□□□□□ -1.09
YBX3-207ENST00000539204 PSMB3P49720 205 aa8.27□□□□□ -1.09
YBX3-207ENST00000539204 PAX9P55771 341 aa8.27□□□□□ -1.09
YBX3-207ENST00000539204 YPEL3P61236 119 aaPredicted RBP8.27□□□□□ -1.09
YBX3-207ENST00000539204 PPP1R1AQ13522 171 aa8.27□□□□□ -1.09
YBX3-207ENST00000539204 SLC35G3Q8N808 338 aa8.27□□□□□ -1.09
YBX3-207ENST00000539204 OR2T35Q8NGX2 323 aa8.27□□□□□ -1.09
YBX3-207ENST00000539204 RXFP4Q8TDU9 374 aa8.27□□□□□ -1.09
YBX3-207ENST00000539204 ZNF2Q9BSG1 426 aaPredicted RBP8.27□□□□□ -1.09
YBX3-207ENST00000539204 FAM212BQ9NTI7 297 aaPredicted RBP8.27□□□□□ -1.09
YBX3-207ENST00000539204 A0A087WTM6 91 aa8.26□□□□□ -1.09
YBX3-207ENST00000539204 A0A0J9YX75 114 aa8.26□□□□□ -1.09
YBX3-207ENST00000539204 HMSDA8MTL9 139 aa8.26□□□□□ -1.09
YBX3-207ENST00000539204 F6UB75 175 aa8.26□□□□□ -1.09
YBX3-207ENST00000539204 IGLC1P0CG04 106 aa8.26□□□□□ -1.09
YBX3-207ENST00000539204 M6PRP20645 277 aa8.26□□□□□ -1.09
YBX3-207ENST00000539204 H2BFSP57053 126 aa8.26□□□□□ -1.09
YBX3-207ENST00000539204 C9orf62Q8N4C0 152 aa8.26□□□□□ -1.09
YBX3-207ENST00000539204 OR11H4Q8NGC9 324 aa8.26□□□□□ -1.09
YBX3-207ENST00000539204 C14orf166Q9Y224 244 aaKnown RBP8.26□□□□□ -1.09
YBX3-207ENST00000539204 A0A0J9YY99 117 aa8.25□□□□□ -1.09
YBX3-207ENST00000539204 SMLR1H3BR10 107 aa8.25□□□□□ -1.09
YBX3-207ENST00000539204 GOSR2O14653 212 aa8.25□□□□□ -1.09
YBX3-207ENST00000539204 DNAH10OSP0CZ25 163 aa8.25□□□□□ -1.09
YBX3-207ENST00000539204 RD3LP0DJH9 198 aa8.25□□□□□ -1.09
YBX3-207ENST00000539204 PGAM2P15259 253 aa8.25□□□□□ -1.09
YBX3-207ENST00000539204 AKR1C4P17516 323 aa8.25□□□□□ -1.09
YBX3-207ENST00000539204 AZU1P20160 251 aa8.25□□□□□ -1.09
YBX3-207ENST00000539204 S100GP29377 79 aa8.25□□□□□ -1.09
YBX3-207ENST00000539204 OR10J1P30954 320 aa8.25□□□□□ -1.09
YBX3-207ENST00000539204 SUPT4H1P63272 117 aaKnown RBP8.25□□□□□ -1.09
YBX3-207ENST00000539204 FGL1Q08830 312 aa8.25□□□□□ -1.09
YBX3-207ENST00000539204 Q5BKY6 102 aa8.25□□□□□ -1.09
YBX3-207ENST00000539204 NFE4Q86UQ8 179 aa8.25□□□□□ -1.09
YBX3-207ENST00000539204 PDCD10Q9BUL8 212 aa8.25□□□□□ -1.09
YBX3-207ENST00000539204 ENY2Q9NPA8 101 aa8.25□□□□□ -1.09
YBX3-207ENST00000539204 PFDN2Q9UHV9 154 aa8.25□□□□□ -1.09
YBX3-207ENST00000539204 TNFRSF18Q9Y5U5 241 aa8.25□□□□□ -1.09
YBX3-207ENST00000539204 PLAC8L1A1L4L8 177 aa8.24□□□□□ -1.09
YBX3-207ENST00000539204 CRYM-AS1A6NIL9 109 aa8.24□□□□□ -1.09
YBX3-207ENST00000539204 SIVA1O15304 175 aa8.24□□□□□ -1.09
YBX3-207ENST00000539204 INSP01308 110 aa8.24□□□□□ -1.09
YBX3-207ENST00000539204 IGKV1-39P01597 117 aa8.24□□□□□ -1.09
YBX3-207ENST00000539204 IGKV1D-39P04432 117 aa8.24□□□□□ -1.09
YBX3-207ENST00000539204 RND3P61587 244 aa8.24□□□□□ -1.09
YBX3-207ENST00000539204 CYCSP99999 105 aaKnown RBP8.24□□□□□ -1.09
YBX3-207ENST00000539204 LGALSLQ3ZCW2 172 aaPredicted RBP8.24□□□□□ -1.09
YBX3-207ENST00000539204 PRSS54Q6PEW0 395 aa8.24□□□□□ -1.09
YBX3-207ENST00000539204 TMEM70Q9BUB7 260 aa8.24□□□□□ -1.09
YBX3-207ENST00000539204 RPRMQ9NS64 109 aa8.24□□□□□ -1.09
YBX3-207ENST00000539204 DOK5Q9P104 306 aa8.24□□□□□ -1.09
YBX3-207ENST00000539204 KCNIP3Q9Y2W7 256 aa8.24□□□□□ -1.09
YBX3-207ENST00000539204 TIMM8BQ9Y5J9 83 aaPredicted RBP8.24□□□□□ -1.09
YBX3-207ENST00000539204 DNAH8Q96JB1 4490 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms