RNA–Protein interactions for RNA: ENST00000538995.1

RTN3-209, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-209ENST00000538995 SLC25A39Q9BZJ4 359 aaPredicted RBP8.38□□□□□ -1.07
RTN3-209ENST00000538995 RPRMQ9NS64 109 aa8.38□□□□□ -1.07
RTN3-209ENST00000538995 PTTG2Q9NZH5 202 aa8.38□□□□□ -1.07
RTN3-209ENST00000538995 AGRNO00468 2067 aa8.38□□□□□ -1.07
RTN3-209ENST00000538995 C5orf51A6NDU8 294 aa8.37□□□□□ -1.07
RTN3-209ENST00000538995 A6NHS1 94 aa8.37□□□□□ -1.07
RTN3-209ENST00000538995 FAM25EA8MYX2 175 aa8.37□□□□□ -1.07
RTN3-209ENST00000538995 C11orf94C9JXX5 98 aa8.37□□□□□ -1.07
RTN3-209ENST00000538995 DEFB4AO15263 64 aa8.37□□□□□ -1.07
RTN3-209ENST00000538995 RBMY1A1P0DJD3 496 aaKnown RBP8.37□□□□□ -1.07
RTN3-209ENST00000538995 RBMY1CP0DJD4 496 aa8.37□□□□□ -1.07
RTN3-209ENST00000538995 PVALBP20472 110 aaPredicted RBP8.37□□□□□ -1.07
RTN3-209ENST00000538995 TCTAP57738 103 aa8.37□□□□□ -1.07
RTN3-209ENST00000538995 RBMY1FQ15415 496 aaKnown RBP8.37□□□□□ -1.07
RTN3-209ENST00000538995 GDF5OSQ5U4N7 250 aa8.37□□□□□ -1.07
RTN3-209ENST00000538995 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.37□□□□□ -1.07
RTN3-209ENST00000538995 C2orf50Q96LR7 162 aa8.37□□□□□ -1.07
RTN3-209ENST00000538995 NEU1Q99519 415 aa8.37□□□□□ -1.07
RTN3-209ENST00000538995 RSG1Q9BU20 258 aa8.37□□□□□ -1.07
RTN3-209ENST00000538995 SCRT1Q9BWW7 348 aa8.37□□□□□ -1.07
RTN3-209ENST00000538995 CLEC5AQ9NY25 188 aa8.37□□□□□ -1.07
RTN3-209ENST00000538995 DOK5Q9P104 306 aa8.37□□□□□ -1.07
RTN3-209ENST00000538995 XCL2Q9UBD3 114 aa8.37□□□□□ -1.07
RTN3-209ENST00000538995 A0A087X0K7 114 aa8.36□□□□□ -1.07
RTN3-209ENST00000538995 A0A0J9YX75 114 aa8.36□□□□□ -1.07
RTN3-209ENST00000538995 A8MTW9 85 aa8.36□□□□□ -1.07
RTN3-209ENST00000538995 UPK1BO75841 260 aa8.36□□□□□ -1.07
RTN3-209ENST00000538995 OR5G3P0C626 314 aa8.36□□□□□ -1.07
RTN3-209ENST00000538995 SLC38A11Q08AI6 406 aa8.36□□□□□ -1.07
RTN3-209ENST00000538995 ARL16Q0P5N6 197 aa8.36□□□□□ -1.07
RTN3-209ENST00000538995 GSG1LQ6UXU4 331 aa8.36□□□□□ -1.07
RTN3-209ENST00000538995 ZNF705AQ6ZN79 300 aaPredicted RBP8.36□□□□□ -1.07
RTN3-209ENST00000538995 ZNF709Q8N972 641 aa8.36□□□□□ -1.07
RTN3-209ENST00000538995 ENKURQ8TC29 256 aa8.36□□□□□ -1.07
RTN3-209ENST00000538995 C17orf77Q96MU5 243 aa8.36□□□□□ -1.07
RTN3-209ENST00000538995 C11orf1Q9H5F2 150 aa8.36□□□□□ -1.07
RTN3-209ENST00000538995 LSM5Q9Y4Y9 91 aaKnown RBP8.36□□□□□ -1.07
RTN3-209ENST00000538995 SMIM9A6NGZ8 99 aa8.35□□□□□ -1.07
RTN3-209ENST00000538995 ZNF705FA8MVS1 300 aaPredicted RBP8.35□□□□□ -1.07
RTN3-209ENST00000538995 GOSR2O14653 212 aa8.35□□□□□ -1.07
RTN3-209ENST00000538995 AGPAT2O15120 278 aa8.35□□□□□ -1.07
RTN3-209ENST00000538995 ZNF705DP0CH99 300 aaPredicted RBP8.35□□□□□ -1.07
RTN3-209ENST00000538995 ZNF705BP0CI00 300 aaPredicted RBP8.35□□□□□ -1.07
RTN3-209ENST00000538995 CAV2P51636 162 aa8.35□□□□□ -1.07
RTN3-209ENST00000538995 PSG9Q00887 426 aa8.35□□□□□ -1.07
RTN3-209ENST00000538995 IL15RAQ13261 267 aa8.35□□□□□ -1.07
RTN3-209ENST00000538995 RAB31Q13636 194 aa8.35□□□□□ -1.07
RTN3-209ENST00000538995 FAM78BQ5VT40 261 aa8.35□□□□□ -1.07
RTN3-209ENST00000538995 C2CD4CQ8TF44 421 aa8.35□□□□□ -1.07
RTN3-209ENST00000538995 C20orf173Q96LM9 149 aa8.35□□□□□ -1.07
RTN3-209ENST00000538995 ARL6Q9H0F7 186 aa8.35□□□□□ -1.07
RTN3-209ENST00000538995 ARV1Q9H2C2 271 aa8.35□□□□□ -1.07
RTN3-209ENST00000538995 GPN1Q9HCN4 374 aaPredicted RBP8.35□□□□□ -1.07
RTN3-209ENST00000538995 LYRM2Q9NU23 88 aaPredicted RBP8.35□□□□□ -1.07
RTN3-209ENST00000538995 ELOA3CA0A087WX78 387 aaPredicted RBP8.34□□□□□ -1.07
RTN3-209ENST00000538995 TMEM189A5PLL7 270 aa8.34□□□□□ -1.07
RTN3-209ENST00000538995 PRAF2O60831 178 aa8.34□□□□□ -1.07
RTN3-209ENST00000538995 LY6G6CO95867 125 aa8.34□□□□□ -1.07
RTN3-209ENST00000538995 IGKV3-20P01619 116 aa8.34□□□□□ -1.07
RTN3-209ENST00000538995 AMBPP02760 352 aa8.34□□□□□ -1.07
RTN3-209ENST00000538995 CXCL2P19875 107 aa8.34□□□□□ -1.07
RTN3-209ENST00000538995 BCAP31P51572 246 aa8.34□□□□□ -1.07
RTN3-209ENST00000538995 DEFB1P60022 68 aa8.34□□□□□ -1.07
RTN3-209ENST00000538995 VWC2Q2TAL6 325 aa8.34□□□□□ -1.07
RTN3-209ENST00000538995 OR4B1Q8NGF8 309 aa8.34□□□□□ -1.07
RTN3-209ENST00000538995 UHRF2Q96PU4 802 aa8.34□□□□□ -1.07
RTN3-209ENST00000538995 MGST2Q99735 147 aa8.34□□□□□ -1.07
RTN3-209ENST00000538995 TRAV8-2A0A0B4J237 113 aa8.33□□□□□ -1.08
RTN3-209ENST00000538995 TRAV10A0A0B4J240 114 aa8.33□□□□□ -1.08
RTN3-209ENST00000538995 TEX48A0A1B0GUV7 120 aa8.33□□□□□ -1.08
RTN3-209ENST00000538995 F6UB75 175 aa8.33□□□□□ -1.08
RTN3-209ENST00000538995 COX7A2P2O60397 106 aa8.33□□□□□ -1.08
RTN3-209ENST00000538995 DUSP14O95147 198 aaKnown RBP8.33□□□□□ -1.08
RTN3-209ENST00000538995 HLA-DMBP28068 263 aa8.33□□□□□ -1.08
RTN3-209ENST00000538995 S100A11P31949 105 aa8.33□□□□□ -1.08
RTN3-209ENST00000538995 CAMLGP49069 296 aa8.33□□□□□ -1.08
RTN3-209ENST00000538995 SULT1A1P50225 295 aa8.33□□□□□ -1.08
RTN3-209ENST00000538995 S100A10P60903 97 aa8.33□□□□□ -1.08
RTN3-209ENST00000538995 HBG1P69891 147 aa8.33□□□□□ -1.08
RTN3-209ENST00000538995 HBG2P69892 147 aa8.33□□□□□ -1.08
RTN3-209ENST00000538995 RAB32Q13637 225 aa8.33□□□□□ -1.08
RTN3-209ENST00000538995 LGALS9CQ6DKI2 356 aa8.33□□□□□ -1.08
RTN3-209ENST00000538995 PATE2Q6UY27 113 aa8.33□□□□□ -1.08
RTN3-209ENST00000538995 STX12Q86Y82 276 aa8.33□□□□□ -1.08
RTN3-209ENST00000538995 SLC35B3Q9H1N7 401 aa8.33□□□□□ -1.08
RTN3-209ENST00000538995 UQCC1Q9NVA1 299 aa8.33□□□□□ -1.08
RTN3-209ENST00000538995 WDR83OSQ9Y284 106 aa8.33□□□□□ -1.08
RTN3-209ENST00000538995 GOLT1BQ9Y3E0 138 aa8.33□□□□□ -1.08
RTN3-209ENST00000538995 FAM24AA6NFZ4 105 aa8.32□□□□□ -1.08
RTN3-209ENST00000538995 LCE2BO14633 110 aa8.32□□□□□ -1.08
RTN3-209ENST00000538995 MRPS12O15235 138 aaKnown RBP8.32□□□□□ -1.08
RTN3-209ENST00000538995 CST7O76096 145 aa8.32□□□□□ -1.08
RTN3-209ENST00000538995 FGL1Q08830 312 aa8.32□□□□□ -1.08
RTN3-209ENST00000538995 LCN15Q6UWW0 184 aa8.32□□□□□ -1.08
RTN3-209ENST00000538995 AMTNQ6UX39 209 aa8.32□□□□□ -1.08
RTN3-209ENST00000538995 Q6ZTC4 211 aa8.32□□□□□ -1.08
RTN3-209ENST00000538995 LINC00305Q7Z4B0 112 aa8.32□□□□□ -1.08
RTN3-209ENST00000538995 TMEM252Q8N6L7 170 aa8.32□□□□□ -1.08
RTN3-209ENST00000538995 CHAC2Q8WUX2 184 aa8.32□□□□□ -1.08
RTN3-209ENST00000538995 RFNGQ9Y644 331 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms