RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 OTORQ9NRC9 128 aa14.86□□□□□ -0.03
SFSWAP-207ENST00000538548 hADV38S2A0JD32 116 aa14.85□□□□□ -0.03
SFSWAP-207ENST00000538548 PLP1P60201 277 aa14.85□□□□□ -0.03
SFSWAP-207ENST00000538548 ZADH2Q8N4Q0 377 aa14.85□□□□□ -0.03
SFSWAP-207ENST00000538548 OR10X1Q8NGY0 326 aa14.85□□□□□ -0.03
SFSWAP-207ENST00000538548 IGLV2-11P01706 119 aa14.85□□□□□ -0.03
SFSWAP-207ENST00000538548 CRYGCP07315 174 aa14.85□□□□□ -0.03
SFSWAP-207ENST00000538548 PRNTQ86SH4 94 aa14.85□□□□□ -0.03
SFSWAP-207ENST00000538548 OR4C13Q8NGP0 309 aa14.85□□□□□ -0.03
SFSWAP-207ENST00000538548 RAB37Q96AX2 223 aa14.85□□□□□ -0.03
SFSWAP-207ENST00000538548 SPRY3O43610 288 aa14.84□□□□□ -0.03
SFSWAP-207ENST00000538548 IFI27P40305 119 aaPredicted RBP14.84□□□□□ -0.03
SFSWAP-207ENST00000538548 SAMD13Q5VXD3 122 aa14.84□□□□□ -0.03
SFSWAP-207ENST00000538548 TMEM116Q8NCL8 245 aa14.84□□□□□ -0.03
SFSWAP-207ENST00000538548 SRSF12Q8WXF0 261 aaKnown RBP14.84□□□□□ -0.03
SFSWAP-207ENST00000538548 RNF7Q9UBF6 113 aa14.84□□□□□ -0.03
SFSWAP-207ENST00000538548 FAM106CPP0CH98 169 aa14.83□□□□□ -0.03
SFSWAP-207ENST00000538548 FABP2P12104 132 aa14.83□□□□□ -0.03
SFSWAP-207ENST00000538548 HOXB4P17483 251 aaPredicted RBP14.83□□□□□ -0.03
SFSWAP-207ENST00000538548 GATA4P43694 442 aa14.83□□□□□ -0.03
SFSWAP-207ENST00000538548 FAM106AQ4KMX7 169 aa14.83□□□□□ -0.03
SFSWAP-207ENST00000538548 TMEM178AQ8NBL3 297 aa14.83□□□□□ -0.03
SFSWAP-207ENST00000538548 C8orf46Q8TAG6 207 aa14.83□□□□□ -0.03
SFSWAP-207ENST00000538548 DKK4Q9UBT3 224 aa14.83□□□□□ -0.03
SFSWAP-207ENST00000538548 TRBV6-1A0A0K0K1D8 114 aa14.83□□□□□ -0.04
SFSWAP-207ENST00000538548 RUSC1-AS1Q66K80 236 aa14.83□□□□□ -0.04
SFSWAP-207ENST00000538548 FAM216BQ8N7L0 139 aa14.83□□□□□ -0.04
SFSWAP-207ENST00000538548 CCL13Q99616 98 aa14.83□□□□□ -0.04
SFSWAP-207ENST00000538548 ARFGEF3Q5TH69 2177 aa14.83□□□□□ -0.04
SFSWAP-207ENST00000538548 CACNG7P62955 275 aa14.82□□□□□ -0.04
SFSWAP-207ENST00000538548 LOXL1Q08397 574 aaPredicted RBP14.82□□□□□ -0.04
SFSWAP-207ENST00000538548 C1orf185Q5T7R7 199 aa14.82□□□□□ -0.04
SFSWAP-207ENST00000538548 GOLT1AQ6ZVE7 132 aa14.82□□□□□ -0.04
SFSWAP-207ENST00000538548 DEFB108BQ8NET1 73 aa14.82□□□□□ -0.04
SFSWAP-207ENST00000538548 ABHD17AQ96GS6 310 aa14.82□□□□□ -0.04
SFSWAP-207ENST00000538548 FER1L6-AS2Q96M78 137 aa14.82□□□□□ -0.04
SFSWAP-207ENST00000538548 A0A1W2PPI3 338 aa14.82□□□□□ -0.04
SFSWAP-207ENST00000538548 ZNF785A8K8V0 405 aa14.82□□□□□ -0.04
SFSWAP-207ENST00000538548 Q6AWC8 147 aa14.82□□□□□ -0.04
SFSWAP-207ENST00000538548 ZNF788Q6ZQV5 615 aa14.82□□□□□ -0.04
SFSWAP-207ENST00000538548 FAM169BQ8N8A8 192 aa14.82□□□□□ -0.04
SFSWAP-207ENST00000538548 INSIG2Q9Y5U4 225 aa14.82□□□□□ -0.04
SFSWAP-207ENST00000538548 C9orf106Q8NAJ2 232 aa14.81□□□□□ -0.04
SFSWAP-207ENST00000538548 TNFRSF14Q92956 283 aa14.81□□□□□ -0.04
SFSWAP-207ENST00000538548 SIGLEC8Q9NYZ4 499 aa14.81□□□□□ -0.04
SFSWAP-207ENST00000538548 LINC00312Q9Y6C7 94 aa14.81□□□□□ -0.04
SFSWAP-207ENST00000538548 CADP27708 2225 aa14.81□□□□□ -0.04
SFSWAP-207ENST00000538548 ZNF493Q6ZR52 646 aa14.81□□□□□ -0.04
SFSWAP-207ENST00000538548 Q71RC1 249 aaPredicted RBP14.81□□□□□ -0.04
SFSWAP-207ENST00000538548 RAI1Q7Z5J4 1906 aaPredicted RBP14.8□□□□□ -0.04
SFSWAP-207ENST00000538548 SPAARA0A1B0GVQ0 90 aa14.8□□□□□ -0.04
SFSWAP-207ENST00000538548 IGLV2-23P01705 113 aa14.8□□□□□ -0.04
SFSWAP-207ENST00000538548 PPIAL4GP0DN37 164 aa14.8□□□□□ -0.04
SFSWAP-207ENST00000538548 SCGB1A1P11684 91 aa14.8□□□□□ -0.04
SFSWAP-207ENST00000538548 ATP1A1-AS1Q5TC04 95 aa14.8□□□□□ -0.04
SFSWAP-207ENST00000538548 PVRIGQ6DKI7 326 aa14.8□□□□□ -0.04
SFSWAP-207ENST00000538548 RP1L1Q8IWN7 2480 aaPredicted RBP14.8□□□□□ -0.04
SFSWAP-207ENST00000538548 IGHG3P01860 377 aa14.79□□□□□ -0.04
SFSWAP-207ENST00000538548 TIMM23BQ5SRD1 257 aa14.79□□□□□ -0.04
SFSWAP-207ENST00000538548 SAMD5Q5TGI4 173 aa14.79□□□□□ -0.04
SFSWAP-207ENST00000538548 TMEM164Q5U3C3 297 aa14.79□□□□□ -0.04
SFSWAP-207ENST00000538548 DEFB124Q8NES8 71 aa14.79□□□□□ -0.04
SFSWAP-207ENST00000538548 ZNF414Q96IQ9 312 aa14.79□□□□□ -0.04
SFSWAP-207ENST00000538548 PLSCR4Q9NRQ2 329 aa14.79□□□□□ -0.04
SFSWAP-207ENST00000538548 TMEM14CQ9P0S9 112 aa14.79□□□□□ -0.04
SFSWAP-207ENST00000538548 HIGD1AQ9Y241 93 aa14.79□□□□□ -0.04
SFSWAP-207ENST00000538548 SLC25A15Q9Y619 301 aa14.79□□□□□ -0.04
SFSWAP-207ENST00000538548 PIEZO2Q9H5I5 2752 aa14.79□□□□□ -0.04
SFSWAP-207ENST00000538548 NDUFS8O00217 210 aa14.79□□□□□ -0.04
SFSWAP-207ENST00000538548 TCTAP57738 103 aa14.79□□□□□ -0.04
SFSWAP-207ENST00000538548 PCP2Q8IVA1 136 aa14.79□□□□□ -0.04
SFSWAP-207ENST00000538548 EXOC3-AS1Q8N2X6 119 aa14.79□□□□□ -0.04
SFSWAP-207ENST00000538548 TMEM190Q8WZ59 177 aa14.79□□□□□ -0.04
SFSWAP-207ENST00000538548 ZNF71Q9NQZ8 489 aaPredicted RBP14.79□□□□□ -0.04
SFSWAP-207ENST00000538548 LOC389332A0A1B0GUA5 103 aa14.79□□□□□ -0.04
SFSWAP-207ENST00000538548 TMEM189A5PLL7 270 aa14.79□□□□□ -0.04
SFSWAP-207ENST00000538548 D6R8Y8 96 aa14.79□□□□□ -0.04
SFSWAP-207ENST00000538548 HBDP02042 147 aa14.79□□□□□ -0.04
SFSWAP-207ENST00000538548 HCP5Q6MZN7 132 aa14.79□□□□□ -0.04
SFSWAP-207ENST00000538548 U3KQK5 164 aa14.79□□□□□ -0.04
SFSWAP-207ENST00000538548 SVILO95425 2214 aa14.78□□□□□ -0.04
SFSWAP-207ENST00000538548 INTS1Q8N201 2190 aaKnown RBP14.78□□□□□ -0.04
SFSWAP-207ENST00000538548 GNG7O60262 68 aa14.78□□□□□ -0.04
SFSWAP-207ENST00000538548 ZNF883P0CG24 379 aa14.78□□□□□ -0.04
SFSWAP-207ENST00000538548 SMIM13P0DJ93 91 aa14.78□□□□□ -0.04
SFSWAP-207ENST00000538548 NMUP48645 174 aa14.78□□□□□ -0.04
SFSWAP-207ENST00000538548 RPL24P83731 157 aaKnown RBP14.78□□□□□ -0.04
SFSWAP-207ENST00000538548 TMEM75Q8N9X5 138 aa14.78□□□□□ -0.04
SFSWAP-207ENST00000538548 GLRXP35754 106 aa14.78□□□□□ -0.04
SFSWAP-207ENST00000538548 MEF2CQ06413 473 aaPredicted RBP14.78□□□□□ -0.04
SFSWAP-207ENST00000538548 PLXNB1O43157 2135 aa14.77□□□□□ -0.04
SFSWAP-207ENST00000538548 TEX48A0A1B0GUV7 120 aa14.77□□□□□ -0.04
SFSWAP-207ENST00000538548 CT45A10P0DMU9 189 aa14.77□□□□□ -0.04
SFSWAP-207ENST00000538548 VMA21Q3ZAQ7 101 aa14.77□□□□□ -0.04
SFSWAP-207ENST00000538548 PRELID3AQ96N28 172 aa14.77□□□□□ -0.04
SFSWAP-207ENST00000538548 TPPP3Q9BW30 176 aa14.77□□□□□ -0.04
SFSWAP-207ENST00000538548 IGLV3-9A0A075B6K5 115 aa14.77□□□□□ -0.05
SFSWAP-207ENST00000538548 SLC25A17O43808 307 aa14.77□□□□□ -0.05
SFSWAP-207ENST00000538548 TNFRSF1AP19438 455 aa14.77□□□□□ -0.05
SFSWAP-207ENST00000538548 PRSS57Q6UWY2 283 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms