RNA–Protein interactions for RNA: ENST00000537033.1

SYNE1-235, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 4

Gene SYNE1, Length 647 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-235ENST00000537033 IL5P05113 134 aa9.93□□□□□ -0.82
SYNE1-235ENST00000537033 RPL7P18124 248 aaKnown RBP9.93□□□□□ -0.82
SYNE1-235ENST00000537033 DAD1P61803 113 aa9.93□□□□□ -0.82
SYNE1-235ENST00000537033 FGL1Q08830 312 aa9.93□□□□□ -0.82
SYNE1-235ENST00000537033 OXA1LQ15070 435 aa9.93□□□□□ -0.82
SYNE1-235ENST00000537033 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.93□□□□□ -0.82
SYNE1-235ENST00000537033 CYP2G1PQ6ZSU1 146 aa9.93□□□□□ -0.82
SYNE1-235ENST00000537033 TMEM144Q7Z5S9 345 aa9.93□□□□□ -0.82
SYNE1-235ENST00000537033 C1orf158Q8N1D5 194 aa9.93□□□□□ -0.82
SYNE1-235ENST00000537033 PSENENQ9NZ42 101 aa9.93□□□□□ -0.82
SYNE1-235ENST00000537033 HIGD1AQ9Y241 93 aa9.93□□□□□ -0.82
SYNE1-235ENST00000537033 H3BRN7 92 aa9.92□□□□□ -0.82
SYNE1-235ENST00000537033 M0R2N4 97 aa9.92□□□□□ -0.82
SYNE1-235ENST00000537033 HYPMO75409 117 aa9.92□□□□□ -0.82
SYNE1-235ENST00000537033 ADAP1O75689 374 aa9.92□□□□□ -0.82
SYNE1-235ENST00000537033 CNN1P51911 297 aaKnown RBP9.92□□□□□ -0.82
SYNE1-235ENST00000537033 POLR2GP62487 172 aaKnown RBP eCLIP9.92□□□□□ -0.82
SYNE1-235ENST00000537033 TMEM182Q6ZP80 229 aaPredicted RBP9.92□□□□□ -0.82
SYNE1-235ENST00000537033 ZNF738Q8NE65 137 aa9.92□□□□□ -0.82
SYNE1-235ENST00000537033 SHANK2-AS3Q9BTD1 123 aa9.92□□□□□ -0.82
SYNE1-235ENST00000537033 SLC25A39Q9BZJ4 359 aaPredicted RBP9.92□□□□□ -0.82
SYNE1-235ENST00000537033 RNF24Q9Y225 148 aa9.92□□□□□ -0.82
SYNE1-235ENST00000537033 VPS13DQ5THJ4 4388 aa9.92□□□□□ -0.82
SYNE1-235ENST00000537033 A8MTW9 85 aa9.91□□□□□ -0.82
SYNE1-235ENST00000537033 NDUFB6O95139 128 aa9.91□□□□□ -0.82
SYNE1-235ENST00000537033 OR5G3P0C626 314 aa9.91□□□□□ -0.82
SYNE1-235ENST00000537033 LINC00869P0C866 280 aa9.91□□□□□ -0.82
SYNE1-235ENST00000537033 B2MP61769 119 aa9.91□□□□□ -0.82
SYNE1-235ENST00000537033 SELENOTP62341 195 aa9.91□□□□□ -0.82
SYNE1-235ENST00000537033 ID3Q02535 119 aa9.91□□□□□ -0.82
SYNE1-235ENST00000537033 SPINK13Q1W4C9 94 aa9.91□□□□□ -0.82
SYNE1-235ENST00000537033 AMTNQ6UX39 209 aa9.91□□□□□ -0.82
SYNE1-235ENST00000537033 OR11H7Q8NGC8 314 aa9.91□□□□□ -0.82
SYNE1-235ENST00000537033 SRRQ9GZT4 340 aa9.91□□□□□ -0.82
SYNE1-235ENST00000537033 MGAT4CQ9UBM8 478 aa9.91□□□□□ -0.82
SYNE1-235ENST00000537033 DNAH10Q8IVF4 4471 aa9.9□□□□□ -0.82
SYNE1-235ENST00000537033 PRSS29PA6NIE9 313 aa9.9□□□□□ -0.82
SYNE1-235ENST00000537033 CENPXA8MT69 81 aa9.9□□□□□ -0.82
SYNE1-235ENST00000537033 M0R2Z0 102 aa9.9□□□□□ -0.82
SYNE1-235ENST00000537033 SCGB1D2O95969 90 aa9.9□□□□□ -0.82
SYNE1-235ENST00000537033 RRAS2P62070 204 aaPredicted RBP9.9□□□□□ -0.82
SYNE1-235ENST00000537033 LGALS9BQ3B8N2 356 aa9.9□□□□□ -0.82
SYNE1-235ENST00000537033 C4orf46Q504U0 113 aa9.9□□□□□ -0.82
SYNE1-235ENST00000537033 RNF182Q8N6D2 247 aa9.9□□□□□ -0.82
SYNE1-235ENST00000537033 LRRC20Q8TCA0 184 aa9.9□□□□□ -0.82
SYNE1-235ENST00000537033 SMIM8Q96KF7 97 aa9.9□□□□□ -0.82
SYNE1-235ENST00000537033 PPP1R14DQ9NXH3 145 aa9.9□□□□□ -0.82
SYNE1-235ENST00000537033 PLA2G2EQ9NZK7 142 aa9.9□□□□□ -0.82
SYNE1-235ENST00000537033 NDUFA13Q9P0J0 144 aa9.9□□□□□ -0.82
SYNE1-235ENST00000537033 HECTD4Q9Y4D8 3996 aa9.9□□□□□ -0.83
SYNE1-235ENST00000537033 DNAH6Q9C0G6 4158 aa9.89□□□□□ -0.83
SYNE1-235ENST00000537033 TRAV8-2A0A0B4J237 113 aa9.89□□□□□ -0.83
SYNE1-235ENST00000537033 BOLA2-SMG1P6H3BVE0 249 aa9.89□□□□□ -0.83
SYNE1-235ENST00000537033 ZNF701M0R085 212 aaPredicted RBP9.89□□□□□ -0.83
SYNE1-235ENST00000537033 OR4E1P0C645 316 aa9.89□□□□□ -0.83
SYNE1-235ENST00000537033 DLK1P80370 383 aa9.89□□□□□ -0.83
SYNE1-235ENST00000537033 HIST1H1AQ02539 215 aaPredicted RBP9.89□□□□□ -0.83
SYNE1-235ENST00000537033 RNF212Q495C1 297 aa9.89□□□□□ -0.83
SYNE1-235ENST00000537033 SOHLH1Q5JUK2 328 aa9.89□□□□□ -0.83
SYNE1-235ENST00000537033 IGFL4Q6B9Z1 124 aa9.89□□□□□ -0.83
SYNE1-235ENST00000537033 TMEM88Q6PEY1 159 aa9.89□□□□□ -0.83
SYNE1-235ENST00000537033 OR10P1Q8NGE3 313 aa9.89□□□□□ -0.83
SYNE1-235ENST00000537033 C17orf77Q96MU5 243 aa9.89□□□□□ -0.83
SYNE1-235ENST00000537033 NPVFQ9HCQ7 196 aa9.89□□□□□ -0.83
SYNE1-235ENST00000537033 FLVCR2Q9UPI3 526 aa9.89□□□□□ -0.83
SYNE1-235ENST00000537033 IGLV2-18A0A075B6J9 118 aa9.88□□□□□ -0.83
SYNE1-235ENST00000537033 LINC00854A0A1B0GVQ3 168 aa9.88□□□□□ -0.83
SYNE1-235ENST00000537033 LYRM9A8MSI8 78 aa9.88□□□□□ -0.83
SYNE1-235ENST00000537033 ZNF705GA8MUZ8 300 aaPredicted RBP9.88□□□□□ -0.83
SYNE1-235ENST00000537033 FNDC10F2Z333 226 aa9.88□□□□□ -0.83
SYNE1-235ENST00000537033 METTL15P1P0C7V9 234 aa9.88□□□□□ -0.83
SYNE1-235ENST00000537033 PLP1P60201 277 aa9.88□□□□□ -0.83
SYNE1-235ENST00000537033 RHOBP62745 196 aa9.88□□□□□ -0.83
SYNE1-235ENST00000537033 TEPPQ6URK8 271 aa9.88□□□□□ -0.83
SYNE1-235ENST00000537033 BAP18Q8IXM2 172 aa9.88□□□□□ -0.83
SYNE1-235ENST00000537033 C15orf53Q8NAA6 179 aa9.88□□□□□ -0.83
SYNE1-235ENST00000537033 UHRF2Q96PU4 802 aa9.88□□□□□ -0.83
SYNE1-235ENST00000537033 ARL6Q9H0F7 186 aa9.88□□□□□ -0.83
SYNE1-235ENST00000537033 A0A087X0K7 114 aa9.87□□□□□ -0.83
SYNE1-235ENST00000537033 PMS2P5A8MQ11 134 aa9.87□□□□□ -0.83
SYNE1-235ENST00000537033 TSC22D2O75157 780 aa9.87□□□□□ -0.83
SYNE1-235ENST00000537033 ANXA7P20073 488 aaKnown RBP9.87□□□□□ -0.83
SYNE1-235ENST00000537033 TSPOP30536 169 aa9.87□□□□□ -0.83
SYNE1-235ENST00000537033 BAK1Q16611 211 aa9.87□□□□□ -0.83
SYNE1-235ENST00000537033 IAH1Q2TAA2 248 aaPredicted RBP9.87□□□□□ -0.83
SYNE1-235ENST00000537033 PXDC1Q5TGL8 231 aa9.87□□□□□ -0.83
SYNE1-235ENST00000537033 TMEM14EPQ6UXP3 125 aa9.87□□□□□ -0.83
SYNE1-235ENST00000537033 ZNF546Q86UE3 836 aa9.87□□□□□ -0.83
SYNE1-235ENST00000537033 TMEM256Q8N2U0 113 aa9.87□□□□□ -0.83
SYNE1-235ENST00000537033 OR8A1Q8NGG7 326 aa9.87□□□□□ -0.83
SYNE1-235ENST00000537033 RBM38Q9H0Z9 239 aaKnown RBP9.87□□□□□ -0.83
SYNE1-235ENST00000537033 GSKIPQ9P0R6 139 aa9.87□□□□□ -0.83
SYNE1-235ENST00000537033 TRAV12-2A0A075B6T6 113 aa9.86□□□□□ -0.83
SYNE1-235ENST00000537033 A0A1B0GVY2 172 aa9.86□□□□□ -0.83
SYNE1-235ENST00000537033 K7EPK0 472 aa9.86□□□□□ -0.83
SYNE1-235ENST00000537033 GOSR2O14653 212 aa9.86□□□□□ -0.83
SYNE1-235ENST00000537033 RTL8CO15255 209 aa9.86□□□□□ -0.83
SYNE1-235ENST00000537033 CRXO43186 299 aaPredicted RBP9.86□□□□□ -0.83
SYNE1-235ENST00000537033 CCNKO75909 580 aa9.86□□□□□ -0.83
SYNE1-235ENST00000537033 DEFB130BP0DP73 79 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms