RNA–Protein interactions for RNA: ENST00000536548.5

CPSF7-216, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-216ENST00000536548 THAP8Q8NA92 274 aa6.26□□□□□ -1.41
CPSF7-216ENST00000536548 C5orf17Q8NAS9 161 aa6.26□□□□□ -1.41
CPSF7-216ENST00000536548 OR2Z1Q8NG97 314 aa6.26□□□□□ -1.41
CPSF7-216ENST00000536548 OR1N2Q8NGR9 330 aa6.26□□□□□ -1.41
CPSF7-216ENST00000536548 OR10X1Q8NGY0 326 aa6.26□□□□□ -1.41
CPSF7-216ENST00000536548 H1FXQ92522 213 aaKnown RBP6.26□□□□□ -1.41
CPSF7-216ENST00000536548 FXYD5Q96DB9 178 aa6.26□□□□□ -1.41
CPSF7-216ENST00000536548 PLPPR2Q96GM1 343 aa6.26□□□□□ -1.41
CPSF7-216ENST00000536548 SSBP4Q9BWG4 385 aaPredicted RBP6.26□□□□□ -1.41
CPSF7-216ENST00000536548 PRSS22Q9GZN4 317 aa6.26□□□□□ -1.41
CPSF7-216ENST00000536548 CSTL1Q9H114 145 aa6.26□□□□□ -1.41
CPSF7-216ENST00000536548 DEFB127Q9H1M4 99 aa6.26□□□□□ -1.41
CPSF7-216ENST00000536548 IGKV1OR2-108A0A075B7D4 117 aa6.25□□□□□ -1.41
CPSF7-216ENST00000536548 TRAV5A0A0B4J249 113 aa6.25□□□□□ -1.41
CPSF7-216ENST00000536548 TRBV6-1A0A0K0K1D8 114 aa6.25□□□□□ -1.41
CPSF7-216ENST00000536548 hDV102S1A0JD36 115 aa6.25□□□□□ -1.41
CPSF7-216ENST00000536548 GAGE12BA1L429 117 aa6.25□□□□□ -1.41
CPSF7-216ENST00000536548 GAGE10A6NGK3 116 aa6.25□□□□□ -1.41
CPSF7-216ENST00000536548 OR2T8A6NH00 312 aa6.25□□□□□ -1.41
CPSF7-216ENST00000536548 H3BRM9 83 aa6.25□□□□□ -1.41
CPSF7-216ENST00000536548 M0QZ24 198 aa6.25□□□□□ -1.41
CPSF7-216ENST00000536548 IGLV1-44P01699 117 aa6.25□□□□□ -1.41
CPSF7-216ENST00000536548 CECR9P0C854 216 aa6.25□□□□□ -1.41
CPSF7-216ENST00000536548 IGLC1P0CG04 106 aa6.25□□□□□ -1.41
CPSF7-216ENST00000536548 GATA2P23769 480 aaPredicted RBP6.25□□□□□ -1.41
CPSF7-216ENST00000536548 HTR1DP28221 377 aa6.25□□□□□ -1.41
CPSF7-216ENST00000536548 CEACAM3P40198 252 aa6.25□□□□□ -1.41
CPSF7-216ENST00000536548 FABP6P51161 128 aa6.25□□□□□ -1.41
CPSF7-216ENST00000536548 RIGQ13278 110 aa6.25□□□□□ -1.41
CPSF7-216ENST00000536548 LINC01545Q5VT33 79 aa6.25□□□□□ -1.41
CPSF7-216ENST00000536548 TCF24Q7RTU0 167 aa6.25□□□□□ -1.41
CPSF7-216ENST00000536548 TMEM167AQ8TBQ9 72 aa6.25□□□□□ -1.41
CPSF7-216ENST00000536548 ST6GALNAC6Q969X2 333 aa6.25□□□□□ -1.41
CPSF7-216ENST00000536548 URB1-AS1Q96HZ7 61 aa6.25□□□□□ -1.41
CPSF7-216ENST00000536548 LINC00574Q9H8X3 128 aa6.25□□□□□ -1.41
CPSF7-216ENST00000536548 NDUFA4L2Q9NRX3 87 aa6.25□□□□□ -1.41
CPSF7-216ENST00000536548 SPRR3Q9UBC9 169 aa6.25□□□□□ -1.41
CPSF7-216ENST00000536548 RNF24Q9Y225 148 aa6.25□□□□□ -1.41
CPSF7-216ENST00000536548 KMT2CQ8NEZ4 4911 aaKnown RBP6.25□□□□□ -1.41
CPSF7-216ENST00000536548 TENM1Q9UKZ4 2725 aa6.25□□□□□ -1.41
CPSF7-216ENST00000536548 KIAA2026Q5HYC2 2103 aa6.25□□□□□ -1.41
CPSF7-216ENST00000536548 RYR3Q15413 4870 aa6.25□□□□□ -1.41
CPSF7-216ENST00000536548 PRKDCP78527 4128 aaKnown RBP6.24□□□□□ -1.41
CPSF7-216ENST00000536548 C19orf71A6NCJ1 209 aa6.24□□□□□ -1.41
CPSF7-216ENST00000536548 PGPA6NDG6 321 aa6.24□□□□□ -1.41
CPSF7-216ENST00000536548 C22orf46C9J442 243 aa6.24□□□□□ -1.41
CPSF7-216ENST00000536548 LTAP01374 205 aa6.24□□□□□ -1.41
CPSF7-216ENST00000536548 SAA1P0DJI8 122 aaPredicted RBP6.24□□□□□ -1.41
CPSF7-216ENST00000536548 PYYP10082 97 aa6.24□□□□□ -1.41
CPSF7-216ENST00000536548 MYOD1P15172 320 aa6.24□□□□□ -1.41
CPSF7-216ENST00000536548 SRSF2Q01130 221 aaKnown RBP6.24□□□□□ -1.41
CPSF7-216ENST00000536548 HSD52Q0P140 79 aa6.24□□□□□ -1.41
CPSF7-216ENST00000536548 TMEM177Q53S58 311 aa6.24□□□□□ -1.41
CPSF7-216ENST00000536548 TMEM97Q5BJF2 176 aa6.24□□□□□ -1.41
CPSF7-216ENST00000536548 Q6AWC8 147 aa6.24□□□□□ -1.41
CPSF7-216ENST00000536548 SLC25A48Q6ZT89 311 aaKnown RBP6.24□□□□□ -1.41
CPSF7-216ENST00000536548 FA2HQ7L5A8 372 aa6.24□□□□□ -1.41
CPSF7-216ENST00000536548 KIR3DL3Q8N743 410 aa6.24□□□□□ -1.41
CPSF7-216ENST00000536548 GATD1Q8NB37 220 aa6.24□□□□□ -1.41
CPSF7-216ENST00000536548 OR5A1Q8NGJ0 315 aa6.24□□□□□ -1.41
CPSF7-216ENST00000536548 OR9G4Q8NGQ1 327 aa6.24□□□□□ -1.41
CPSF7-216ENST00000536548 OR10AG1Q8NH19 301 aa6.24□□□□□ -1.41
CPSF7-216ENST00000536548 FAM222BQ8WU58 562 aa6.24□□□□□ -1.41
CPSF7-216ENST00000536548 RND1Q92730 232 aa6.24□□□□□ -1.41
CPSF7-216ENST00000536548 PGLYRP4Q96LB8 373 aa6.24□□□□□ -1.41
CPSF7-216ENST00000536548 LINC00479Q96M42 142 aa6.24□□□□□ -1.41
CPSF7-216ENST00000536548 HARBI1Q96MB7 349 aa6.24□□□□□ -1.41
CPSF7-216ENST00000536548 MLST8Q9BVC4 326 aa6.24□□□□□ -1.41
CPSF7-216ENST00000536548 NCKAP5O14513 1909 aa6.24□□□□□ -1.41
CPSF7-216ENST00000536548 IGHV3OR15-7A0A075B7D8 119 aa6.23□□□□□ -1.41
CPSF7-216ENST00000536548 hADV38S2A0JD32 116 aa6.23□□□□□ -1.41
CPSF7-216ENST00000536548 C7orf71A4D174 169 aa6.23□□□□□ -1.41
CPSF7-216ENST00000536548 C9orf118A6NHY6 69 aa6.23□□□□□ -1.41
CPSF7-216ENST00000536548 SRRM4A7MD48 611 aaKnown RBP6.23□□□□□ -1.41
CPSF7-216ENST00000536548 NPIPB6E9PJ23 425 aa6.23□□□□□ -1.41
CPSF7-216ENST00000536548 CORTO00230 105 aa6.23□□□□□ -1.41
CPSF7-216ENST00000536548 SIVA1O15304 175 aa6.23□□□□□ -1.41
CPSF7-216ENST00000536548 MOSP00540 346 aa6.23□□□□□ -1.41
CPSF7-216ENST00000536548 LHBP01229 141 aa6.23□□□□□ -1.41
CPSF7-216ENST00000536548 CT45A6P0DMU7 189 aa6.23□□□□□ -1.41
CPSF7-216ENST00000536548 CT45A5P0DMU8 189 aa6.23□□□□□ -1.41
CPSF7-216ENST00000536548 CT45A7P0DMV0 189 aa6.23□□□□□ -1.41
CPSF7-216ENST00000536548 FOXA3P55318 350 aaPredicted RBP6.23□□□□□ -1.41
CPSF7-216ENST00000536548 PAX2Q02962 417 aa6.23□□□□□ -1.41
CPSF7-216ENST00000536548 KRTAP1-1Q07627 177 aa6.23□□□□□ -1.41
CPSF7-216ENST00000536548 GUSBP1Q15486 140 aa6.23□□□□□ -1.41
CPSF7-216ENST00000536548 ZNF833PQ6ZTB9 187 aa6.23□□□□□ -1.41
CPSF7-216ENST00000536548 LINC00305Q7Z4B0 112 aa6.23□□□□□ -1.41
CPSF7-216ENST00000536548 MOB3BQ86TA1 216 aa6.23□□□□□ -1.41
CPSF7-216ENST00000536548 MOGAT3Q86VF5 341 aa6.23□□□□□ -1.41
CPSF7-216ENST00000536548 ZCCHC24Q8N2G6 241 aaKnown RBP6.23□□□□□ -1.41
CPSF7-216ENST00000536548 ZNRF1Q8ND25 227 aa6.23□□□□□ -1.41
CPSF7-216ENST00000536548 OR4X2Q8NGF9 303 aa6.23□□□□□ -1.41
CPSF7-216ENST00000536548 OR5AN1Q8NGI8 311 aa6.23□□□□□ -1.41
CPSF7-216ENST00000536548 TRGV9Q99603 122 aa6.23□□□□□ -1.41
CPSF7-216ENST00000536548 OTORQ9NRC9 128 aa6.23□□□□□ -1.41
CPSF7-216ENST00000536548 RNF7Q9UBF6 113 aa6.23□□□□□ -1.41
CPSF7-216ENST00000536548 RPUSD1Q9UJJ7 312 aaKnown RBP6.23□□□□□ -1.41
CPSF7-216ENST00000536548 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.23□□□□□ -1.411e-7■■■□□ 17.2
CPSF7-216ENST00000536548 DNAJC13O75165 2243 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms