RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 TRAV3A0A0B4J244 114 aa11.25□□□□□ -0.61
LIG1-203ENST00000536218 K7EMI3 77 aa11.25□□□□□ -0.61
LIG1-203ENST00000536218 TAS2R45P59539 299 aa11.25□□□□□ -0.61
LIG1-203ENST00000536218 ZNF503Q96F45 646 aa11.25□□□□□ -0.61
LIG1-203ENST00000536218 VGLL1Q99990 258 aa11.25□□□□□ -0.61
LIG1-203ENST00000536218 SPANXB1Q9NS25 103 aaPredicted RBP11.25□□□□□ -0.61
LIG1-203ENST00000536218 AMMECR1Q9Y4X0 333 aaPredicted RBP11.25□□□□□ -0.61
LIG1-203ENST00000536218 TMEM189A5PLL7 270 aa11.24□□□□□ -0.61
LIG1-203ENST00000536218 A8MWL6 223 aa11.24□□□□□ -0.61
LIG1-203ENST00000536218 CFHR2P36980 270 aa11.24□□□□□ -0.61
LIG1-203ENST00000536218 INSL3P51460 131 aa11.24□□□□□ -0.61
LIG1-203ENST00000536218 UBE2L3P68036 154 aaKnown RBP11.24□□□□□ -0.61
LIG1-203ENST00000536218 ADIPOQQ15848 244 aa11.24□□□□□ -0.61
LIG1-203ENST00000536218 MOB3BQ86TA1 216 aa11.24□□□□□ -0.61
LIG1-203ENST00000536218 PCP2Q8IVA1 136 aa11.24□□□□□ -0.61
LIG1-203ENST00000536218 CCL17Q92583 94 aa11.24□□□□□ -0.61
LIG1-203ENST00000536218 DYSFO75923 2080 aa11.24□□□□□ -0.61
LIG1-203ENST00000536218 TRAV5A0A0B4J249 113 aa11.24□□□□□ -0.61
LIG1-203ENST00000536218 SMAD7O15105 426 aaKnown RBP11.24□□□□□ -0.61
LIG1-203ENST00000536218 RND1Q92730 232 aa11.24□□□□□ -0.61
LIG1-203ENST00000536218 SPATA25Q9BR10 227 aa11.24□□□□□ -0.61
LIG1-203ENST00000536218 EIF4EBP1Q13541 118 aaPredicted RBP11.23□□□□□ -0.61
LIG1-203ENST00000536218 MRPL16Q9NX20 251 aaKnown RBP11.23□□□□□ -0.61
LIG1-203ENST00000536218 ZNRD1Q9P1U0 126 aa11.23□□□□□ -0.61
LIG1-203ENST00000536218 SPTBN1Q01082 2364 aaKnown RBP11.23□□□□□ -0.61
LIG1-203ENST00000536218 APOHP02749 345 aaPredicted RBP11.23□□□□□ -0.61
LIG1-203ENST00000536218 DUTP33316 252 aaKnown RBP11.23□□□□□ -0.61
LIG1-203ENST00000536218 C1orf229Q6ZS94 237 aaPredicted RBP11.23□□□□□ -0.61
LIG1-203ENST00000536218 H3BMG7 143 aa11.22□□□□□ -0.61
LIG1-203ENST00000536218 LOXL3P58215 753 aa11.22□□□□□ -0.61
LIG1-203ENST00000536218 TMEM95Q3KNT9 176 aa11.22□□□□□ -0.61
LIG1-203ENST00000536218 GNG5P63218 68 aa11.22□□□□□ -0.61
LIG1-203ENST00000536218 C3orf36Q3SXR2 165 aa11.22□□□□□ -0.61
LIG1-203ENST00000536218 AMTNQ6UX39 209 aa11.22□□□□□ -0.61
LIG1-203ENST00000536218 RNF183Q96D59 192 aa11.22□□□□□ -0.61
LIG1-203ENST00000536218 AP5S1Q9NUS5 200 aa11.22□□□□□ -0.61
LIG1-203ENST00000536218 SLC25A10Q9UBX3 287 aaPredicted RBP11.22□□□□□ -0.61
LIG1-203ENST00000536218 JPT1Q9UK76 154 aa11.22□□□□□ -0.61
LIG1-203ENST00000536218 INSIG2Q9Y5U4 225 aa11.22□□□□□ -0.61
LIG1-203ENST00000536218 A0A1B0GXF2 115 aa11.22□□□□□ -0.61
LIG1-203ENST00000536218 FXYD7P58549 80 aa11.22□□□□□ -0.61
LIG1-203ENST00000536218 C5orf64Q2M2E5 130 aa11.22□□□□□ -0.61
LIG1-203ENST00000536218 C17orf58Q2M2W7 97 aa11.22□□□□□ -0.61
LIG1-203ENST00000536218 BOD1L2Q8IYS8 172 aa11.22□□□□□ -0.61
LIG1-203ENST00000536218 BCL6BQ8N143 479 aaPredicted RBP11.22□□□□□ -0.61
LIG1-203ENST00000536218 GAFA1Q96PS6 74 aa11.22□□□□□ -0.61
LIG1-203ENST00000536218 ZNF747Q9BV97 191 aa11.22□□□□□ -0.61
LIG1-203ENST00000536218 SSUH2Q9Y2M2 353 aa11.22□□□□□ -0.61
LIG1-203ENST00000536218 PRSS46E5RG02 174 aa11.21□□□□□ -0.61
LIG1-203ENST00000536218 SPINK8P0C7L1 97 aa11.21□□□□□ -0.61
LIG1-203ENST00000536218 GATA4P43694 442 aa11.21□□□□□ -0.61
LIG1-203ENST00000536218 VDAC2P45880 294 aaPredicted RBP11.21□□□□□ -0.61
LIG1-203ENST00000536218 FXYD2P54710 66 aa11.21□□□□□ -0.61
LIG1-203ENST00000536218 ERVK-16P61578 105 aa11.21□□□□□ -0.61
LIG1-203ENST00000536218 ATP5L2Q7Z4Y8 100 aa11.21□□□□□ -0.61
LIG1-203ENST00000536218 PRSS3P2Q8NHM4 247 aa11.21□□□□□ -0.61
LIG1-203ENST00000536218 C18orf15Q96N68 181 aa11.21□□□□□ -0.61
LIG1-203ENST00000536218 NHP2Q9NX24 153 aaKnown RBP11.21□□□□□ -0.61
LIG1-203ENST00000536218 FAM90A27PA6NNH2 459 aa11.21□□□□□ -0.62
LIG1-203ENST00000536218 C17orf100A8MU93 164 aa11.21□□□□□ -0.62
LIG1-203ENST00000536218 CT45A1Q5HYN5 189 aa11.21□□□□□ -0.62
LIG1-203ENST00000536218 OR4X2Q8NGF9 303 aa11.21□□□□□ -0.62
LIG1-203ENST00000536218 CT45A3Q8NHU0 189 aa11.21□□□□□ -0.62
LIG1-203ENST00000536218 LINC01560Q8TB33 94 aa11.21□□□□□ -0.62
LIG1-203ENST00000536218 C20orf78Q9BR46 151 aa11.21□□□□□ -0.62
LIG1-203ENST00000536218 IFI27L2Q9H2X8 130 aa11.21□□□□□ -0.62
LIG1-203ENST00000536218 ENY2Q9NPA8 101 aa11.21□□□□□ -0.62
LIG1-203ENST00000536218 TCF19Q9Y242 345 aa11.21□□□□□ -0.62
LIG1-203ENST00000536218 MSRB2Q9Y3D2 182 aa11.21□□□□□ -0.62
LIG1-203ENST00000536218 ARFGEF3Q5TH69 2177 aa11.21□□□□□ -0.62
LIG1-203ENST00000536218 PYYP10082 97 aa11.2□□□□□ -0.62
LIG1-203ENST00000536218 CACNG7P62955 275 aa11.2□□□□□ -0.62
LIG1-203ENST00000536218 PRR20EP86478 221 aa11.2□□□□□ -0.62
LIG1-203ENST00000536218 PRR20CP86479 221 aa11.2□□□□□ -0.62
LIG1-203ENST00000536218 PRR20DP86480 221 aa11.2□□□□□ -0.62
LIG1-203ENST00000536218 PRR20BP86481 221 aa11.2□□□□□ -0.62
LIG1-203ENST00000536218 PRR20AP86496 221 aa11.2□□□□□ -0.62
LIG1-203ENST00000536218 NUP37Q8NFH4 326 aa11.2□□□□□ -0.62
LIG1-203ENST00000536218 OR9G4Q8NGQ1 327 aa11.2□□□□□ -0.62
LIG1-203ENST00000536218 S1PR3Q99500 378 aa11.2□□□□□ -0.62
LIG1-203ENST00000536218 HCFC1P51610 2035 aa11.2□□□□□ -0.62
LIG1-203ENST00000536218 TNFRSF1AP19438 455 aa11.2□□□□□ -0.62
LIG1-203ENST00000536218 PPIFP30405 207 aaKnown RBP11.2□□□□□ -0.62
LIG1-203ENST00000536218 CSN1S1P47710 185 aa11.2□□□□□ -0.62
LIG1-203ENST00000536218 SRSF8Q9BRL6 282 aaKnown RBP11.2□□□□□ -0.62
LIG1-203ENST00000536218 ANKHD1Q8IWZ3 2542 aaKnown RBP11.2□□□□□ -0.62
LIG1-203ENST00000536218 FOXI2Q6ZQN5 318 aa11.2□□□□□ -0.62
LIG1-203ENST00000536218 FAM231DQ6ZW35 169 aa11.2□□□□□ -0.62
LIG1-203ENST00000536218 ZNF479Q96JC4 524 aa11.2□□□□□ -0.62
LIG1-203ENST00000536218 DYNLRB1Q9NP97 96 aa11.2□□□□□ -0.62
LIG1-203ENST00000536218 LOC389332A0A1B0GUA5 103 aa11.19□□□□□ -0.62
LIG1-203ENST00000536218 PEX7O00628 323 aa11.19□□□□□ -0.62
LIG1-203ENST00000536218 SLC25A17O43808 307 aa11.19□□□□□ -0.62
LIG1-203ENST00000536218 TMPRSS3P57727 454 aa11.19□□□□□ -0.62
LIG1-203ENST00000536218 MORN5Q5VZ52 161 aa11.19□□□□□ -0.62
LIG1-203ENST00000536218 PSG8Q9UQ74 426 aa11.19□□□□□ -0.62
LIG1-203ENST00000536218 SAA2P0DJI9 122 aaPredicted RBP11.19□□□□□ -0.62
LIG1-203ENST00000536218 C8orf88P0DMB2 117 aa11.19□□□□□ -0.62
LIG1-203ENST00000536218 MYOD1P15172 320 aa11.19□□□□□ -0.62
LIG1-203ENST00000536218 GRNP28799 593 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms