RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 PDCD10Q9BUL8 212 aa5.48□□□□□ -1.53
CLIP1-206ENST00000535290 CHAC1Q9BUX1 264 aa5.48□□□□□ -1.53
CLIP1-206ENST00000535290 S100A14Q9HCY8 104 aa5.48□□□□□ -1.53
CLIP1-206ENST00000535290 RHBDL2Q9NX52 303 aa5.48□□□□□ -1.53
CLIP1-206ENST00000535290 ICOSQ9Y6W8 199 aa5.48□□□□□ -1.53
CLIP1-206ENST00000535290 H7BYZ3 331 aa5.47□□□□□ -1.53
CLIP1-206ENST00000535290 PAX4O43316 350 aa5.47□□□□□ -1.53
CLIP1-206ENST00000535290 ZNF324O75467 553 aaPredicted RBP5.47□□□□□ -1.53
CLIP1-206ENST00000535290 IGLV2-8P01709 118 aa5.47□□□□□ -1.53
CLIP1-206ENST00000535290 ZNF182P17025 639 aaPredicted RBP5.47□□□□□ -1.53
CLIP1-206ENST00000535290 MEOX2P50222 304 aa5.47□□□□□ -1.53
CLIP1-206ENST00000535290 LYZP61626 148 aa5.47□□□□□ -1.53
CLIP1-206ENST00000535290 RHOBP62745 196 aa5.47□□□□□ -1.53
CLIP1-206ENST00000535290 HIST1H1AQ02539 215 aaPredicted RBP5.47□□□□□ -1.53
CLIP1-206ENST00000535290 ZNF90Q03938 601 aa5.47□□□□□ -1.53
CLIP1-206ENST00000535290 C2orf83Q53S99 150 aa5.47□□□□□ -1.53
CLIP1-206ENST00000535290 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.47□□□□□ -1.53
CLIP1-206ENST00000535290 ARRDC1Q8N5I2 433 aa5.47□□□□□ -1.53
CLIP1-206ENST00000535290 RNASEH2CQ8TDP1 164 aaKnown RBP5.47□□□□□ -1.53
CLIP1-206ENST00000535290 IL22RA2Q969J5 263 aa5.47□□□□□ -1.53
CLIP1-206ENST00000535290 RAB24Q969Q5 203 aa5.47□□□□□ -1.53
CLIP1-206ENST00000535290 PPP1R14BQ96C90 147 aa5.47□□□□□ -1.53
CLIP1-206ENST00000535290 SLC25A32Q9H2D1 315 aa5.47□□□□□ -1.53
CLIP1-206ENST00000535290 AUNIPQ9H7T9 357 aa5.47□□□□□ -1.53
CLIP1-206ENST00000535290 TRGV2A0A075B6R0 118 aa5.46□□□□□ -1.54
CLIP1-206ENST00000535290 A0A0G2JRQ6 117 aa5.46□□□□□ -1.54
CLIP1-206ENST00000535290 SNURFLB1AK76 121 aa5.46□□□□□ -1.54
CLIP1-206ENST00000535290 OR5AC1P0C628 307 aa5.46□□□□□ -1.54
CLIP1-206ENST00000535290 CBX5P45973 191 aa5.46□□□□□ -1.54
CLIP1-206ENST00000535290 AKR1C2P52895 323 aa5.46□□□□□ -1.54
CLIP1-206ENST00000535290 CCDC28AQ8IWP9 274 aa5.46□□□□□ -1.54
CLIP1-206ENST00000535290 LRTM2Q8N967 370 aa5.46□□□□□ -1.54
CLIP1-206ENST00000535290 OR5H6Q8NGV6 325 aa5.46□□□□□ -1.54
CLIP1-206ENST00000535290 SLC25A38Q96DW6 304 aa5.46□□□□□ -1.54
CLIP1-206ENST00000535290 MGLLQ99685 303 aa5.46□□□□□ -1.54
CLIP1-206ENST00000535290 DNAJC4Q9NNZ3 241 aa5.46□□□□□ -1.54
CLIP1-206ENST00000535290 IGKV1D-37A0A075B6S9 117 aa5.45□□□□□ -1.54
CLIP1-206ENST00000535290 PRAF2O60831 178 aa5.45□□□□□ -1.54
CLIP1-206ENST00000535290 CDKN1BP46527 198 aa5.45□□□□□ -1.54
CLIP1-206ENST00000535290 GALR1P47211 349 aa5.45□□□□□ -1.54
CLIP1-206ENST00000535290 RPL37AP61513 92 aaKnown RBP5.45□□□□□ -1.54
CLIP1-206ENST00000535290 DAZ2Q13117 558 aaKnown RBP5.45□□□□□ -1.54
CLIP1-206ENST00000535290 OR2F1Q13607 317 aa5.45□□□□□ -1.54
CLIP1-206ENST00000535290 KLF9Q13886 244 aaPredicted RBP5.45□□□□□ -1.54
CLIP1-206ENST00000535290 MRPL23Q16540 153 aaKnown RBP5.45□□□□□ -1.54
CLIP1-206ENST00000535290 IDNKQ5T6J7 187 aa5.45□□□□□ -1.54
CLIP1-206ENST00000535290 LELP1Q5T871 98 aa5.45□□□□□ -1.54
CLIP1-206ENST00000535290 C22orf42Q6IC83 251 aa5.45□□□□□ -1.54
CLIP1-206ENST00000535290 ETFRF1Q6IPR1 90 aa5.45□□□□□ -1.54
CLIP1-206ENST00000535290 NEGR1Q7Z3B1 354 aa5.45□□□□□ -1.54
CLIP1-206ENST00000535290 C10orf126Q8N4M7 172 aa5.45□□□□□ -1.54
CLIP1-206ENST00000535290 ZNF738Q8NE65 137 aa5.45□□□□□ -1.54
CLIP1-206ENST00000535290 OR8A1Q8NGG7 326 aa5.45□□□□□ -1.54
CLIP1-206ENST00000535290 RRNAD1Q96FB5 475 aaKnown RBP5.45□□□□□ -1.54
CLIP1-206ENST00000535290 PARD6GQ9BYG4 376 aaPredicted RBP5.45□□□□□ -1.54
CLIP1-206ENST00000535290 SLC25A22Q9H936 323 aa5.45□□□□□ -1.54
CLIP1-206ENST00000535290 Q9HAA7 133 aa5.45□□□□□ -1.54
CLIP1-206ENST00000535290 HEYLQ9NQ87 328 aaPredicted RBP5.45□□□□□ -1.54
CLIP1-206ENST00000535290 PPP1R14DQ9NXH3 145 aa5.45□□□□□ -1.54
CLIP1-206ENST00000535290 RCL1Q9Y2P8 373 aaKnown RBP5.45□□□□□ -1.54
CLIP1-206ENST00000535290 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.44□□□□□ -1.54
CLIP1-206ENST00000535290 TRDV1A0A1B0GX56 115 aa5.44□□□□□ -1.54
CLIP1-206ENST00000535290 SNRPGP15A8MWD9 76 aa5.44□□□□□ -1.54
CLIP1-206ENST00000535290 ATP5HO75947 161 aa5.44□□□□□ -1.54
CLIP1-206ENST00000535290 IGHV3-53P01767 116 aa5.44□□□□□ -1.54
CLIP1-206ENST00000535290 MALP21145 153 aa5.44□□□□□ -1.54
CLIP1-206ENST00000535290 S100GP29377 79 aa5.44□□□□□ -1.54
CLIP1-206ENST00000535290 SPCS3P61009 180 aa5.44□□□□□ -1.54
CLIP1-206ENST00000535290 PSG3Q16557 428 aa5.44□□□□□ -1.54
CLIP1-206ENST00000535290 OR5H2Q8NGV7 314 aa5.44□□□□□ -1.54
CLIP1-206ENST00000535290 OR52E5Q8NH55 327 aa5.44□□□□□ -1.54
CLIP1-206ENST00000535290 TP53RKQ96S44 253 aa5.44□□□□□ -1.54
CLIP1-206ENST00000535290 IFT46Q9NQC8 304 aa5.44□□□□□ -1.54
CLIP1-206ENST00000535290 ANAPC10Q9UM13 185 aa5.44□□□□□ -1.54
CLIP1-206ENST00000535290 ZFP92A6NM28 416 aa5.43□□□□□ -1.54
CLIP1-206ENST00000535290 IBA57-AS1B1ANH7 110 aa5.43□□□□□ -1.54
CLIP1-206ENST00000535290 LECT2O14960 151 aa5.43□□□□□ -1.54
CLIP1-206ENST00000535290 GATA2P23769 480 aaPredicted RBP5.43□□□□□ -1.54
CLIP1-206ENST00000535290 CRYBA4P53673 196 aa5.43□□□□□ -1.54
CLIP1-206ENST00000535290 FGL1Q08830 312 aa5.43□□□□□ -1.54
CLIP1-206ENST00000535290 AARDQ4LEZ3 155 aa5.43□□□□□ -1.54
CLIP1-206ENST00000535290 GFI1BQ5VTD9 330 aa5.43□□□□□ -1.54
CLIP1-206ENST00000535290 LPCAT3Q6P1A2 487 aa5.43□□□□□ -1.54
CLIP1-206ENST00000535290 SPARTQ8N0X7 666 aa5.43□□□□□ -1.54
CLIP1-206ENST00000535290 TRIM63Q969Q1 353 aa5.43□□□□□ -1.54
CLIP1-206ENST00000535290 C8orf49Q96NF6 230 aa5.43□□□□□ -1.54
CLIP1-206ENST00000535290 DIABLOQ9NR28 239 aa5.43□□□□□ -1.54
CLIP1-206ENST00000535290 GSN-AS1Q9NRJ2 163 aa5.43□□□□□ -1.54
CLIP1-206ENST00000535290 PRO0255Q9UI72 69 aa5.43□□□□□ -1.54
CLIP1-206ENST00000535290 FUT9Q9Y231 359 aa5.43□□□□□ -1.54
CLIP1-206ENST00000535290 FAT4Q6V0I7 4981 aa5.42□□□□□ -1.54
CLIP1-206ENST00000535290 TRGV1A0A0A0MS02 117 aa5.42□□□□□ -1.54
CLIP1-206ENST00000535290 TRAV5A0A0B4J249 113 aa5.42□□□□□ -1.54
CLIP1-206ENST00000535290 CCNKO75909 580 aa5.42□□□□□ -1.54
CLIP1-206ENST00000535290 CXCL3P19876 107 aa5.42□□□□□ -1.54
CLIP1-206ENST00000535290 PI3P19957 117 aa5.42□□□□□ -1.54
CLIP1-206ENST00000535290 HLA-DMAP28067 261 aa5.42□□□□□ -1.54
CLIP1-206ENST00000535290 HRH1P35367 487 aa5.42□□□□□ -1.54
CLIP1-206ENST00000535290 TAS2R46P59540 309 aa5.42□□□□□ -1.54
CLIP1-206ENST00000535290 ACOT6Q3I5F7 207 aaPredicted RBP5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms