RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 HBE1P02100 147 aa7.5□□□□□ -1.21
CSDE1-217ENST00000534699 NANOS2P60321 138 aaKnown RBP7.5□□□□□ -1.21
CSDE1-217ENST00000534699 VWC2Q2TAL6 325 aa7.5□□□□□ -1.21
CSDE1-217ENST00000534699 LCN15Q6UWW0 184 aa7.5□□□□□ -1.21
CSDE1-217ENST00000534699 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.5□□□□□ -1.21
CSDE1-217ENST00000534699 MRPL53Q96EL3 112 aaKnown RBP7.5□□□□□ -1.21
CSDE1-217ENST00000534699 ODF3Q96PU9 254 aa7.5□□□□□ -1.21
CSDE1-217ENST00000534699 MAGT1Q9H0U3 335 aa7.5□□□□□ -1.21
CSDE1-217ENST00000534699 PAIP2BQ9ULR5 123 aaKnown RBP7.5□□□□□ -1.21
CSDE1-217ENST00000534699 PXMP4Q9Y6I8 212 aa7.5□□□□□ -1.21
CSDE1-217ENST00000534699 PRAF2O60831 178 aa7.49□□□□□ -1.21
CSDE1-217ENST00000534699 P0DMU3 169 aa7.49□□□□□ -1.21
CSDE1-217ENST00000534699 FAM231AP0DMU4 169 aa7.49□□□□□ -1.21
CSDE1-217ENST00000534699 FAM231CP0DMU5 169 aa7.49□□□□□ -1.21
CSDE1-217ENST00000534699 HLA-DMBP28068 263 aa7.49□□□□□ -1.21
CSDE1-217ENST00000534699 PFDN5Q99471 154 aa7.49□□□□□ -1.21
CSDE1-217ENST00000534699 GPN1Q9HCN4 374 aaPredicted RBP7.49□□□□□ -1.21
CSDE1-217ENST00000534699 LYRM9A8MSI8 78 aa7.49□□□□□ -1.21
CSDE1-217ENST00000534699 PLA2G10O15496 165 aa7.49□□□□□ -1.21
CSDE1-217ENST00000534699 ADAP1O75689 374 aa7.49□□□□□ -1.21
CSDE1-217ENST00000534699 ASAH1Q13510 395 aa7.49□□□□□ -1.21
CSDE1-217ENST00000534699 OR2F1Q13607 317 aa7.49□□□□□ -1.21
CSDE1-217ENST00000534699 FAM210AQ96ND0 272 aa7.49□□□□□ -1.21
CSDE1-217ENST00000534699 PRELID1Q9Y255 219 aa7.49□□□□□ -1.21
CSDE1-217ENST00000534699 SSSCA1O60232 199 aa7.48□□□□□ -1.21
CSDE1-217ENST00000534699 LINC00869P0C866 280 aa7.48□□□□□ -1.21
CSDE1-217ENST00000534699 S100A11P31949 105 aa7.48□□□□□ -1.21
CSDE1-217ENST00000534699 GSG1LQ6UXU4 331 aa7.48□□□□□ -1.21
CSDE1-217ENST00000534699 LINC00336Q6ZUF6 198 aa7.48□□□□□ -1.21
CSDE1-217ENST00000534699 LINC00052Q96N35 136 aa7.48□□□□□ -1.21
CSDE1-217ENST00000534699 RSG1Q9BU20 258 aa7.48□□□□□ -1.21
CSDE1-217ENST00000534699 C11orf1Q9H5F2 150 aa7.48□□□□□ -1.21
CSDE1-217ENST00000534699 KCNIP2Q9NS61 270 aa7.48□□□□□ -1.21
CSDE1-217ENST00000534699 DNAH1Q9P2D7 4330 aa7.48□□□□□ -1.21
CSDE1-217ENST00000534699 H2AFB2P0C5Z0 115 aa7.48□□□□□ -1.21
CSDE1-217ENST00000534699 HBG1P69891 147 aa7.48□□□□□ -1.21
CSDE1-217ENST00000534699 HBG2P69892 147 aa7.48□□□□□ -1.21
CSDE1-217ENST00000534699 CYCSP99999 105 aaKnown RBP7.48□□□□□ -1.21
CSDE1-217ENST00000534699 BPIFA4PQ86YQ2 179 aa7.48□□□□□ -1.21
CSDE1-217ENST00000534699 PTTG2Q9NZH5 202 aa7.48□□□□□ -1.21
CSDE1-217ENST00000534699 RCL1Q9Y2P8 373 aaKnown RBP7.48□□□□□ -1.21
CSDE1-217ENST00000534699 GOSR2O14653 212 aa7.47□□□□□ -1.21
CSDE1-217ENST00000534699 INSP01308 110 aa7.47□□□□□ -1.21
CSDE1-217ENST00000534699 MBPP02686 304 aaPredicted RBP7.47□□□□□ -1.21
CSDE1-217ENST00000534699 ORM2P19652 201 aa7.47□□□□□ -1.21
CSDE1-217ENST00000534699 ANXA7P20073 488 aaKnown RBP7.47□□□□□ -1.21
CSDE1-217ENST00000534699 PSG3Q16557 428 aa7.47□□□□□ -1.21
CSDE1-217ENST00000534699 AMTNQ6UX39 209 aa7.47□□□□□ -1.21
CSDE1-217ENST00000534699 ZNF493Q6ZR52 646 aa7.47□□□□□ -1.21
CSDE1-217ENST00000534699 ZNF709Q8N972 641 aa7.47□□□□□ -1.21
CSDE1-217ENST00000534699 BOLA2-SMG1P6H3BVE0 249 aa7.47□□□□□ -1.21
CSDE1-217ENST00000534699 RPL29P47914 159 aaKnown RBP7.47□□□□□ -1.21
CSDE1-217ENST00000534699 IL15RAQ13261 267 aa7.47□□□□□ -1.21
CSDE1-217ENST00000534699 RRN3P1Q2M238 152 aa7.47□□□□□ -1.21
CSDE1-217ENST00000534699 C12orf74Q32Q52 190 aa7.47□□□□□ -1.21
CSDE1-217ENST00000534699 RNF212Q495C1 297 aa7.47□□□□□ -1.21
CSDE1-217ENST00000534699 C15orf53Q8NAA6 179 aa7.47□□□□□ -1.21
CSDE1-217ENST00000534699 NIPSNAP3BQ9BS92 247 aa7.47□□□□□ -1.21
CSDE1-217ENST00000534699 NDUFAF3Q9BU61 184 aa7.47□□□□□ -1.21
CSDE1-217ENST00000534699 FLVCR2Q9UPI3 526 aa7.47□□□□□ -1.21
CSDE1-217ENST00000534699 DEFB131BA0A096LNP1 70 aa7.46□□□□□ -1.21
CSDE1-217ENST00000534699 Q6ZRG5 221 aa7.46□□□□□ -1.21
CSDE1-217ENST00000534699 XCL2Q9UBD3 114 aa7.46□□□□□ -1.21
CSDE1-217ENST00000534699 WDR83OSQ9Y284 106 aa7.46□□□□□ -1.21
CSDE1-217ENST00000534699 KMT2CQ8NEZ4 4911 aaKnown RBP7.46□□□□□ -1.21
CSDE1-217ENST00000534699 IGHV4-4A0A075B6R2 117 aa7.46□□□□□ -1.22
CSDE1-217ENST00000534699 SMCO3A2RU48 225 aa7.46□□□□□ -1.22
CSDE1-217ENST00000534699 MRPS12O15235 138 aaKnown RBP7.46□□□□□ -1.22
CSDE1-217ENST00000534699 SULT1A1P50225 295 aa7.46□□□□□ -1.22
CSDE1-217ENST00000534699 FAM78BQ5VT40 261 aa7.46□□□□□ -1.22
CSDE1-217ENST00000534699 STX12Q86Y82 276 aa7.46□□□□□ -1.22
CSDE1-217ENST00000534699 OR11H7Q8NGC8 314 aa7.46□□□□□ -1.22
CSDE1-217ENST00000534699 SLC25A31Q9H0C2 315 aa7.46□□□□□ -1.22
CSDE1-217ENST00000534699 ARV1Q9H2C2 271 aa7.46□□□□□ -1.22
CSDE1-217ENST00000534699 LYRM2Q9NU23 88 aaPredicted RBP7.46□□□□□ -1.22
CSDE1-217ENST00000534699 TMEM14CQ9P0S9 112 aa7.46□□□□□ -1.22
CSDE1-217ENST00000534699 DKK2Q9UBU2 259 aa7.46□□□□□ -1.22
CSDE1-217ENST00000534699 FAM240BA0A1B0GVZ2 78 aa7.45□□□□□ -1.22
CSDE1-217ENST00000534699 AGPAT2O15120 278 aa7.45□□□□□ -1.22
CSDE1-217ENST00000534699 METTL15P1P0C7V9 234 aa7.45□□□□□ -1.22
CSDE1-217ENST00000534699 SLC38A11Q08AI6 406 aa7.45□□□□□ -1.22
CSDE1-217ENST00000534699 UQCC1Q9NVA1 299 aa7.45□□□□□ -1.22
CSDE1-217ENST00000534699 TRAV8-2A0A0B4J237 113 aa7.45□□□□□ -1.22
CSDE1-217ENST00000534699 C7orf66A4D0T2 115 aa7.45□□□□□ -1.22
CSDE1-217ENST00000534699 COX7A2P2O60397 106 aa7.45□□□□□ -1.22
CSDE1-217ENST00000534699 RLN2P04090 185 aa7.45□□□□□ -1.22
CSDE1-217ENST00000534699 OR5G3P0C626 314 aa7.45□□□□□ -1.22
CSDE1-217ENST00000534699 PDE6HQ13956 83 aa7.45□□□□□ -1.22
CSDE1-217ENST00000534699 OR4B1Q8NGF8 309 aa7.45□□□□□ -1.22
CSDE1-217ENST00000534699 OR8A1Q8NGG7 326 aa7.45□□□□□ -1.22
CSDE1-217ENST00000534699 C17orf77Q96MU5 243 aa7.45□□□□□ -1.22
CSDE1-217ENST00000534699 LINC00467Q9BRT7 94 aa7.45□□□□□ -1.22
CSDE1-217ENST00000534699 NMES1Q9C002 83 aa7.45□□□□□ -1.22
CSDE1-217ENST00000534699 DNAJC4Q9NNZ3 241 aa7.45□□□□□ -1.22
CSDE1-217ENST00000534699 TAS2R60P59551 318 aa7.45□□□□□ -1.22
CSDE1-217ENST00000534699 PRR20EP86478 221 aa7.45□□□□□ -1.22
CSDE1-217ENST00000534699 PRR20CP86479 221 aa7.45□□□□□ -1.22
CSDE1-217ENST00000534699 PRR20DP86480 221 aa7.45□□□□□ -1.22
CSDE1-217ENST00000534699 PRR20BP86481 221 aa7.45□□□□□ -1.22
CSDE1-217ENST00000534699 PRR20AP86496 221 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms