RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 NRN1Q9NPD7 142 aa10.37□□□□□ -0.75
VPS11-205ENST00000534551 SLC39A9Q9NUM3 307 aa10.37□□□□□ -0.75
VPS11-205ENST00000534551 FBXL17Q9UF56 701 aa10.37□□□□□ -0.75
VPS11-205ENST00000534551 RNF222A6NCQ9 220 aa10.36□□□□□ -0.75
VPS11-205ENST00000534551 PSMG4Q5JS54 123 aa10.36□□□□□ -0.75
VPS11-205ENST00000534551 C1orf194Q5T5A4 169 aa10.36□□□□□ -0.75
VPS11-205ENST00000534551 IGFL4Q6B9Z1 124 aa10.36□□□□□ -0.75
VPS11-205ENST00000534551 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.36□□□□□ -0.75
VPS11-205ENST00000534551 LINC00305Q7Z4B0 112 aa10.36□□□□□ -0.75
VPS11-205ENST00000534551 LOC102724200A0A096LPH7 203 aaPredicted RBP10.35□□□□□ -0.75
VPS11-205ENST00000534551 TRAV5A0A0B4J249 113 aa10.35□□□□□ -0.75
VPS11-205ENST00000534551 RPL29P47914 159 aaKnown RBP10.35□□□□□ -0.75
VPS11-205ENST00000534551 RAB31Q13636 194 aa10.35□□□□□ -0.75
VPS11-205ENST00000534551 SPATA31B1PQ5VZV4 182 aa10.35□□□□□ -0.75
VPS11-205ENST00000534551 C20orf173Q96LM9 149 aa10.35□□□□□ -0.75
VPS11-205ENST00000534551 TM2D3Q9BRN9 247 aa10.35□□□□□ -0.75
VPS11-205ENST00000534551 NBEAL2Q6ZNJ1 2754 aa10.34□□□□□ -0.75
VPS11-205ENST00000534551 H3BTX0 84 aa10.34□□□□□ -0.75
VPS11-205ENST00000534551 MRPS12O15235 138 aaKnown RBP10.34□□□□□ -0.75
VPS11-205ENST00000534551 EIF3GO75821 320 aaKnown RBP eCLIP10.34□□□□□ -0.75
VPS11-205ENST00000534551 FGL1Q08830 312 aa10.34□□□□□ -0.75
VPS11-205ENST00000534551 C10orf113Q5VZT2 155 aa10.34□□□□□ -0.75
VPS11-205ENST00000534551 RCHY1Q96PM5 261 aa10.34□□□□□ -0.75
VPS11-205ENST00000534551 AQP10Q96PS8 301 aa10.34□□□□□ -0.75
VPS11-205ENST00000534551 PFDN2Q9UHV9 154 aa10.34□□□□□ -0.75
VPS11-205ENST00000534551 hCG_2014768A0A024R1R8 64 aa10.33□□□□□ -0.76
VPS11-205ENST00000534551 MPDU1O75352 247 aa10.33□□□□□ -0.76
VPS11-205ENST00000534551 HLA-DMBP28068 263 aa10.33□□□□□ -0.76
VPS11-205ENST00000534551 GALR1P47211 349 aa10.33□□□□□ -0.76
VPS11-205ENST00000534551 AP2S1P53680 142 aaPredicted RBP10.33□□□□□ -0.76
VPS11-205ENST00000534551 ACTL10Q5JWF8 245 aa10.33□□□□□ -0.76
VPS11-205ENST00000534551 GDF5OSQ5U4N7 250 aa10.33□□□□□ -0.76
VPS11-205ENST00000534551 LINC00052Q96N35 136 aa10.33□□□□□ -0.76
VPS11-205ENST00000534551 U3KQK5 164 aa10.33□□□□□ -0.76
VPS11-205ENST00000534551 TRAV8-2A0A0B4J237 113 aa10.32□□□□□ -0.76
VPS11-205ENST00000534551 F6UB75 175 aa10.32□□□□□ -0.76
VPS11-205ENST00000534551 ATF4P18848 351 aaPredicted RBP10.32□□□□□ -0.76
VPS11-205ENST00000534551 DEFB135Q30KP9 77 aa10.32□□□□□ -0.76
VPS11-205ENST00000534551 PXDC1Q5TGL8 231 aa10.32□□□□□ -0.76
VPS11-205ENST00000534551 Q6ZRG5 221 aa10.32□□□□□ -0.76
VPS11-205ENST00000534551 MIR17HGQ75NE6 70 aa10.32□□□□□ -0.76
VPS11-205ENST00000534551 RNF182Q8N6D2 247 aa10.32□□□□□ -0.76
VPS11-205ENST00000534551 ASB13Q8WXK3 278 aa10.32□□□□□ -0.76
VPS11-205ENST00000534551 TNFSF18Q9UNG2 199 aa10.32□□□□□ -0.76
VPS11-205ENST00000534551 SLC17A3O00476 420 aa10.31□□□□□ -0.76
VPS11-205ENST00000534551 ARPC5O15511 151 aa10.31□□□□□ -0.76
VPS11-205ENST00000534551 RPL7P18124 248 aaKnown RBP10.31□□□□□ -0.76
VPS11-205ENST00000534551 C4BPBP20851 252 aa10.31□□□□□ -0.76
VPS11-205ENST00000534551 PSMB3P49720 205 aa10.31□□□□□ -0.76
VPS11-205ENST00000534551 FFAR4Q5NUL3 377 aa10.31□□□□□ -0.76
VPS11-205ENST00000534551 Q6ZNX1 250 aa10.31□□□□□ -0.76
VPS11-205ENST00000534551 TRPT1Q86TN4 253 aaKnown RBP10.31□□□□□ -0.76
VPS11-205ENST00000534551 OR1L4Q8NGR5 311 aa10.31□□□□□ -0.76
VPS11-205ENST00000534551 C16orf92Q96LL3 132 aa10.31□□□□□ -0.76
VPS11-205ENST00000534551 SPATA25Q9BR10 227 aa10.31□□□□□ -0.76
VPS11-205ENST00000534551 DNAJC4Q9NNZ3 241 aa10.31□□□□□ -0.76
VPS11-205ENST00000534551 STAB2Q8WWQ8 2551 aa10.3□□□□□ -0.76
VPS11-205ENST00000534551 ELOA3CA0A087WX78 387 aaPredicted RBP10.3□□□□□ -0.76
VPS11-205ENST00000534551 A0A087X0K7 114 aa10.3□□□□□ -0.76
VPS11-205ENST00000534551 IFNA5P01569 189 aa10.3□□□□□ -0.76
VPS11-205ENST00000534551 NHLRC4P0CG21 123 aaPredicted RBP10.3□□□□□ -0.76
VPS11-205ENST00000534551 PYYP10082 97 aa10.3□□□□□ -0.76
VPS11-205ENST00000534551 SNRPD3P62318 126 aaKnown RBP10.3□□□□□ -0.76
VPS11-205ENST00000534551 FAM78BQ5VT40 261 aa10.3□□□□□ -0.76
VPS11-205ENST00000534551 STHQ8IWL8 128 aa10.3□□□□□ -0.76
VPS11-205ENST00000534551 ZNF709Q8N972 641 aa10.3□□□□□ -0.76
VPS11-205ENST00000534551 HSD17B11Q8NBQ5 300 aa10.3□□□□□ -0.76
VPS11-205ENST00000534551 OR11H4Q8NGC9 324 aa10.3□□□□□ -0.76
VPS11-205ENST00000534551 SCGB1C1Q8TD33 95 aa10.3□□□□□ -0.76
VPS11-205ENST00000534551 PFDN5Q99471 154 aa10.3□□□□□ -0.76
VPS11-205ENST00000534551 SH3BGRL3Q9H299 93 aa10.3□□□□□ -0.76
VPS11-205ENST00000534551 SEPSECSQ9HD40 501 aaKnown RBP10.3□□□□□ -0.76
VPS11-205ENST00000534551 H3BQ15 152 aa10.29□□□□□ -0.76
VPS11-205ENST00000534551 ISLRO14498 428 aa10.29□□□□□ -0.76
VPS11-205ENST00000534551 IGKV3-20P01619 116 aa10.29□□□□□ -0.76
VPS11-205ENST00000534551 IGLC2P0DOY2 106 aa10.29□□□□□ -0.76
VPS11-205ENST00000534551 S100A7P31151 101 aa10.29□□□□□ -0.76
VPS11-205ENST00000534551 APOC4P55056 127 aa10.29□□□□□ -0.76
VPS11-205ENST00000534551 CMC4P56277 68 aaPredicted RBP10.29□□□□□ -0.76
VPS11-205ENST00000534551 GPR82Q96P67 336 aa10.29□□□□□ -0.76
VPS11-205ENST00000534551 SLC25A2Q9BXI2 301 aa10.29□□□□□ -0.76
VPS11-205ENST00000534551 ZMAT4Q9H898 229 aa10.29□□□□□ -0.76
VPS11-205ENST00000534551 DNAH7Q8WXX0 4024 aa10.29□□□□□ -0.76
VPS11-205ENST00000534551 C17orf112F2Z3M2 114 aa10.28□□□□□ -0.76
VPS11-205ENST00000534551 CA1P00915 261 aaPredicted RBP10.28□□□□□ -0.76
VPS11-205ENST00000534551 GIG44P09565 113 aaPredicted RBP10.28□□□□□ -0.76
VPS11-205ENST00000534551 ZNF705DP0CH99 300 aaPredicted RBP10.28□□□□□ -0.76
VPS11-205ENST00000534551 ZNF705BP0CI00 300 aaPredicted RBP10.28□□□□□ -0.76
VPS11-205ENST00000534551 MEOX2P50222 304 aa10.28□□□□□ -0.76
VPS11-205ENST00000534551 RAB2AP61019 212 aa10.28□□□□□ -0.76
VPS11-205ENST00000534551 RPL7L1Q6DKI1 246 aaKnown RBP10.28□□□□□ -0.76
VPS11-205ENST00000534551 INO80EQ8NBZ0 244 aaPredicted RBP10.28□□□□□ -0.76
VPS11-205ENST00000534551 GATAD1Q8WUU5 269 aa10.28□□□□□ -0.76
VPS11-205ENST00000534551 FAM167A-AS1Q96KT0 104 aa10.28□□□□□ -0.76
VPS11-205ENST00000534551 PARD6GQ9BYG4 376 aaPredicted RBP10.28□□□□□ -0.76
VPS11-205ENST00000534551 KCNIP2Q9NS61 270 aa10.28□□□□□ -0.76
VPS11-205ENST00000534551 ZNF586Q9NXT0 402 aa10.28□□□□□ -0.76
VPS11-205ENST00000534551 A0A1B0GVG6 124 aa10.27□□□□□ -0.77
VPS11-205ENST00000534551 H3BMM0 161 aa10.27□□□□□ -0.77
VPS11-205ENST00000534551 HLA-DRB4P13762 266 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms