RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 SPRY2O43597 315 aa15□□□□□ -0.01
CCS-208ENST00000533244 OR5G3P0C626 314 aa15□□□□□ -0.01
CCS-208ENST00000533244 MEOX2P50222 304 aa15□□□□□ -0.01
CCS-208ENST00000533244 RAB31Q13636 194 aa15□□□□□ -0.01
CCS-208ENST00000533244 C3orf84H3BNL1 204 aa14.99□□□□□ -0.01
CCS-208ENST00000533244 ISLRO14498 428 aa14.99□□□□□ -0.01
CCS-208ENST00000533244 CXCL3P19876 107 aa14.99□□□□□ -0.01
CCS-208ENST00000533244 BAXQ07812 192 aa14.99□□□□□ -0.01
CCS-208ENST00000533244 ACTL10Q5JWF8 245 aa14.99□□□□□ -0.01
CCS-208ENST00000533244 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.99□□□□□ -0.01
CCS-208ENST00000533244 S100A7AQ86SG5 101 aa14.99□□□□□ -0.01
CCS-208ENST00000533244 PET100P0DJ07 73 aa14.98□□□□□ -0.01
CCS-208ENST00000533244 ID1P41134 155 aa14.98□□□□□ -0.01
CCS-208ENST00000533244 OPCMLQ14982 345 aa14.98□□□□□ -0.01
CCS-208ENST00000533244 OR5C1Q8NGR4 320 aa14.98□□□□□ -0.01
CCS-208ENST00000533244 TMEM37Q8WXS4 190 aa14.98□□□□□ -0.01
CCS-208ENST00000533244 RSG1Q9BU20 258 aa14.98□□□□□ -0.01
CCS-208ENST00000533244 GIG44P09565 113 aaPredicted RBP14.97□□□□□ -0.01
CCS-208ENST00000533244 SPP1P10451 314 aa14.97□□□□□ -0.01
CCS-208ENST00000533244 RPL7P18124 248 aaKnown RBP14.97□□□□□ -0.01
CCS-208ENST00000533244 RPL29P47914 159 aaKnown RBP14.97□□□□□ -0.01
CCS-208ENST00000533244 MIC13Q5XKP0 118 aa14.97□□□□□ -0.01
CCS-208ENST00000533244 MORN3Q6PF18 240 aaPredicted RBP14.97□□□□□ -0.01
CCS-208ENST00000533244 RNF24Q9Y225 148 aa14.97□□□□□ -0.01
CCS-208ENST00000533244 ELOA3CA0A087WX78 387 aaPredicted RBP14.96□□□□□ -0.01
CCS-208ENST00000533244 MRPS12O15235 138 aaKnown RBP14.96□□□□□ -0.01
CCS-208ENST00000533244 MPDU1O75352 247 aa14.96□□□□□ -0.01
CCS-208ENST00000533244 CA1P00915 261 aaPredicted RBP14.96□□□□□ -0.01
CCS-208ENST00000533244 LYL1P12980 280 aa14.96□□□□□ -0.01
CCS-208ENST00000533244 RGS21Q2M5E4 152 aa14.96□□□□□ -0.01
CCS-208ENST00000533244 LINC00305Q7Z4B0 112 aa14.96□□□□□ -0.01
CCS-208ENST00000533244 OR11H7Q8NGC8 314 aa14.96□□□□□ -0.01
CCS-208ENST00000533244 GATAD1Q8WUU5 269 aa14.96□□□□□ -0.01
CCS-208ENST00000533244 CSMD3Q7Z407 3707 aa14.95□□□□□ -0.02
CCS-208ENST00000533244 A0A087X0K7 114 aa14.95□□□□□ -0.02
CCS-208ENST00000533244 H3BMM0 161 aa14.95□□□□□ -0.02
CCS-208ENST00000533244 COX7A2P2O60397 106 aa14.95□□□□□ -0.02
CCS-208ENST00000533244 HLA-DRB4P13762 266 aa14.95□□□□□ -0.02
CCS-208ENST00000533244 FGF7P21781 194 aa14.95□□□□□ -0.02
CCS-208ENST00000533244 FCN2Q15485 313 aa14.95□□□□□ -0.02
CCS-208ENST00000533244 MBD2Q9UBB5 411 aa14.95□□□□□ -0.02
CCS-208ENST00000533244 HLA-DRB4X5D2U9 266 aa14.95□□□□□ -0.02
CCS-208ENST00000533244 C4BPBP20851 252 aa14.94□□□□□ -0.02
CCS-208ENST00000533244 OXA1LQ15070 435 aa14.94□□□□□ -0.02
CCS-208ENST00000533244 TMEM41BQ5BJD5 291 aa14.94□□□□□ -0.02
CCS-208ENST00000533244 FOXI2Q6ZQN5 318 aa14.94□□□□□ -0.02
CCS-208ENST00000533244 Q6ZRG5 221 aa14.94□□□□□ -0.02
CCS-208ENST00000533244 C16orf92Q96LL3 132 aa14.94□□□□□ -0.02
CCS-208ENST00000533244 NPCDR1Q9BY65 106 aa14.94□□□□□ -0.02
CCS-208ENST00000533244 MED28Q9H204 178 aa14.94□□□□□ -0.02
CCS-208ENST00000533244 SAV1Q9H4B6 383 aaPredicted RBP14.94□□□□□ -0.02
CCS-208ENST00000533244 SLC39A9Q9NUM3 307 aa14.94□□□□□ -0.02
CCS-208ENST00000533244 DEFB1P60022 68 aa14.93□□□□□ -0.02
CCS-208ENST00000533244 B2MP61769 119 aa14.93□□□□□ -0.02
CCS-208ENST00000533244 GDF5OSQ5U4N7 250 aa14.93□□□□□ -0.02
CCS-208ENST00000533244 MORN5Q5VZ52 161 aa14.93□□□□□ -0.02
CCS-208ENST00000533244 C10orf113Q5VZT2 155 aa14.93□□□□□ -0.02
CCS-208ENST00000533244 C20orf173Q96LM9 149 aa14.93□□□□□ -0.02
CCS-208ENST00000533244 LINC00052Q96N35 136 aa14.93□□□□□ -0.02
CCS-208ENST00000533244 CLUHP3Q96NS8 147 aa14.93□□□□□ -0.02
CCS-208ENST00000533244 DNAJC4Q9NNZ3 241 aa14.93□□□□□ -0.02
CCS-208ENST00000533244 HSPB11Q9Y547 144 aa14.93□□□□□ -0.02
CCS-208ENST00000533244 PXMP4Q9Y6I8 212 aa14.93□□□□□ -0.02
CCS-208ENST00000533244 KMT2CQ8NEZ4 4911 aaKnown RBP14.93□□□□□ -0.02
CCS-208ENST00000533244 TRAV8-2A0A0B4J237 113 aa14.92□□□□□ -0.02
CCS-208ENST00000533244 ATF4P18848 351 aaPredicted RBP14.92□□□□□ -0.02
CCS-208ENST00000533244 CLINT1Q14677 625 aa14.92□□□□□ -0.02
CCS-208ENST00000533244 OR1L4Q8NGR5 311 aa14.92□□□□□ -0.02
CCS-208ENST00000533244 THAP6Q8TBB0 222 aa14.92□□□□□ -0.02
CCS-208ENST00000533244 PFDN5Q99471 154 aa14.92□□□□□ -0.02
CCS-208ENST00000533244 STARD9Q9P2P6 4700 aa14.92□□□□□ -0.02
CCS-208ENST00000533244 RPL12P30050 165 aaKnown RBP14.92□□□□□ -0.02
CCS-208ENST00000533244 CASC10Q5T4H9 136 aa14.92□□□□□ -0.02
CCS-208ENST00000533244 SPATA31B1PQ5VZV4 182 aa14.92□□□□□ -0.02
CCS-208ENST00000533244 WDR61Q9GZS3 305 aaKnown RBP14.92□□□□□ -0.02
CCS-208ENST00000533244 RPRMQ9NS64 109 aa14.92□□□□□ -0.02
CCS-208ENST00000533244 CSNK1G2-AS1Q8NCQ2 148 aa14.91□□□□□ -0.02
CCS-208ENST00000533244 ATP5SQ99766 215 aa14.91□□□□□ -0.02
CCS-208ENST00000533244 A0A0J9YWU9 116 aa14.9□□□□□ -0.02
CCS-208ENST00000533244 A0A0J9YX75 114 aa14.9□□□□□ -0.02
CCS-208ENST00000533244 CXCL2P19875 107 aa14.9□□□□□ -0.02
CCS-208ENST00000533244 BPIFA4PQ86YQ2 179 aa14.9□□□□□ -0.02
CCS-208ENST00000533244 ASB13Q8WXK3 278 aa14.9□□□□□ -0.02
CCS-208ENST00000533244 RARRES2Q99969 163 aa14.9□□□□□ -0.02
CCS-208ENST00000533244 A8MTW9 85 aa14.89□□□□□ -0.03
CCS-208ENST00000533244 F6UB75 175 aa14.89□□□□□ -0.03
CCS-208ENST00000533244 OR11H2Q8NH07 326 aa14.89□□□□□ -0.03
CCS-208ENST00000533244 GIPP09681 153 aaPredicted RBP14.88□□□□□ -0.03
CCS-208ENST00000533244 IGLC2P0DOY2 106 aa14.88□□□□□ -0.03
CCS-208ENST00000533244 NUTF2P61970 127 aaKnown RBP14.88□□□□□ -0.03
CCS-208ENST00000533244 FGL1Q08830 312 aa14.88□□□□□ -0.03
CCS-208ENST00000533244 IGFL4Q6B9Z1 124 aa14.88□□□□□ -0.03
CCS-208ENST00000533244 IL17DQ8TAD2 202 aa14.88□□□□□ -0.03
CCS-208ENST00000533244 ZNF705EA8MWA4 302 aaPredicted RBP14.87□□□□□ -0.03
CCS-208ENST00000533244 GCSAMLQ5JQS6 135 aa14.87□□□□□ -0.03
CCS-208ENST00000533244 EBLN2Q6P2I7 272 aa14.87□□□□□ -0.03
CCS-208ENST00000533244 LCN15Q6UWW0 184 aa14.87□□□□□ -0.03
CCS-208ENST00000533244 RNF182Q8N6D2 247 aa14.87□□□□□ -0.03
CCS-208ENST00000533244 C1QTNF4Q9BXJ3 329 aa14.87□□□□□ -0.03
CCS-208ENST00000533244 KCNIP2Q9NS61 270 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms